RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 TXNDC17Q9BRA2 123 aa9.77□□□□□ -0.85
RPP40-204ENST00000468105 SLC50A1Q9BRV3 221 aa9.77□□□□□ -0.85
RPP40-204ENST00000468105 NKX6-2Q9C056 277 aaPredicted RBP9.77□□□□□ -0.85
RPP40-204ENST00000468105 NRN1Q9NPD7 142 aa9.77□□□□□ -0.85
RPP40-204ENST00000468105 CLEC5AQ9NY25 188 aa9.77□□□□□ -0.85
RPP40-204ENST00000468105 CELA1Q9UNI1 258 aa9.77□□□□□ -0.85
RPP40-204ENST00000468105 LINC00862A6NCI5 91 aa9.76□□□□□ -0.85
RPP40-204ENST00000468105 NDUFS6O75380 124 aaKnown RBP9.76□□□□□ -0.85
RPP40-204ENST00000468105 NDUFB4O95168 129 aa9.76□□□□□ -0.85
RPP40-204ENST00000468105 CA1P00915 261 aaPredicted RBP9.76□□□□□ -0.85
RPP40-204ENST00000468105 PAFAH1B2P68402 229 aa9.76□□□□□ -0.85
RPP40-204ENST00000468105 PSG9Q00887 426 aa9.76□□□□□ -0.85
RPP40-204ENST00000468105 ZNF331Q9NQX6 463 aaPredicted RBP9.76□□□□□ -0.85
RPP40-204ENST00000468105 GNG13Q9P2W3 67 aa9.76□□□□□ -0.85
RPP40-204ENST00000468105 X6R8D5 127 aa9.76□□□□□ -0.85
RPP40-204ENST00000468105 FAM74A7A6NL05 159 aa9.75□□□□□ -0.85
RPP40-204ENST00000468105 SOCS3O14543 225 aa9.75□□□□□ -0.85
RPP40-204ENST00000468105 BCL2P10415 239 aa9.75□□□□□ -0.85
RPP40-204ENST00000468105 RPL11P62913 178 aaKnown RBP9.75□□□□□ -0.85
RPP40-204ENST00000468105 DCANP1Q8TF63 244 aa9.75□□□□□ -0.85
RPP40-204ENST00000468105 BLNKQ8WV28 456 aa9.75□□□□□ -0.85
RPP40-204ENST00000468105 FAM210AQ96ND0 272 aa9.75□□□□□ -0.85
RPP40-204ENST00000468105 MS4A6AQ9H2W1 248 aa9.75□□□□□ -0.85
RPP40-204ENST00000468105 PRELID1Q9Y255 219 aa9.75□□□□□ -0.85
RPP40-204ENST00000468105 LOC102723971A0A1B0GUV8 181 aa9.74□□□□□ -0.85
RPP40-204ENST00000468105 RAB19A4D1S5 217 aa9.74□□□□□ -0.85
RPP40-204ENST00000468105 K7EQG2 157 aa9.74□□□□□ -0.85
RPP40-204ENST00000468105 ISLRO14498 428 aa9.74□□□□□ -0.85
RPP40-204ENST00000468105 PAGE4O60829 102 aa9.74□□□□□ -0.85
RPP40-204ENST00000468105 ZNF506Q5JVG8 444 aa9.74□□□□□ -0.85
RPP40-204ENST00000468105 ARL6IP6Q8N6S5 226 aa9.74□□□□□ -0.85
RPP40-204ENST00000468105 TCEAL7Q9BRU2 100 aa9.74□□□□□ -0.85
RPP40-204ENST00000468105 Q9H3A6 140 aa9.74□□□□□ -0.85
RPP40-204ENST00000468105 SMDT1Q9H4I9 107 aa9.74□□□□□ -0.85
RPP40-204ENST00000468105 AAMDCQ9H7C9 122 aa9.74□□□□□ -0.85
RPP40-204ENST00000468105 OTORQ9NRC9 128 aa9.74□□□□□ -0.85
RPP40-204ENST00000468105 VAX2Q9UIW0 290 aa9.74□□□□□ -0.85
RPP40-204ENST00000468105 RBFOX3A6NFN3 312 aa9.73□□□□□ -0.85
RPP40-204ENST00000468105 C11orf94C9JXX5 98 aa9.73□□□□□ -0.85
RPP40-204ENST00000468105 H3BTX0 84 aa9.73□□□□□ -0.85
RPP40-204ENST00000468105 DNASE2O00115 360 aaPredicted RBP9.73□□□□□ -0.85
RPP40-204ENST00000468105 SLC17A3O00476 420 aa9.73□□□□□ -0.85
RPP40-204ENST00000468105 SNRPCP09234 159 aaKnown RBP9.73□□□□□ -0.85
RPP40-204ENST00000468105 ID1P41134 155 aa9.73□□□□□ -0.85
RPP40-204ENST00000468105 UBE2G2P60604 165 aa9.73□□□□□ -0.85
RPP40-204ENST00000468105 RANP62826 216 aaKnown RBP9.73□□□□□ -0.85
RPP40-204ENST00000468105 C12orf74Q32Q52 190 aa9.73□□□□□ -0.85
RPP40-204ENST00000468105 Q6ZR54 194 aa9.73□□□□□ -0.85
RPP40-204ENST00000468105 CCDC28AQ8IWP9 274 aa9.73□□□□□ -0.85
RPP40-204ENST00000468105 POM121L12Q8N7R1 296 aa9.73□□□□□ -0.85
RPP40-204ENST00000468105 MRPL53Q96EL3 112 aaKnown RBP9.73□□□□□ -0.85
RPP40-204ENST00000468105 C16orf92Q96LL3 132 aa9.73□□□□□ -0.85
RPP40-204ENST00000468105 YTHDF2Q9Y5A9 579 aaKnown RBP9.73□□□□□ -0.85
RPP40-204ENST00000468105 IGLV2-18A0A075B6J9 118 aa9.72□□□□□ -0.85
RPP40-204ENST00000468105 TRAV8-2A0A0B4J237 113 aa9.72□□□□□ -0.85
RPP40-204ENST00000468105 GGTLC3B5MD39 225 aa9.72□□□□□ -0.85
RPP40-204ENST00000468105 MEF2BQ02080 365 aaPredicted RBP9.72□□□□□ -0.85
RPP40-204ENST00000468105 CST9LP1Q5W188 147 aa9.72□□□□□ -0.85
RPP40-204ENST00000468105 FAT1Q14517 4588 aa9.72□□□□□ -0.85
RPP40-204ENST00000468105 TRAV10A0A0B4J240 114 aa9.71□□□□□ -0.86
RPP40-204ENST00000468105 PGPA6NDG6 321 aa9.71□□□□□ -0.86
RPP40-204ENST00000468105 CMC4P56277 68 aaPredicted RBP9.71□□□□□ -0.86
RPP40-204ENST00000468105 DEFB131AP59861 70 aa9.71□□□□□ -0.86
RPP40-204ENST00000468105 SUMO1P63165 101 aaKnown RBP9.71□□□□□ -0.86
RPP40-204ENST00000468105 ICAM4Q14773 271 aa9.71□□□□□ -0.86
RPP40-204ENST00000468105 PEA15Q15121 130 aa9.71□□□□□ -0.86
RPP40-204ENST00000468105 PSG3Q16557 428 aa9.71□□□□□ -0.86
RPP40-204ENST00000468105 NDUFA5Q16718 116 aa9.71□□□□□ -0.86
RPP40-204ENST00000468105 TOR2AQ5JU69 321 aa9.71□□□□□ -0.86
RPP40-204ENST00000468105 EXOC3-AS1Q8N2X6 119 aa9.71□□□□□ -0.86
RPP40-204ENST00000468105 EIF4E3Q8N5X7 224 aaKnown RBP9.71□□□□□ -0.86
RPP40-204ENST00000468105 C5orf17Q8NAS9 161 aa9.71□□□□□ -0.86
RPP40-204ENST00000468105 CSNK1G2-AS1Q8NCQ2 148 aa9.71□□□□□ -0.86
RPP40-204ENST00000468105 RXFP4Q8TDU9 374 aa9.71□□□□□ -0.86
RPP40-204ENST00000468105 EIF5A2Q9GZV4 153 aaKnown RBP9.71□□□□□ -0.86
RPP40-204ENST00000468105 NACAE9PAV3 2078 aa9.7□□□□□ -0.86
RPP40-204ENST00000468105 F6UZH7 168 aa9.7□□□□□ -0.86
RPP40-204ENST00000468105 PDE6DO43924 150 aa9.7□□□□□ -0.86
RPP40-204ENST00000468105 AMBPP02760 352 aa9.7□□□□□ -0.86
RPP40-204ENST00000468105 ATP5G3P48201 142 aa9.7□□□□□ -0.86
RPP40-204ENST00000468105 SNRPD3P62318 126 aaKnown RBP9.7□□□□□ -0.86
RPP40-204ENST00000468105 LGALS9BQ3B8N2 356 aa9.7□□□□□ -0.86
RPP40-204ENST00000468105 UQCC3Q6UW78 93 aa9.7□□□□□ -0.86
RPP40-204ENST00000468105 CMTM2Q8TAZ6 248 aa9.7□□□□□ -0.86
RPP40-204ENST00000468105 SERTM2A0A1B0GWG4 89 aa9.69□□□□□ -0.86
RPP40-204ENST00000468105 TMEM250H0YL14 139 aa9.69□□□□□ -0.86
RPP40-204ENST00000468105 SLC25A5P05141 298 aaKnown RBP9.69□□□□□ -0.86
RPP40-204ENST00000468105 CSN1S1P47710 185 aa9.69□□□□□ -0.86
RPP40-204ENST00000468105 TRPT1Q86TN4 253 aaKnown RBP9.69□□□□□ -0.86
RPP40-204ENST00000468105 COMMD7Q86VX2 200 aa9.69□□□□□ -0.86
RPP40-204ENST00000468105 HIST1H2BAQ96A08 127 aa9.69□□□□□ -0.86
RPP40-204ENST00000468105 C11orf52Q96A22 123 aa9.69□□□□□ -0.86
RPP40-204ENST00000468105 EPDR1Q9UM22 224 aa9.69□□□□□ -0.86
RPP40-204ENST00000468105 DEFB131BA0A096LNP1 70 aa9.68□□□□□ -0.86
RPP40-204ENST00000468105 KNCNA6PVL3 124 aa9.68□□□□□ -0.86
RPP40-204ENST00000468105 M0R3E3 92 aa9.68□□□□□ -0.86
RPP40-204ENST00000468105 RPUSD4Q96CM3 377 aaKnown RBP9.68□□□□□ -0.86
RPP40-204ENST00000468105 C20orf173Q96LM9 149 aa9.68□□□□□ -0.86
RPP40-204ENST00000468105 ATG101Q9BSB4 218 aa9.68□□□□□ -0.86
RPP40-204ENST00000468105 RBAKDNA6NC62 111 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms