RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 HBG2P69892 147 aa14.55□□□□□ -0.08
COL9A3-207ENST00000467819 TMEM252Q8N6L7 170 aa14.55□□□□□ -0.08
COL9A3-207ENST00000467819 ZNF680Q8NEM1 530 aa14.55□□□□□ -0.08
COL9A3-207ENST00000467819 BLNKQ8WV28 456 aa14.55□□□□□ -0.08
COL9A3-207ENST00000467819 TIMM9Q9Y5J7 89 aa14.55□□□□□ -0.08
COL9A3-207ENST00000467819 TRGV1A0A0A0MS02 117 aa14.54□□□□□ -0.08
COL9A3-207ENST00000467819 H2AFB2P0C5Z0 115 aa14.54□□□□□ -0.08
COL9A3-207ENST00000467819 HIST1H1EP10412 219 aaKnown RBP14.54□□□□□ -0.08
COL9A3-207ENST00000467819 CD300CQ08708 224 aa14.54□□□□□ -0.08
COL9A3-207ENST00000467819 EXOC3-AS1Q8N2X6 119 aa14.54□□□□□ -0.08
COL9A3-207ENST00000467819 C11orf72Q8NBR9 251 aa14.54□□□□□ -0.08
COL9A3-207ENST00000467819 VSIG2Q96IQ7 327 aa14.54□□□□□ -0.08
COL9A3-207ENST00000467819 AGPAT4-IT1Q9H0P7 198 aa14.54□□□□□ -0.08
COL9A3-207ENST00000467819 GPN1Q9HCN4 374 aaPredicted RBP14.54□□□□□ -0.08
COL9A3-207ENST00000467819 TMEM14CQ9P0S9 112 aa14.54□□□□□ -0.08
COL9A3-207ENST00000467819 PRELID1Q9Y255 219 aa14.54□□□□□ -0.08
COL9A3-207ENST00000467819 A0A096LPF7 62 aa14.53□□□□□ -0.08
COL9A3-207ENST00000467819 A0A1W2PPQ1 181 aa14.53□□□□□ -0.08
COL9A3-207ENST00000467819 KLLNB2CW77 178 aa14.53□□□□□ -0.08
COL9A3-207ENST00000467819 RNASE4P34096 147 aaKnown RBP14.53□□□□□ -0.08
COL9A3-207ENST00000467819 GCSAMLQ5JQS6 135 aa14.53□□□□□ -0.08
COL9A3-207ENST00000467819 EIF4E3Q8N5X7 224 aaKnown RBP14.53□□□□□ -0.08
COL9A3-207ENST00000467819 LINC00477Q96M19 166 aa14.53□□□□□ -0.08
COL9A3-207ENST00000467819 FUT9Q9Y231 359 aa14.53□□□□□ -0.08
COL9A3-207ENST00000467819 ZNF324O75467 553 aaPredicted RBP14.52□□□□□ -0.09
COL9A3-207ENST00000467819 IL15RAQ13261 267 aa14.52□□□□□ -0.09
COL9A3-207ENST00000467819 PDE6HQ13956 83 aa14.52□□□□□ -0.09
COL9A3-207ENST00000467819 CHAC2Q8WUX2 184 aa14.52□□□□□ -0.09
COL9A3-207ENST00000467819 FAM19A4Q96LR4 140 aa14.52□□□□□ -0.09
COL9A3-207ENST00000467819 KLF12Q9Y4X4 402 aa14.52□□□□□ -0.09
COL9A3-207ENST00000467819 IGKV2-40A0A087WW87 121 aaPredicted RBP14.51□□□□□ -0.09
COL9A3-207ENST00000467819 IGKV2D-40P01614 121 aaPredicted RBP14.51□□□□□ -0.09
COL9A3-207ENST00000467819 GPX1P07203 203 aa14.51□□□□□ -0.09
COL9A3-207ENST00000467819 KRTAP10-2P60368 255 aa14.51□□□□□ -0.09
COL9A3-207ENST00000467819 ATP6V1FQ16864 119 aa14.51□□□□□ -0.09
COL9A3-207ENST00000467819 ANXA2RQ3ZCQ2 193 aa14.51□□□□□ -0.09
COL9A3-207ENST00000467819 AAMDCQ9H7C9 122 aa14.51□□□□□ -0.09
COL9A3-207ENST00000467819 MPDU1O75352 247 aa14.5□□□□□ -0.09
COL9A3-207ENST00000467819 ICAM4Q14773 271 aa14.5□□□□□ -0.09
COL9A3-207ENST00000467819 FAM122CQ6P4D5 195 aa14.5□□□□□ -0.09
COL9A3-207ENST00000467819 LINC00467Q9BRT7 94 aa14.5□□□□□ -0.09
COL9A3-207ENST00000467819 SLC25A2Q9BXI2 301 aa14.5□□□□□ -0.09
COL9A3-207ENST00000467819 NPCDR1Q9BY65 106 aa14.5□□□□□ -0.09
COL9A3-207ENST00000467819 TCL1AP56279 114 aa14.49□□□□□ -0.09
COL9A3-207ENST00000467819 LINC00315P59091 139 aa14.49□□□□□ -0.09
COL9A3-207ENST00000467819 TMEM78Q5T7P6 136 aa14.49□□□□□ -0.09
COL9A3-207ENST00000467819 PRR9Q5T870 116 aa14.49□□□□□ -0.09
COL9A3-207ENST00000467819 C9orf47Q6ZRZ4 202 aa14.49□□□□□ -0.09
COL9A3-207ENST00000467819 THAP6Q8TBB0 222 aa14.49□□□□□ -0.09
COL9A3-207ENST00000467819 C18orf15Q96N68 181 aa14.49□□□□□ -0.09
COL9A3-207ENST00000467819 TP53TG3Q9ULZ0 132 aa14.49□□□□□ -0.09
COL9A3-207ENST00000467819 FAM240BA0A1B0GVZ2 78 aa14.48□□□□□ -0.09
COL9A3-207ENST00000467819 RGS13O14921 159 aa14.48□□□□□ -0.09
COL9A3-207ENST00000467819 SPINK4O60575 86 aa14.48□□□□□ -0.09
COL9A3-207ENST00000467819 IGHV3-53P01767 116 aa14.48□□□□□ -0.09
COL9A3-207ENST00000467819 CRISP2P16562 243 aa14.48□□□□□ -0.09
COL9A3-207ENST00000467819 BTF3P20290 206 aaKnown RBP14.48□□□□□ -0.09
COL9A3-207ENST00000467819 Q6ZQT7 251 aa14.48□□□□□ -0.09
COL9A3-207ENST00000467819 MIR17HGQ75NE6 70 aa14.48□□□□□ -0.09
COL9A3-207ENST00000467819 VGLL1Q99990 258 aa14.48□□□□□ -0.09
COL9A3-207ENST00000467819 PAX4O43316 350 aa14.47□□□□□ -0.09
COL9A3-207ENST00000467819 NHLH2Q02577 135 aa14.47□□□□□ -0.09
COL9A3-207ENST00000467819 Q8N1X5 172 aa14.47□□□□□ -0.09
COL9A3-207ENST00000467819 ZFAND2AQ8N6M9 145 aa14.47□□□□□ -0.09
COL9A3-207ENST00000467819 FAM167A-AS1Q96KT0 104 aa14.47□□□□□ -0.09
COL9A3-207ENST00000467819 CCDC32Q9BV29 185 aa14.47□□□□□ -0.09
COL9A3-207ENST00000467819 MRPL16Q9NX20 251 aaKnown RBP14.47□□□□□ -0.09
COL9A3-207ENST00000467819 ICOSQ9Y6W8 199 aa14.47□□□□□ -0.09
COL9A3-207ENST00000467819 SIVA1O15304 175 aa14.46□□□□□ -0.09
COL9A3-207ENST00000467819 IBA57Q5T440 356 aaKnown RBP14.46□□□□□ -0.09
COL9A3-207ENST00000467819 OR5C1Q8NGR4 320 aa14.46□□□□□ -0.09
COL9A3-207ENST00000467819 ARPC5LQ9BPX5 153 aa14.46□□□□□ -0.09
COL9A3-207ENST00000467819 SCRT2Q9NQ03 307 aa14.46□□□□□ -0.09
COL9A3-207ENST00000467819 IGHV1OR15-1A0A075B7D0 117 aa14.45□□□□□ -0.1
COL9A3-207ENST00000467819 NBEAP1P0C6P0 100 aa14.45□□□□□ -0.1
COL9A3-207ENST00000467819 ST6GAL2Q96JF0 529 aa14.45□□□□□ -0.1
COL9A3-207ENST00000467819 OR51M1Q9H341 326 aa14.45□□□□□ -0.1
COL9A3-207ENST00000467819 NXPH4O95158 308 aa14.44□□□□□ -0.1
COL9A3-207ENST00000467819 SIX6O95475 246 aa14.44□□□□□ -0.1
COL9A3-207ENST00000467819 NMBP08949 121 aa14.44□□□□□ -0.1
COL9A3-207ENST00000467819 OR10J4P0C629 311 aa14.44□□□□□ -0.1
COL9A3-207ENST00000467819 Q8TAT8 98 aa14.44□□□□□ -0.1
COL9A3-207ENST00000467819 PAXXQ9BUH6 204 aa14.44□□□□□ -0.1
COL9A3-207ENST00000467819 ZNF492Q9P255 531 aa14.44□□□□□ -0.1
COL9A3-207ENST00000467819 MZT2BQ6NZ67 158 aa14.43□□□□□ -0.1
COL9A3-207ENST00000467819 PHYHIPLQ96FC7 376 aa14.43□□□□□ -0.1
COL9A3-207ENST00000467819 SLC25A31Q9H0C2 315 aa14.43□□□□□ -0.1
COL9A3-207ENST00000467819 ZNF138P52744 262 aa14.42□□□□□ -0.1
COL9A3-207ENST00000467819 ZNF415Q09FC8 603 aa14.42□□□□□ -0.1
COL9A3-207ENST00000467819 LRRC37A5PQ49AS3 106 aa14.42□□□□□ -0.1
COL9A3-207ENST00000467819 Q6ZRN7 208 aaPredicted RBP14.42□□□□□ -0.1
COL9A3-207ENST00000467819 FXYD5Q96DB9 178 aa14.42□□□□□ -0.1
COL9A3-207ENST00000467819 OR5AC2Q9NZP5 309 aa14.42□□□□□ -0.1
COL9A3-207ENST00000467819 NDUFA13Q9P0J0 144 aa14.42□□□□□ -0.1
COL9A3-207ENST00000467819 PRO0255Q9UI72 69 aa14.42□□□□□ -0.1
COL9A3-207ENST00000467819 E5RGE8 158 aa14.41□□□□□ -0.1
COL9A3-207ENST00000467819 C8orf49Q96NF6 230 aa14.41□□□□□ -0.1
COL9A3-207ENST00000467819 MRPL32Q9BYC8 188 aaKnown RBP14.41□□□□□ -0.1
COL9A3-207ENST00000467819 OR7C2O60412 319 aa14.4□□□□□ -0.1
COL9A3-207ENST00000467819 CRYBA4P53673 196 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms