RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 FAM167A-AS1Q96KT0 104 aa3.56□□□□□ -1.84
SF3B1-208ENST00000470268 RNF2Q99496 336 aa3.56□□□□□ -1.84
SF3B1-208ENST00000470268 SHANK2-AS3Q9BTD1 123 aa3.56□□□□□ -1.84
SF3B1-208ENST00000470268 DERL1Q9BUN8 251 aa3.56□□□□□ -1.84
SF3B1-208ENST00000470268 RPS10P5Q9NQ39 176 aa3.56□□□□□ -1.84
SF3B1-208ENST00000470268 KCNIP2Q9NS61 270 aa3.56□□□□□ -1.84
SF3B1-208ENST00000470268 SMPXQ9UHP9 88 aa3.56□□□□□ -1.84
SF3B1-208ENST00000470268 RABAC1Q9UI14 185 aa3.56□□□□□ -1.84
SF3B1-208ENST00000470268 HIGD1AQ9Y241 93 aa3.56□□□□□ -1.84
SF3B1-208ENST00000470268 COX11Q9Y6N1 276 aa3.56□□□□□ -1.84
SF3B1-208ENST00000470268 TRAV1-1A0A0B4J248 108 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 CTXND1A0A1B0GTU2 59 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 SEC14L6B5MCN3 397 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 H0Y8G0 127 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 OVOL1O14753 267 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 SCGB1D1O95968 90 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 PYYP10082 97 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 CDC34P49427 236 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-208ENST00000470268 FABP9Q0Z7S8 132 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 ACOT6Q3I5F7 207 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-208ENST00000470268 DPPA3Q6W0C5 159 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 OR4F17Q8NGA8 305 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 OR1L4Q8NGR5 311 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 RPUSD4Q96CM3 377 aaKnown RBP3.55□□□□□ -1.84
SF3B1-208ENST00000470268 OR4F4Q96R69 305 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 METTL26Q96S19 204 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 RHPN1-AS1Q9BWJ2 59 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 SLC25A2Q9BXI2 301 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 FUT9Q9Y231 359 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 UFC1Q9Y3C8 167 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 YTHDF2Q9Y5A9 579 aaKnown RBP3.55□□□□□ -1.84
SF3B1-208ENST00000470268 SMAD5-AS1Q9Y6J3 95 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 STAB1Q9NY15 2570 aa3.55□□□□□ -1.84
SF3B1-208ENST00000470268 TRAV34A0A0B4J273 112 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 HBE1P02100 147 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 MBP02144 154 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 OR10J4P0C629 311 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 STAG3L2P0CL84 134 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 GP9P14770 177 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 RHOBP62745 196 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 WFDC9Q8NEX5 89 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 ACTR3CQ9C0K3 210 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-208ENST00000470268 TECRQ9NZ01 308 aaKnown RBP3.54□□□□□ -1.84
SF3B1-208ENST00000470268 PEMTQ9UBM1 199 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 RNF24Q9Y225 148 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 WNK1Q9H4A3 2382 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 A0A1W2PPV4 95 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 IZUMO1RA6ND01 250 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 CXorf65A6NEN9 183 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 H3BTX0 84 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 NUDT3O95989 172 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 RAB4AP20338 218 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 TAS2R60P59551 318 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 RAB4BP61018 213 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 MEF2BQ02080 365 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-208ENST00000470268 DEFB114Q30KQ6 69 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 KRTAP21-3Q3LHN1 58 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 KHDC3LQ587J8 217 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 CST9LP1Q5W188 147 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 OR8I2Q8N0Y5 310 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 FAM24BQ8N5W8 94 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 FXYD5Q96DB9 178 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 C14orf144Q96I85 54 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 MRPL32Q9BYC8 188 aaKnown RBP3.54□□□□□ -1.84
SF3B1-208ENST00000470268 SMCO4Q9NRQ5 59 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 VAX2Q9UIW0 290 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 URGCP-MRPS24S4R325 110 aa3.54□□□□□ -1.84
SF3B1-208ENST00000470268 TRBV20OR9-2A0A075B6H5 130 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 IGKV3-7A0A075B6H7 116 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 C11orf94C9JXX5 98 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 M0QZ24 198 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 SLC17A3O00476 420 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 OR7C2O60412 319 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 SAP30O75446 220 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 IGLC2P0DOY2 106 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 IGLL1P15814 213 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 C1orf194Q5T5A4 169 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 TCF24Q7RTU0 167 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 TMEM61Q8N0U2 210 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 C15orf54Q8N8G6 183 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 HIST1H2BAQ96A08 127 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 PARLQ9H300 379 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 ZNF586Q9NXT0 402 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 SIGLEC8Q9NYZ4 499 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 CMYA5Q8N3K9 4069 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 A0A1W2PS18 150 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 SOCS3O14543 225 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 TCAPO15273 167 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 NDUFB4O95168 129 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 IGLV1-51P01701 117 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 CXCL1P09341 107 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 G0S2P27469 103 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 GCHFRP30047 84 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 PSMB3P49720 205 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 SIGLEC15Q6ZMC9 328 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 PQLC2Q6ZP29 291 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 BPIFA4PQ86YQ2 179 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 GBGT1Q8N5D6 347 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 DCANP1Q8TF63 244 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms