RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 OR8A1Q8NGG7 326 aa9.52□□□□□ -0.89
TRAF4-208ENST00000469529 CLUHP3Q96NS8 147 aa9.52□□□□□ -0.89
TRAF4-208ENST00000469529 AGPAT4-IT1Q9H0P7 198 aa9.52□□□□□ -0.89
TRAF4-208ENST00000469529 BIN3Q9NQY0 253 aa9.52□□□□□ -0.89
TRAF4-208ENST00000469529 TRAV34A0A0B4J273 112 aa9.51□□□□□ -0.89
TRAF4-208ENST00000469529 NPIPB6E9PJ23 425 aa9.51□□□□□ -0.89
TRAF4-208ENST00000469529 CENPWQ5EE01 88 aa9.51□□□□□ -0.89
TRAF4-208ENST00000469529 FOXI2Q6ZQN5 318 aa9.51□□□□□ -0.89
TRAF4-208ENST00000469529 ODF3Q96PU9 254 aa9.51□□□□□ -0.89
TRAF4-208ENST00000469529 TMEM242Q9NWH2 141 aa9.51□□□□□ -0.89
TRAF4-208ENST00000469529 ZNF492Q9P255 531 aa9.51□□□□□ -0.89
TRAF4-208ENST00000469529 WNK1Q9H4A3 2382 aa9.5□□□□□ -0.89
TRAF4-208ENST00000469529 IGKV3-7A0A075B6H7 116 aa9.5□□□□□ -0.89
TRAF4-208ENST00000469529 A0A087WWC5 75 aa9.5□□□□□ -0.89
TRAF4-208ENST00000469529 A8MTW9 85 aa9.5□□□□□ -0.89
TRAF4-208ENST00000469529 DUSP14O95147 198 aaKnown RBP9.5□□□□□ -0.89
TRAF4-208ENST00000469529 ZNF138P52744 262 aa9.5□□□□□ -0.89
TRAF4-208ENST00000469529 RHEBQ15382 184 aa9.5□□□□□ -0.89
TRAF4-208ENST00000469529 Q86TA4 180 aa9.5□□□□□ -0.89
TRAF4-208ENST00000469529 WFDC3Q8IUB2 231 aa9.5□□□□□ -0.89
TRAF4-208ENST00000469529 FAM24BQ8N5W8 94 aa9.5□□□□□ -0.89
TRAF4-208ENST00000469529 ZNF738Q8NE65 137 aa9.5□□□□□ -0.89
TRAF4-208ENST00000469529 FAM19A4Q96LR4 140 aa9.5□□□□□ -0.89
TRAF4-208ENST00000469529 PRR25Q96S07 402 aa9.5□□□□□ -0.89
TRAF4-208ENST00000469529 VGLL1Q99990 258 aa9.5□□□□□ -0.89
TRAF4-208ENST00000469529 GPR61Q9BZJ8 451 aa9.5□□□□□ -0.89
TRAF4-208ENST00000469529 TRAV8-1A0A0A6YYK1 113 aa9.49□□□□□ -0.89
TRAF4-208ENST00000469529 A0A0J9YX75 114 aa9.49□□□□□ -0.89
TRAF4-208ENST00000469529 IZUMO1RA6ND01 250 aa9.49□□□□□ -0.89
TRAF4-208ENST00000469529 TMEM78Q5T7P6 136 aa9.49□□□□□ -0.89
TRAF4-208ENST00000469529 FAM231DQ6ZW35 169 aa9.49□□□□□ -0.89
TRAF4-208ENST00000469529 APRG1Q8IVJ8 170 aa9.49□□□□□ -0.89
TRAF4-208ENST00000469529 OR10J6PQ8NGY7 276 aa9.49□□□□□ -0.89
TRAF4-208ENST00000469529 ISOC2Q96AB3 205 aa9.49□□□□□ -0.89
TRAF4-208ENST00000469529 SAV1Q9H4B6 383 aaPredicted RBP9.49□□□□□ -0.89
TRAF4-208ENST00000469529 IGKV2-40A0A087WW87 121 aaPredicted RBP9.48□□□□□ -0.89
TRAF4-208ENST00000469529 C7orf77A4D0Y5 90 aa9.48□□□□□ -0.89
TRAF4-208ENST00000469529 IGKV2D-40P01614 121 aaPredicted RBP9.48□□□□□ -0.89
TRAF4-208ENST00000469529 ZNF688P0C7X2 276 aa9.48□□□□□ -0.89
TRAF4-208ENST00000469529 CRISP2P16562 243 aa9.48□□□□□ -0.89
TRAF4-208ENST00000469529 CD33P20138 364 aa9.48□□□□□ -0.89
TRAF4-208ENST00000469529 TFPI2P48307 235 aa9.48□□□□□ -0.89
TRAF4-208ENST00000469529 PSMG4Q5JS54 123 aa9.48□□□□□ -0.89
TRAF4-208ENST00000469529 EBLN2Q6P2I7 272 aa9.48□□□□□ -0.89
TRAF4-208ENST00000469529 PRNTQ86SH4 94 aa9.48□□□□□ -0.89
TRAF4-208ENST00000469529 ANAPC16Q96DE5 110 aa9.48□□□□□ -0.89
TRAF4-208ENST00000469529 CTDSP1Q9GZU7 261 aa9.48□□□□□ -0.89
TRAF4-208ENST00000469529 OSTCQ9NRP0 149 aa9.48□□□□□ -0.89
TRAF4-208ENST00000469529 MGAM2Q2M2H8 2515 aa9.47□□□□□ -0.89
TRAF4-208ENST00000469529 K7EN84 100 aa9.47□□□□□ -0.89
TRAF4-208ENST00000469529 PPP1R2P9O14990 202 aa9.47□□□□□ -0.89
TRAF4-208ENST00000469529 MT-ND4LP03901 98 aa9.47□□□□□ -0.89
TRAF4-208ENST00000469529 CT45A10P0DMU9 189 aa9.47□□□□□ -0.89
TRAF4-208ENST00000469529 NDFIP1Q9BT67 221 aa9.47□□□□□ -0.89
TRAF4-208ENST00000469529 TUBA4BQ9H853 241 aa9.47□□□□□ -0.89
TRAF4-208ENST00000469529 MAP6D1Q9H9H5 199 aa9.47□□□□□ -0.89
TRAF4-208ENST00000469529 C19orf73Q9NVV2 129 aa9.47□□□□□ -0.89
TRAF4-208ENST00000469529 RPH3ALQ9UNE2 315 aa9.47□□□□□ -0.89
TRAF4-208ENST00000469529 CXorf65A6NEN9 183 aa9.46□□□□□ -0.9
TRAF4-208ENST00000469529 PGPEP1LA6NFU8 196 aa9.46□□□□□ -0.9
TRAF4-208ENST00000469529 M0R036 132 aa9.46□□□□□ -0.9
TRAF4-208ENST00000469529 HLA-DRB4P13762 266 aa9.46□□□□□ -0.9
TRAF4-208ENST00000469529 DEFB131AP59861 70 aa9.46□□□□□ -0.9
TRAF4-208ENST00000469529 ERCC8Q13216 396 aa9.46□□□□□ -0.9
TRAF4-208ENST00000469529 ADIRFQ15847 76 aa9.46□□□□□ -0.9
TRAF4-208ENST00000469529 ODF3L2Q3SX64 289 aa9.46□□□□□ -0.9
TRAF4-208ENST00000469529 SGK494Q96LW2 274 aa9.46□□□□□ -0.9
TRAF4-208ENST00000469529 ZMAT5Q9UDW3 170 aaKnown RBP9.46□□□□□ -0.9
TRAF4-208ENST00000469529 SELENOKQ9Y6D0 94 aa9.46□□□□□ -0.9
TRAF4-208ENST00000469529 HLA-DRB4X5D2U9 266 aa9.46□□□□□ -0.9
TRAF4-208ENST00000469529 C19orf71A6NCJ1 209 aa9.45□□□□□ -0.9
TRAF4-208ENST00000469529 OR11H12B2RN74 326 aa9.45□□□□□ -0.9
TRAF4-208ENST00000469529 H3BMM0 161 aa9.45□□□□□ -0.9
TRAF4-208ENST00000469529 SMUG1Q53HV7 270 aa9.45□□□□□ -0.9
TRAF4-208ENST00000469529 ATRAIDQ6UW56 229 aa9.45□□□□□ -0.9
TRAF4-208ENST00000469529 SFRP2Q96HF1 295 aa9.45□□□□□ -0.9
TRAF4-208ENST00000469529 IMMP2LQ96T52 175 aa9.45□□□□□ -0.9
TRAF4-208ENST00000469529 ASCL2Q99929 193 aa9.45□□□□□ -0.9
TRAF4-208ENST00000469529 FABP5P3A8MUU1 101 aa9.44□□□□□ -0.9
TRAF4-208ENST00000469529 KLLNB2CW77 178 aa9.44□□□□□ -0.9
TRAF4-208ENST00000469529 F6UB75 175 aa9.44□□□□□ -0.9
TRAF4-208ENST00000469529 CRIP1P50238 77 aa9.44□□□□□ -0.9
TRAF4-208ENST00000469529 HIST1H1AQ02539 215 aaPredicted RBP9.44□□□□□ -0.9
TRAF4-208ENST00000469529 RNF212Q495C1 297 aa9.44□□□□□ -0.9
TRAF4-208ENST00000469529 CT83Q5H943 113 aa9.44□□□□□ -0.9
TRAF4-208ENST00000469529 AMTNQ6UX39 209 aa9.44□□□□□ -0.9
TRAF4-208ENST00000469529 ZFAND2AQ8N6M9 145 aa9.44□□□□□ -0.9
TRAF4-208ENST00000469529 C15orf54Q8N8G6 183 aa9.44□□□□□ -0.9
TRAF4-208ENST00000469529 ZC2HC1AQ96GY0 325 aa9.44□□□□□ -0.9
TRAF4-208ENST00000469529 PKD1L1Q8TDX9 2849 aa9.44□□□□□ -0.9
TRAF4-208ENST00000469529 TSPOP30536 169 aa9.43□□□□□ -0.9
TRAF4-208ENST00000469529 ERVFC1-1P60608 527 aa9.43□□□□□ -0.9
TRAF4-208ENST00000469529 OR5I1Q13606 314 aa9.43□□□□□ -0.9
TRAF4-208ENST00000469529 GDF5OSQ5U4N7 250 aa9.43□□□□□ -0.9
TRAF4-208ENST00000469529 NUDT10Q8NFP7 164 aa9.43□□□□□ -0.9
TRAF4-208ENST00000469529 OR4B1Q8NGF8 309 aa9.43□□□□□ -0.9
TRAF4-208ENST00000469529 OR10G8Q8NGN5 311 aa9.43□□□□□ -0.9
TRAF4-208ENST00000469529 NUDT11Q96G61 164 aa9.43□□□□□ -0.9
TRAF4-208ENST00000469529 RPS10P5Q9NQ39 176 aa9.43□□□□□ -0.9
TRAF4-208ENST00000469529 VWFP04275 2813 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms