RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 ATOX1O00244 68 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 IGLV3-21P80748 117 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-210ENST00000471181 LYPD2Q6UXB3 125 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 FAM110AQ9BQ89 295 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 CFHR1Q03591 330 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 LY6G6FQ5SQ64 297 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 TEX36Q5VZQ5 186 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 LY96Q9Y6Y9 160 aa5.53□□□□□ -1.52
BRCA1-210ENST00000471181 FGF16O43320 207 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 NPSP0C0P6 89 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 CFC1BP0CG36 223 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 CFC1P0CG37 223 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 LINC00205P59089 165 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 C8orf86Q6ZUL3 223 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 CTHRC1Q96CG8 243 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 KNTC1P50748 2209 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 SMIM10L1P0DMW3 83 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 ZNF134P52741 427 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 CCL18P55774 89 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 C12orf74Q32Q52 190 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 SMIM10Q96HG1 83 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 PRR15LQ9BU68 103 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 USP17L23D6RBM5 183 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 PYY3Q5JQD4 70 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 ARTNQ5T4W7 220 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 PAQR4Q8N4S7 273 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-210ENST00000471181 CACNA1CQ13936 2221 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 ASCC3Q8N3C0 2202 aaKnown RBP5.52□□□□□ -1.53
BRCA1-210ENST00000471181 FNDC10F2Z333 226 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 HERV-K104P63124 156 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 PRR4Q16378 134 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 HIST2H2BCQ6DN03 193 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 TMEM61Q8N0U2 210 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 B9D2Q9BPU9 175 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 IGKV1-9A0A0C4DH69 117 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 HOXB4P17483 251 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-210ENST00000471181 HIGD2BQ4VC39 106 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 C5orf24Q7Z6I8 188 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 KLF2Q9Y5W3 355 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-210ENST00000471181 ICOSQ9Y6W8 199 aa5.52□□□□□ -1.53
BRCA1-210ENST00000471181 RBBP6Q7Z6E9 1792 aaKnown RBP5.51□□□□□ -1.53
BRCA1-210ENST00000471181 IGLV3-9A0A075B6K5 115 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 IGKV1-27A0A075B6S5 117 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 A0A087WV48 116 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 A0A0J9YWU9 116 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 NDUFB8O95169 186 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 TRBV12-3P01733 135 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 COX8AP10176 69 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 ESM1Q9NQ30 184 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 LRRC37A2A6NM11 1700 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 IGHV4-30-2A0A087WSY4 118 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 G3V318 75 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 MSMBP08118 114 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 Q0VFX4 171 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 DUX4L9Q6RFH8 374 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-210ENST00000471181 LINC00473A8K010 186 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 ASPHD1Q5U4P2 390 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 C18orf32Q8TCD1 76 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 OPRPNQ99935 248 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-210ENST00000471181 TRBV19A0A075B6N1 114 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 LYPD3O95274 346 aa5.51□□□□□ -1.53
BRCA1-210ENST00000471181 MRPS18CQ9Y3D5 142 aaKnown RBP5.51□□□□□ -1.53
BRCA1-210ENST00000471181 SPAG17Q6Q759 2223 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 EPOPA6NHQ4 379 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 NPYP01303 97 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 LYPD6Q86Y78 171 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 RNF138Q8WVD3 245 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 DKK2Q9UBU2 259 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 PRSS47A8MTI9 375 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 SIGLEC8Q9NYZ4 499 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 ZNF492Q9P255 531 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 A0A1B0GW64 132 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 SRRM5B3KS81 715 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 COX7A2LO14548 114 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 CCL25O15444 150 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 GYPEP15421 78 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 LAIR2Q6ISS4 152 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 NCOR1P1Q9H4R4 102 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 ZNRD1Q9P1U0 126 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 EVPLQ92817 2033 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 A0A0G2JNJ9 132 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 CRYGBP07316 175 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 IFI6P09912 130 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 PDE6HQ13956 83 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 LINC01620Q4KN68 170 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 WFDC11Q8NEX6 87 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 GFI1Q99684 422 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 MESP1Q9BRJ9 268 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 SND1-IT1Q9HBX3 110 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 Q9UFV3 132 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 SMIM27A0A1W2PRY6 76 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 GTSF1Q8WW33 167 aa5.5□□□□□ -1.53
BRCA1-210ENST00000471181 MRPL53Q96EL3 112 aaKnown RBP5.5□□□□□ -1.53
BRCA1-210ENST00000471181 IGKV1-12A0A0C4DH73 117 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 BTCP35070 178 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 A0A096LNI7 61 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 TRAV1-1A0A0B4J248 108 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 ZNF493Q6ZR52 646 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 RLFQ13129 1914 aa5.49□□□□□ -1.53
BRCA1-210ENST00000471181 CR1LQ2VPA4 569 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms