RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 TMPRSS5Q9H3S3 457 aa8.68□□□□□ -1.02
SHROOM3-202ENST00000466541 OTORQ9NRC9 128 aa8.68□□□□□ -1.02
SHROOM3-202ENST00000466541 TRAV12-3A0A0B4J271 114 aa8.67□□□□□ -1.02
SHROOM3-202ENST00000466541 CTXND1A0A1B0GTU2 59 aa8.67□□□□□ -1.02
SHROOM3-202ENST00000466541 LOC102723971A0A1B0GUV8 181 aa8.67□□□□□ -1.02
SHROOM3-202ENST00000466541 RNASE4P34096 147 aaKnown RBP8.67□□□□□ -1.02
SHROOM3-202ENST00000466541 UBE2G2P60604 165 aa8.67□□□□□ -1.02
SHROOM3-202ENST00000466541 GNG5P63218 68 aa8.67□□□□□ -1.02
SHROOM3-202ENST00000466541 ZNF726P1Q15940 193 aa8.67□□□□□ -1.02
SHROOM3-202ENST00000466541 RRN3P1Q2M238 152 aa8.67□□□□□ -1.02
SHROOM3-202ENST00000466541 LGALSLQ3ZCW2 172 aaPredicted RBP8.67□□□□□ -1.02
SHROOM3-202ENST00000466541 FAM74A1Q5RGS3 127 aa8.67□□□□□ -1.02
SHROOM3-202ENST00000466541 GFI1BQ5VTD9 330 aa8.67□□□□□ -1.02
SHROOM3-202ENST00000466541 LYPD1Q8N2G4 141 aa8.67□□□□□ -1.02
SHROOM3-202ENST00000466541 Q8TAT8 98 aa8.67□□□□□ -1.02
SHROOM3-202ENST00000466541 CELA1Q9UNI1 258 aa8.67□□□□□ -1.02
SHROOM3-202ENST00000466541 A0A1B0GV50 99 aa8.66□□□□□ -1.02
SHROOM3-202ENST00000466541 SMIM9A6NGZ8 99 aa8.66□□□□□ -1.02
SHROOM3-202ENST00000466541 DIRC3C9JPN6 131 aa8.66□□□□□ -1.02
SHROOM3-202ENST00000466541 C1QBP02746 253 aa8.66□□□□□ -1.02
SHROOM3-202ENST00000466541 SLC25A5P05141 298 aaKnown RBP8.66□□□□□ -1.02
SHROOM3-202ENST00000466541 GPX1P07203 203 aa8.66□□□□□ -1.02
SHROOM3-202ENST00000466541 FHITP49789 147 aa8.66□□□□□ -1.02
SHROOM3-202ENST00000466541 GOLT1AQ6ZVE7 132 aa8.66□□□□□ -1.02
SHROOM3-202ENST00000466541 PHLDA1Q8WV24 401 aaPredicted RBP8.66□□□□□ -1.02
SHROOM3-202ENST00000466541 TMED6Q8WW62 240 aa8.66□□□□□ -1.02
SHROOM3-202ENST00000466541 LINC00477Q96M19 166 aa8.66□□□□□ -1.02
SHROOM3-202ENST00000466541 NEU1Q99519 415 aa8.66□□□□□ -1.02
SHROOM3-202ENST00000466541 PLA2G2EQ9NZK7 142 aa8.66□□□□□ -1.02
SHROOM3-202ENST00000466541 MAP1LC3B2A6NCE7 125 aa8.65□□□□□ -1.02
SHROOM3-202ENST00000466541 AZU1P20160 251 aa8.65□□□□□ -1.02
SHROOM3-202ENST00000466541 EIF5AP63241 154 aaKnown RBP8.65□□□□□ -1.02
SHROOM3-202ENST00000466541 BTN1A1Q13410 526 aa8.65□□□□□ -1.02
SHROOM3-202ENST00000466541 C9orf47Q6ZRZ4 202 aa8.65□□□□□ -1.02
SHROOM3-202ENST00000466541 FAM213BQ8TBF2 198 aa8.65□□□□□ -1.02
SHROOM3-202ENST00000466541 RXFP4Q8TDU9 374 aa8.65□□□□□ -1.02
SHROOM3-202ENST00000466541 SGK494Q96LW2 274 aa8.65□□□□□ -1.02
SHROOM3-202ENST00000466541 NIPSNAP3BQ9BS92 247 aa8.65□□□□□ -1.02
SHROOM3-202ENST00000466541 MAP1LC3BQ9GZQ8 125 aa8.65□□□□□ -1.02
SHROOM3-202ENST00000466541 TMEM167BQ9NRX6 74 aa8.65□□□□□ -1.02
SHROOM3-202ENST00000466541 ZNF492Q9P255 531 aa8.65□□□□□ -1.02
SHROOM3-202ENST00000466541 STARD9Q9P2P6 4700 aa8.64□□□□□ -1.03
SHROOM3-202ENST00000466541 C7orf71A4D174 169 aa8.64□□□□□ -1.03
SHROOM3-202ENST00000466541 SEC11BP0C7V7 166 aa8.64□□□□□ -1.03
SHROOM3-202ENST00000466541 TPT1P13693 172 aaKnown RBP8.64□□□□□ -1.03
SHROOM3-202ENST00000466541 ZNF138P52744 262 aa8.64□□□□□ -1.03
SHROOM3-202ENST00000466541 SUMO1P63165 101 aaKnown RBP8.64□□□□□ -1.03
SHROOM3-202ENST00000466541 ZFP69Q49AA0 526 aa8.64□□□□□ -1.03
SHROOM3-202ENST00000466541 FAM222AQ5U5X8 452 aa8.64□□□□□ -1.03
SHROOM3-202ENST00000466541 TMEM256Q8N2U0 113 aa8.64□□□□□ -1.03
SHROOM3-202ENST00000466541 ODF3Q96PU9 254 aa8.64□□□□□ -1.03
SHROOM3-202ENST00000466541 YTHDF2Q9Y5A9 579 aaKnown RBP8.64□□□□□ -1.03
SHROOM3-202ENST00000466541 TRAV8-1A0A0A6YYK1 113 aa8.63□□□□□ -1.03
SHROOM3-202ENST00000466541 TMEM189A5PLL7 270 aa8.63□□□□□ -1.03
SHROOM3-202ENST00000466541 NUPR2A6NF83 97 aa8.63□□□□□ -1.03
SHROOM3-202ENST00000466541 IFNA7P01567 189 aa8.63□□□□□ -1.03
SHROOM3-202ENST00000466541 SPART-AS1P0CW21 52 aa8.63□□□□□ -1.03
SHROOM3-202ENST00000466541 TAS2R60P59551 318 aa8.63□□□□□ -1.03
SHROOM3-202ENST00000466541 C12orf74Q32Q52 190 aa8.63□□□□□ -1.03
SHROOM3-202ENST00000466541 CEMP1Q6PRD7 247 aaPredicted RBP8.63□□□□□ -1.03
SHROOM3-202ENST00000466541 Q6ZQT7 251 aa8.63□□□□□ -1.03
SHROOM3-202ENST00000466541 Q6ZTC4 211 aa8.63□□□□□ -1.03
SHROOM3-202ENST00000466541 STOML3Q8TAV4 291 aa8.63□□□□□ -1.03
SHROOM3-202ENST00000466541 SFT2D1Q8WV19 159 aa8.63□□□□□ -1.03
SHROOM3-202ENST00000466541 H7BYZ3 331 aa8.62□□□□□ -1.03
SHROOM3-202ENST00000466541 HTN3P15516 51 aa8.62□□□□□ -1.03
SHROOM3-202ENST00000466541 PRR9Q5T870 116 aa8.62□□□□□ -1.03
SHROOM3-202ENST00000466541 CCDC28AQ8IWP9 274 aa8.62□□□□□ -1.03
SHROOM3-202ENST00000466541 SUN5Q8TC36 379 aa8.62□□□□□ -1.03
SHROOM3-202ENST00000466541 DKK2Q9UBU2 259 aa8.62□□□□□ -1.03
SHROOM3-202ENST00000466541 KLK5Q9Y337 293 aaPredicted RBP8.62□□□□□ -1.03
SHROOM3-202ENST00000466541 RBAKDNA6NC62 111 aa8.61□□□□□ -1.03
SHROOM3-202ENST00000466541 KLLNB2CW77 178 aa8.61□□□□□ -1.03
SHROOM3-202ENST00000466541 GGTLC3B5MD39 225 aa8.61□□□□□ -1.03
SHROOM3-202ENST00000466541 UMAD1C9J7I0 102 aa8.61□□□□□ -1.03
SHROOM3-202ENST00000466541 RGS13O14921 159 aa8.61□□□□□ -1.03
SHROOM3-202ENST00000466541 DEFB130BP0DP73 79 aa8.61□□□□□ -1.03
SHROOM3-202ENST00000466541 DEFB130AP0DP74 79 aa8.61□□□□□ -1.03
SHROOM3-202ENST00000466541 NKX2-5P52952 324 aaPredicted RBP8.61□□□□□ -1.03
SHROOM3-202ENST00000466541 CST9LP1Q5W188 147 aa8.61□□□□□ -1.03
SHROOM3-202ENST00000466541 ZFAND2AQ8N6M9 145 aa8.61□□□□□ -1.03
SHROOM3-202ENST00000466541 C5orf17Q8NAS9 161 aa8.61□□□□□ -1.03
SHROOM3-202ENST00000466541 FAM19A4Q96LR4 140 aa8.61□□□□□ -1.03
SHROOM3-202ENST00000466541 C20orf144Q9BQM9 153 aa8.61□□□□□ -1.03
SHROOM3-202ENST00000466541 DEFB131BA0A096LNP1 70 aa8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 TRAV34A0A0B4J273 112 aa8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 A0A1W2PRE2 83 aa8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 CBY3A6NI87 242 aa8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 IGLL5B9A064 214 aa8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 F6UZH7 168 aa8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 K7EQM0 130 aa8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 TCRAP04437 139 aa8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 CRISP2P16562 243 aa8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 DAD1P61803 113 aa8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 C9orf62Q8N4C0 152 aa8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 C16orf74Q96GX8 76 aa8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 NOP10Q9NPE3 64 aaKnown RBP8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 NAGKQ9UJ70 344 aa8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 EPDR1Q9UM22 224 aa8.6□□□□□ -1.03
SHROOM3-202ENST00000466541 TRAV10A0A0B4J240 114 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms