RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 SAV1Q9H4B6 383 aaPredicted RBP6.04□□□□□ -1.44
HDAC6-216ENST00000468949 MED9Q9NWA0 146 aa6.04□□□□□ -1.44
HDAC6-216ENST00000468949 HLA-DRB4X5D2U9 266 aa6.04□□□□□ -1.44
HDAC6-216ENST00000468949 PRKDCP78527 4128 aaKnown RBP6.03□□□□□ -1.44
HDAC6-216ENST00000468949 A0A0J9YX75 114 aa6.03□□□□□ -1.44
HDAC6-216ENST00000468949 RAB19A4D1S5 217 aa6.03□□□□□ -1.44
HDAC6-216ENST00000468949 F6UB75 175 aa6.03□□□□□ -1.44
HDAC6-216ENST00000468949 S100A9P06702 114 aaKnown RBP6.03□□□□□ -1.44
HDAC6-216ENST00000468949 ZNF705DP0CH99 300 aaPredicted RBP6.03□□□□□ -1.44
HDAC6-216ENST00000468949 ZNF705BP0CI00 300 aaPredicted RBP6.03□□□□□ -1.44
HDAC6-216ENST00000468949 PRB4P10163 310 aaPredicted RBP6.03□□□□□ -1.44
HDAC6-216ENST00000468949 RPL35AP18077 110 aaKnown RBP6.03□□□□□ -1.44
HDAC6-216ENST00000468949 TSPOP30536 169 aa6.03□□□□□ -1.44
HDAC6-216ENST00000468949 LEPP41159 167 aa6.03□□□□□ -1.44
HDAC6-216ENST00000468949 APOC4P55056 127 aa6.03□□□□□ -1.44
HDAC6-216ENST00000468949 ZNF674Q2M3X9 581 aa6.03□□□□□ -1.44
HDAC6-216ENST00000468949 COMMD7Q86VX2 200 aa6.03□□□□□ -1.44
HDAC6-216ENST00000468949 TMEM75Q8N9X5 138 aa6.03□□□□□ -1.44
HDAC6-216ENST00000468949 LINC00477Q96M19 166 aa6.03□□□□□ -1.44
HDAC6-216ENST00000468949 RARRES2Q99969 163 aa6.03□□□□□ -1.44
HDAC6-216ENST00000468949 AURKAIP1Q9NWT8 199 aaPredicted RBP6.03□□□□□ -1.44
HDAC6-216ENST00000468949 LOC102724200A0A096LPH7 203 aaPredicted RBP6.02□□□□□ -1.45
HDAC6-216ENST00000468949 PRAC2D3DTV9 90 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 NPIPB6E9PJ23 425 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 TMEM250H0YL14 139 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 H3BMM0 161 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 AMBPP02760 352 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 PRB2P02812 416 aaPredicted RBP6.02□□□□□ -1.45
HDAC6-216ENST00000468949 CT45A10P0DMU9 189 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 IGHV4-30-4P0DP06 118 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 ZNF138P52744 262 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 DEFB1P60022 68 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 FLI1Q01543 452 aaPredicted RBP6.02□□□□□ -1.45
HDAC6-216ENST00000468949 ERCC8Q13216 396 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 ZNF124Q15973 351 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 MORN3Q6PF18 240 aaPredicted RBP6.02□□□□□ -1.45
HDAC6-216ENST00000468949 PRNTQ86SH4 94 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 Q8TAT8 98 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 MRAPQ8TCY5 172 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 C1QTNF4Q9BXJ3 329 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 SMDT1Q9H4I9 107 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 NOTCH3Q9UM47 2321 aa6.02□□□□□ -1.45
HDAC6-216ENST00000468949 TRAV8-1A0A0A6YYK1 113 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 TRAV34A0A0B4J273 112 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 J3KRW8 73 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 CA1P00915 261 aaPredicted RBP6.01□□□□□ -1.45
HDAC6-216ENST00000468949 GNG4P50150 75 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 DEFB121Q5J5C9 76 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 SAPCD1Q5SSQ6 148 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 GDF5OSQ5U4N7 250 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 UQCC3Q6UW78 93 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 C9orf47Q6ZRZ4 202 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 Q86TA4 180 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 TRPT1Q86TN4 253 aaKnown RBP6.01□□□□□ -1.45
HDAC6-216ENST00000468949 CCDC28AQ8IWP9 274 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 C11orf52Q96A22 123 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 SGK494Q96LW2 274 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 VGLL1Q99990 258 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 SLC35B3Q9H1N7 401 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 PSG8Q9UQ74 426 aa6.01□□□□□ -1.45
HDAC6-216ENST00000468949 NDUFS6O75380 124 aaKnown RBP6□□□□□ -1.45
HDAC6-216ENST00000468949 INSP01308 110 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 GPX1P07203 203 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 MGST1P10620 155 aaKnown RBP6□□□□□ -1.45
HDAC6-216ENST00000468949 RPL35P42766 123 aaKnown RBP6□□□□□ -1.45
HDAC6-216ENST00000468949 CDKN1BP46527 198 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 FXYD7P58549 80 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 TAS2R60P59551 318 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 NDUFA5Q16718 116 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 TMEM183BQ1AE95 376 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 SPINK13Q1W4C9 94 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 SOHLH1Q5JUK2 328 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 C2CD4CQ8TF44 421 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 ANAPC16Q96DE5 110 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 ODF3Q96PU9 254 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 SMIM7Q9BQ49 75 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 TMEM208Q9BTX3 173 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 AGPAT4-IT1Q9H0P7 198 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 PARLQ9H300 379 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 C19orf73Q9NVV2 129 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 ZNF492Q9P255 531 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 LENEPQ9Y5L5 61 aa6□□□□□ -1.45
HDAC6-216ENST00000468949 DNAH3Q8TD57 4116 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 LINC00862A6NCI5 91 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 ZNF727A8MUV8 499 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 M0R2Z0 102 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 SRP19P09132 144 aaKnown RBP5.99□□□□□ -1.45
HDAC6-216ENST00000468949 SFTA3P0C7M3 94 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 FAM74A3Q4VXF1 159 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 SMUG1Q53HV7 270 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 CENPWQ5EE01 88 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 CDPF1Q6NVV7 123 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 BAGE2Q86Y30 109 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 SLC7A5P1Q8MH63 180 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 Q8N1Y9 231 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 LINC00479Q96M42 142 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 CLUHP3Q96NS8 147 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 NIPSNAP3BQ9BS92 247 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 CSTL1Q9H114 145 aa5.99□□□□□ -1.45
HDAC6-216ENST00000468949 BIN3Q9NQY0 253 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms