RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 TRAV8-2A0A0B4J237 113 aa12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 TMEM189A5PLL7 270 aa12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 HOXA3O43365 443 aaPredicted RBP12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 SH2D1AO60880 128 aa12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 KLF5Q13887 457 aaPredicted RBP12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 NPFFR1Q9GZQ6 430 aa12.97□□□□□ -0.33
SMARCD3-206ENST00000470588 PDZD2O15018 2839 aa12.96□□□□□ -0.33
SMARCD3-206ENST00000470588 CSPG4Q6UVK1 2322 aa12.96□□□□□ -0.33
SMARCD3-206ENST00000470588 A0A1B0GW15 77 aa12.96□□□□□ -0.34
SMARCD3-206ENST00000470588 RPS20P60866 119 aaKnown RBP12.96□□□□□ -0.34
SMARCD3-206ENST00000470588 SRSF2Q01130 221 aaKnown RBP12.96□□□□□ -0.34
SMARCD3-206ENST00000470588 UNQ9165/PRO28630Q6UXU0 137 aa12.96□□□□□ -0.34
SMARCD3-206ENST00000470588 C8orf86Q6ZUL3 223 aa12.96□□□□□ -0.34
SMARCD3-206ENST00000470588 A0A1B0GUT8 65 aa12.95□□□□□ -0.34
SMARCD3-206ENST00000470588 PRAC2D3DTV9 90 aa12.95□□□□□ -0.34
SMARCD3-206ENST00000470588 F2Z2F3 143 aa12.95□□□□□ -0.34
SMARCD3-206ENST00000470588 PSMB8P28062 276 aa12.95□□□□□ -0.34
SMARCD3-206ENST00000470588 IL17RELQ6ZVW7 336 aa12.95□□□□□ -0.34
SMARCD3-206ENST00000470588 ALKBH7Q9BT30 221 aaPredicted RBP12.95□□□□□ -0.34
SMARCD3-206ENST00000470588 PEF1Q9UBV8 284 aaKnown RBP12.95□□□□□ -0.34
SMARCD3-206ENST00000470588 CDPF1Q6NVV7 123 aa12.94□□□□□ -0.34
SMARCD3-206ENST00000470588 TMEM86BQ8N661 226 aa12.94□□□□□ -0.34
SMARCD3-206ENST00000470588 RNF182Q8N6D2 247 aa12.94□□□□□ -0.34
SMARCD3-206ENST00000470588 SIGLECL1Q8N7X8 197 aa12.94□□□□□ -0.34
SMARCD3-206ENST00000470588 SSBP4Q9BWG4 385 aaPredicted RBP12.94□□□□□ -0.34
SMARCD3-206ENST00000470588 K7EMT4 169 aa12.94□□□□□ -0.34
SMARCD3-206ENST00000470588 ERCC8Q13216 396 aa12.94□□□□□ -0.34
SMARCD3-206ENST00000470588 GATD1Q8NB37 220 aa12.94□□□□□ -0.34
SMARCD3-206ENST00000470588 C18orf32Q8TCD1 76 aa12.94□□□□□ -0.34
SMARCD3-206ENST00000470588 BORCS7Q96B45 105 aa12.94□□□□□ -0.34
SMARCD3-206ENST00000470588 FABP5P3A8MUU1 101 aa12.93□□□□□ -0.34
SMARCD3-206ENST00000470588 FAM106AQ4KMX7 169 aa12.93□□□□□ -0.34
SMARCD3-206ENST00000470588 LCNL1Q6ZST4 164 aa12.93□□□□□ -0.34
SMARCD3-206ENST00000470588 Q8TAT8 98 aa12.93□□□□□ -0.34
SMARCD3-206ENST00000470588 C16orf92Q96LL3 132 aa12.93□□□□□ -0.34
SMARCD3-206ENST00000470588 SAMD10Q9BYL1 202 aa12.93□□□□□ -0.34
SMARCD3-206ENST00000470588 PPP1R14DQ9NXH3 145 aa12.93□□□□□ -0.34
SMARCD3-206ENST00000470588 GPX1P07203 203 aa12.92□□□□□ -0.34
SMARCD3-206ENST00000470588 KRTAP1-1Q07627 177 aa12.92□□□□□ -0.34
SMARCD3-206ENST00000470588 TMEM95Q3KNT9 176 aa12.92□□□□□ -0.34
SMARCD3-206ENST00000470588 C9orf47Q6ZRZ4 202 aa12.92□□□□□ -0.34
SMARCD3-206ENST00000470588 AGPAT4-IT1Q9H0P7 198 aa12.92□□□□□ -0.34
SMARCD3-206ENST00000470588 CCDC168Q8NDH2 2452 aa12.92□□□□□ -0.34
SMARCD3-206ENST00000470588 IGHV7-4-1A0A0J9YVY3 117 aa12.92□□□□□ -0.34
SMARCD3-206ENST00000470588 ZNF80P51504 273 aaPredicted RBP12.92□□□□□ -0.34
SMARCD3-206ENST00000470588 GPHB5Q86YW7 130 aa12.92□□□□□ -0.34
SMARCD3-206ENST00000470588 KCNS1Q96KK3 526 aa12.92□□□□□ -0.34
SMARCD3-206ENST00000470588 ARMS2P0C7Q2 107 aa12.91□□□□□ -0.34
SMARCD3-206ENST00000470588 ZNF138P52744 262 aa12.91□□□□□ -0.34
SMARCD3-206ENST00000470588 IQCJQ1A5X6 159 aa12.91□□□□□ -0.34
SMARCD3-206ENST00000470588 TMEM78Q5T7P6 136 aa12.91□□□□□ -0.34
SMARCD3-206ENST00000470588 ZANQ9Y493 2812 aa12.9□□□□□ -0.34
SMARCD3-206ENST00000470588 LOC102724200A0A096LPH7 203 aaPredicted RBP12.9□□□□□ -0.34
SMARCD3-206ENST00000470588 RCHY1Q96PM5 261 aa12.9□□□□□ -0.34
SMARCD3-206ENST00000470588 TMEM160Q9NX00 188 aa12.9□□□□□ -0.34
SMARCD3-206ENST00000470588 SMPXQ9UHP9 88 aa12.9□□□□□ -0.34
SMARCD3-206ENST00000470588 ITPR2Q14571 2701 aa12.9□□□□□ -0.34
SMARCD3-206ENST00000470588 ELANEP08246 267 aa12.89□□□□□ -0.35
SMARCD3-206ENST00000470588 FOXE3Q13461 319 aa12.89□□□□□ -0.35
SMARCD3-206ENST00000470588 LYZL1Q6UWQ5 148 aa12.89□□□□□ -0.35
SMARCD3-206ENST00000470588 RHPN1-AS1Q9BWJ2 59 aa12.89□□□□□ -0.35
SMARCD3-206ENST00000470588 ZNF702PQ9H963 129 aa12.89□□□□□ -0.35
SMARCD3-206ENST00000470588 DAZ1Q9NQZ3 744 aaKnown RBP12.89□□□□□ -0.35
SMARCD3-206ENST00000470588 FLNAP21333 2647 aaKnown RBP12.89□□□□□ -0.35
SMARCD3-206ENST00000470588 TEX15Q9BXT5 2789 aa12.89□□□□□ -0.35
SMARCD3-206ENST00000470588 SCGB1D1O95968 90 aa12.89□□□□□ -0.35
SMARCD3-206ENST00000470588 HIST1H1AQ02539 215 aaPredicted RBP12.89□□□□□ -0.35
SMARCD3-206ENST00000470588 TM4SF20Q53R12 229 aa12.89□□□□□ -0.35
SMARCD3-206ENST00000470588 Q6ZWC4 215 aa12.89□□□□□ -0.35
SMARCD3-206ENST00000470588 LENEPQ9Y5L5 61 aa12.89□□□□□ -0.35
SMARCD3-206ENST00000470588 HECTD1Q9ULT8 2610 aa12.88□□□□□ -0.35
SMARCD3-206ENST00000470588 FASNP49327 2511 aaKnown RBP12.88□□□□□ -0.35
SMARCD3-206ENST00000470588 TMSB15BA0A087X1C1 80 aa12.88□□□□□ -0.35
SMARCD3-206ENST00000470588 SOCS3O14543 225 aa12.88□□□□□ -0.35
SMARCD3-206ENST00000470588 OVOL1O14753 267 aa12.88□□□□□ -0.35
SMARCD3-206ENST00000470588 ZNF324O75467 553 aaPredicted RBP12.88□□□□□ -0.35
SMARCD3-206ENST00000470588 PKIAP61925 76 aa12.88□□□□□ -0.35
SMARCD3-206ENST00000470588 ZNF493Q6ZR52 646 aa12.88□□□□□ -0.35
SMARCD3-206ENST00000470588 LINC00477Q96M19 166 aa12.88□□□□□ -0.35
SMARCD3-206ENST00000470588 UFC1Q9Y3C8 167 aa12.88□□□□□ -0.35
SMARCD3-206ENST00000470588 CELSR1Q9NYQ6 3014 aa12.88□□□□□ -0.35
SMARCD3-206ENST00000470588 ORM1P02763 201 aa12.87□□□□□ -0.35
SMARCD3-206ENST00000470588 AMTP48728 403 aa12.87□□□□□ -0.35
SMARCD3-206ENST00000470588 ZNF738Q8NE65 137 aa12.87□□□□□ -0.35
SMARCD3-206ENST00000470588 C20orf173Q96LM9 149 aa12.87□□□□□ -0.35
SMARCD3-206ENST00000470588 TPPP3Q9BW30 176 aa12.87□□□□□ -0.35
SMARCD3-206ENST00000470588 NRN1Q9NPD7 142 aa12.87□□□□□ -0.35
SMARCD3-206ENST00000470588 NAGKQ9UJ70 344 aa12.87□□□□□ -0.35
SMARCD3-206ENST00000470588 SVEP1Q4LDE5 3571 aa12.87□□□□□ -0.35
SMARCD3-206ENST00000470588 LINC00587B1AMM8 73 aa12.86□□□□□ -0.35
SMARCD3-206ENST00000470588 LINC01559Q495D7 138 aa12.86□□□□□ -0.35
SMARCD3-206ENST00000470588 NIT1Q86X76 327 aa12.86□□□□□ -0.35
SMARCD3-206ENST00000470588 FER1L6-AS1Q8NA97 138 aa12.86□□□□□ -0.35
SMARCD3-206ENST00000470588 IGLC6P0CF74 106 aa12.86□□□□□ -0.35
SMARCD3-206ENST00000470588 CTRLP40313 264 aa12.86□□□□□ -0.35
SMARCD3-206ENST00000470588 DMRTA1Q5VZB9 504 aa12.86□□□□□ -0.35
SMARCD3-206ENST00000470588 C10orf99Q6UWK7 81 aa12.86□□□□□ -0.35
SMARCD3-206ENST00000470588 ZNF575Q86XF7 245 aa12.86□□□□□ -0.35
SMARCD3-206ENST00000470588 Q8N2B8 174 aa12.86□□□□□ -0.35
SMARCD3-206ENST00000470588 MYOZ3Q8TDC0 251 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms