RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 C20orf144Q9BQM9 153 aa12.39□□□□□ -0.43
CLDN11-202ENST00000468358 AGPAT4-IT1Q9H0P7 198 aa12.39□□□□□ -0.43
CLDN11-202ENST00000468358 SH3BGRL3Q9H299 93 aa12.39□□□□□ -0.43
CLDN11-202ENST00000468358 PLA2G2EQ9NZK7 142 aa12.39□□□□□ -0.43
CLDN11-202ENST00000468358 MBP02144 154 aa12.38□□□□□ -0.43
CLDN11-202ENST00000468358 SERF2P84101 59 aa12.38□□□□□ -0.43
CLDN11-202ENST00000468358 LYPD1Q8N2G4 141 aa12.38□□□□□ -0.43
CLDN11-202ENST00000468358 GNPNAT1Q96EK6 184 aaPredicted RBP12.38□□□□□ -0.43
CLDN11-202ENST00000468358 RPH3ALQ9UNE2 315 aa12.38□□□□□ -0.43
CLDN11-202ENST00000468358 PLECQ15149 4684 aaKnown RBP12.38□□□□□ -0.43
CLDN11-202ENST00000468358 SACSQ9NZJ4 4579 aa12.37□□□□□ -0.43
CLDN11-202ENST00000468358 G3V3Q6 166 aa12.37□□□□□ -0.43
CLDN11-202ENST00000468358 TCTAP57738 103 aa12.37□□□□□ -0.43
CLDN11-202ENST00000468358 FAM74A1Q5RGS3 127 aa12.37□□□□□ -0.43
CLDN11-202ENST00000468358 C9orf47Q6ZRZ4 202 aa12.37□□□□□ -0.43
CLDN11-202ENST00000468358 CCDC28AQ8IWP9 274 aa12.37□□□□□ -0.43
CLDN11-202ENST00000468358 CMTM2Q8TAZ6 248 aa12.37□□□□□ -0.43
CLDN11-202ENST00000468358 C16orf74Q96GX8 76 aa12.37□□□□□ -0.43
CLDN11-202ENST00000468358 VGLL1Q99990 258 aa12.37□□□□□ -0.43
CLDN11-202ENST00000468358 ALMS1Q8TCU4 4167 aa12.37□□□□□ -0.43
CLDN11-202ENST00000468358 IGHV4-4A0A075B6R2 117 aa12.36□□□□□ -0.43
CLDN11-202ENST00000468358 LYRM9A8MSI8 78 aa12.36□□□□□ -0.43
CLDN11-202ENST00000468358 SLC25A5P05141 298 aaKnown RBP12.36□□□□□ -0.43
CLDN11-202ENST00000468358 GPX1P07203 203 aa12.36□□□□□ -0.43
CLDN11-202ENST00000468358 ARL14EPLP0DKL9 152 aa12.36□□□□□ -0.43
CLDN11-202ENST00000468358 DEFB130BP0DP73 79 aa12.36□□□□□ -0.43
CLDN11-202ENST00000468358 DEFB130AP0DP74 79 aa12.36□□□□□ -0.43
CLDN11-202ENST00000468358 RAB24Q969Q5 203 aa12.36□□□□□ -0.43
CLDN11-202ENST00000468358 C7orf71A4D174 169 aa12.35□□□□□ -0.43
CLDN11-202ENST00000468358 PGPA6NDG6 321 aa12.35□□□□□ -0.43
CLDN11-202ENST00000468358 RNASE4P34096 147 aaKnown RBP12.35□□□□□ -0.43
CLDN11-202ENST00000468358 ZNF138P52744 262 aa12.35□□□□□ -0.43
CLDN11-202ENST00000468358 BTN1A1Q13410 526 aa12.35□□□□□ -0.43
CLDN11-202ENST00000468358 ZNF493Q6ZR52 646 aa12.35□□□□□ -0.43
CLDN11-202ENST00000468358 IQCF2Q8IXL9 164 aa12.35□□□□□ -0.43
CLDN11-202ENST00000468358 Q8TAT8 98 aa12.35□□□□□ -0.43
CLDN11-202ENST00000468358 RXFP4Q8TDU9 374 aa12.35□□□□□ -0.43
CLDN11-202ENST00000468358 TMEM263Q8WUH6 116 aaKnown RBP12.35□□□□□ -0.43
CLDN11-202ENST00000468358 ACTR3CQ9C0K3 210 aaPredicted RBP12.35□□□□□ -0.43
CLDN11-202ENST00000468358 OTORQ9NRC9 128 aa12.35□□□□□ -0.43
CLDN11-202ENST00000468358 TAAR5O14804 337 aa12.34□□□□□ -0.43
CLDN11-202ENST00000468358 STAG3L2P0CL84 134 aa12.34□□□□□ -0.43
CLDN11-202ENST00000468358 STAG3L3P0CL85 134 aa12.34□□□□□ -0.43
CLDN11-202ENST00000468358 ZNF492Q9P255 531 aa12.34□□□□□ -0.43
CLDN11-202ENST00000468358 APLNQ9ULZ1 77 aa12.34□□□□□ -0.43
CLDN11-202ENST00000468358 TIMM8BQ9Y5J9 83 aaPredicted RBP12.34□□□□□ -0.43
CLDN11-202ENST00000468358 DIRC3C9JPN6 131 aa12.33□□□□□ -0.44
CLDN11-202ENST00000468358 CD300CQ08708 224 aa12.33□□□□□ -0.44
CLDN11-202ENST00000468358 PYGO2Q9BRQ0 406 aa12.33□□□□□ -0.44
CLDN11-202ENST00000468358 NDUFAF3Q9BU61 184 aa12.33□□□□□ -0.44
CLDN11-202ENST00000468358 NOP10Q9NPE3 64 aaKnown RBP12.33□□□□□ -0.44
CLDN11-202ENST00000468358 RYR2Q92736 4967 aa12.32□□□□□ -0.44
CLDN11-202ENST00000468358 PLAC8L1A1L4L8 177 aa12.32□□□□□ -0.44
CLDN11-202ENST00000468358 RBAKDNA6NC62 111 aa12.32□□□□□ -0.44
CLDN11-202ENST00000468358 SNURFLB1AK76 121 aa12.32□□□□□ -0.44
CLDN11-202ENST00000468358 KLLNB2CW77 178 aa12.32□□□□□ -0.44
CLDN11-202ENST00000468358 CRISP2P16562 243 aa12.32□□□□□ -0.44
CLDN11-202ENST00000468358 GCHFRP30047 84 aa12.32□□□□□ -0.44
CLDN11-202ENST00000468358 AKR1C8PQ5T2L2 129 aa12.32□□□□□ -0.44
CLDN11-202ENST00000468358 LGALS9CQ6DKI2 356 aa12.32□□□□□ -0.44
CLDN11-202ENST00000468358 RNASE8Q8TDE3 154 aaKnown RBP12.32□□□□□ -0.44
CLDN11-202ENST00000468358 FAM19A4Q96LR4 140 aa12.32□□□□□ -0.44
CLDN11-202ENST00000468358 CXorf1O96002 111 aa12.31□□□□□ -0.44
CLDN11-202ENST00000468358 GOLT1AQ6ZVE7 132 aa12.31□□□□□ -0.44
CLDN11-202ENST00000468358 ARPC5LQ9BPX5 153 aa12.31□□□□□ -0.44
CLDN11-202ENST00000468358 CBY3A6NI87 242 aa12.3□□□□□ -0.44
CLDN11-202ENST00000468358 RGS13O14921 159 aa12.3□□□□□ -0.44
CLDN11-202ENST00000468358 NMBP08949 121 aa12.3□□□□□ -0.44
CLDN11-202ENST00000468358 PRR9Q5T870 116 aa12.3□□□□□ -0.44
CLDN11-202ENST00000468358 KCNRGQ8N5I3 272 aa12.3□□□□□ -0.44
CLDN11-202ENST00000468358 ZFAND2AQ8N6M9 145 aa12.3□□□□□ -0.44
CLDN11-202ENST00000468358 TMEM167BQ9NRX6 74 aa12.3□□□□□ -0.44
CLDN11-202ENST00000468358 CTXND1A0A1B0GTU2 59 aa12.29□□□□□ -0.44
CLDN11-202ENST00000468358 GNG5P63218 68 aa12.29□□□□□ -0.44
CLDN11-202ENST00000468358 ZNF345Q14585 488 aa12.29□□□□□ -0.44
CLDN11-202ENST00000468358 SSX7Q7RTT5 188 aa12.29□□□□□ -0.44
CLDN11-202ENST00000468358 EIF4E3Q8N5X7 224 aaKnown RBP12.29□□□□□ -0.44
CLDN11-202ENST00000468358 OR11H4Q8NGC9 324 aa12.29□□□□□ -0.44
CLDN11-202ENST00000468358 CYTL1Q9NRR1 136 aa12.29□□□□□ -0.44
CLDN11-202ENST00000468358 DNAH1Q9P2D7 4330 aa12.28□□□□□ -0.44
CLDN11-202ENST00000468358 KANTRA0A1W2PQU2 76 aa12.28□□□□□ -0.44
CLDN11-202ENST00000468358 HMSDA8MTL9 139 aa12.28□□□□□ -0.44
CLDN11-202ENST00000468358 F5H768 121 aa12.28□□□□□ -0.44
CLDN11-202ENST00000468358 ZNF324O75467 553 aaPredicted RBP12.28□□□□□ -0.44
CLDN11-202ENST00000468358 ATP5G1P05496 136 aa12.28□□□□□ -0.44
CLDN11-202ENST00000468358 ATP5G3P48201 142 aa12.28□□□□□ -0.44
CLDN11-202ENST00000468358 ZNF680Q8NEM1 530 aa12.28□□□□□ -0.44
CLDN11-202ENST00000468358 ST6GAL2Q96JF0 529 aa12.28□□□□□ -0.44
CLDN11-202ENST00000468358 ZNF471Q9BX82 626 aaPredicted RBP12.28□□□□□ -0.44
CLDN11-202ENST00000468358 A0A0D9SG52 128 aa12.27□□□□□ -0.45
CLDN11-202ENST00000468358 TRBV7-9A0A0J9YWB2 115 aa12.27□□□□□ -0.45
CLDN11-202ENST00000468358 PFDN1O60925 122 aa12.27□□□□□ -0.45
CLDN11-202ENST00000468358 TMEM88Q6PEY1 159 aa12.27□□□□□ -0.45
CLDN11-202ENST00000468358 C5orf17Q8NAS9 161 aa12.27□□□□□ -0.45
CLDN11-202ENST00000468358 FAM210BQ96KR6 192 aa12.27□□□□□ -0.45
CLDN11-202ENST00000468358 LENEPQ9Y5L5 61 aa12.27□□□□□ -0.45
CLDN11-202ENST00000468358 IGHV1OR15-1A0A075B7D0 117 aa12.26□□□□□ -0.45
CLDN11-202ENST00000468358 TRAV8-1A0A0A6YYK1 113 aa12.26□□□□□ -0.45
CLDN11-202ENST00000468358 GAGE12BA1L429 117 aa12.26□□□□□ -0.45
CLDN11-202ENST00000468358 K7EQM0 130 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms