RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 FAM19A4Q96LR4 140 aa12.87□□□□□ -0.35
SRSF4-202ENST00000466448 LINC00467Q9BRT7 94 aa12.87□□□□□ -0.35
SRSF4-202ENST00000466448 KLF12Q9Y4X4 402 aa12.87□□□□□ -0.35
SRSF4-202ENST00000466448 TRBV19A0A075B6N1 114 aa12.86□□□□□ -0.35
SRSF4-202ENST00000466448 L7N2F9 121 aa12.86□□□□□ -0.35
SRSF4-202ENST00000466448 CCSO14618 274 aa12.86□□□□□ -0.35
SRSF4-202ENST00000466448 DEFA1P59665 94 aa12.86□□□□□ -0.35
SRSF4-202ENST00000466448 DEFA3P59666 94 aa12.86□□□□□ -0.35
SRSF4-202ENST00000466448 VAMP2P63027 116 aa12.86□□□□□ -0.35
SRSF4-202ENST00000466448 ANXA2RQ3ZCQ2 193 aa12.86□□□□□ -0.35
SRSF4-202ENST00000466448 C12orf45Q8N5I9 185 aaPredicted RBP12.86□□□□□ -0.35
SRSF4-202ENST00000466448 EIF4E3Q8N5X7 224 aaKnown RBP12.86□□□□□ -0.35
SRSF4-202ENST00000466448 OR1L4Q8NGR5 311 aa12.86□□□□□ -0.35
SRSF4-202ENST00000466448 TNFRSF18Q9Y5U5 241 aa12.86□□□□□ -0.35
SRSF4-202ENST00000466448 SPINK4O60575 86 aa12.85□□□□□ -0.35
SRSF4-202ENST00000466448 CST7O76096 145 aa12.85□□□□□ -0.35
SRSF4-202ENST00000466448 NDUFB4O95168 129 aa12.85□□□□□ -0.35
SRSF4-202ENST00000466448 CAV2P51636 162 aa12.85□□□□□ -0.35
SRSF4-202ENST00000466448 XGP55808 180 aa12.85□□□□□ -0.35
SRSF4-202ENST00000466448 TCL1AP56279 114 aa12.85□□□□□ -0.35
SRSF4-202ENST00000466448 ERVFC1-1P60608 527 aa12.85□□□□□ -0.35
SRSF4-202ENST00000466448 LYPD1Q8N2G4 141 aa12.85□□□□□ -0.35
SRSF4-202ENST00000466448 PFDN5Q99471 154 aa12.85□□□□□ -0.35
SRSF4-202ENST00000466448 SEC22CQ9BRL7 303 aa12.85□□□□□ -0.35
SRSF4-202ENST00000466448 WDR83OSQ9Y284 106 aa12.85□□□□□ -0.35
SRSF4-202ENST00000466448 ICOSQ9Y6W8 199 aa12.85□□□□□ -0.35
SRSF4-202ENST00000466448 EREGO14944 169 aa12.84□□□□□ -0.35
SRSF4-202ENST00000466448 PAX4O43316 350 aa12.84□□□□□ -0.35
SRSF4-202ENST00000466448 IGHV3-53P01767 116 aa12.84□□□□□ -0.35
SRSF4-202ENST00000466448 INAFM2P0DMQ5 153 aa12.84□□□□□ -0.35
SRSF4-202ENST00000466448 RNASE4P34096 147 aaKnown RBP12.84□□□□□ -0.35
SRSF4-202ENST00000466448 BCAP31P51572 246 aa12.84□□□□□ -0.35
SRSF4-202ENST00000466448 CDPF1Q6NVV7 123 aa12.84□□□□□ -0.35
SRSF4-202ENST00000466448 ST6GAL2Q96JF0 529 aa12.84□□□□□ -0.35
SRSF4-202ENST00000466448 LINC00477Q96M19 166 aa12.84□□□□□ -0.35
SRSF4-202ENST00000466448 AGPAT4-IT1Q9H0P7 198 aa12.84□□□□□ -0.35
SRSF4-202ENST00000466448 SLC39A9Q9NUM3 307 aa12.84□□□□□ -0.35
SRSF4-202ENST00000466448 UQCC1Q9NVA1 299 aa12.84□□□□□ -0.35
SRSF4-202ENST00000466448 LSM5Q9Y4Y9 91 aaKnown RBP12.84□□□□□ -0.35
SRSF4-202ENST00000466448 RPL29P47914 159 aaKnown RBP12.83□□□□□ -0.36
SRSF4-202ENST00000466448 IFITM3Q01628 133 aa12.83□□□□□ -0.36
SRSF4-202ENST00000466448 VWC2Q2TAL6 325 aa12.83□□□□□ -0.36
SRSF4-202ENST00000466448 C11orf1Q9H5F2 150 aa12.83□□□□□ -0.36
SRSF4-202ENST00000466448 GPN1Q9HCN4 374 aaPredicted RBP12.83□□□□□ -0.36
SRSF4-202ENST00000466448 TMEM14CQ9P0S9 112 aa12.83□□□□□ -0.36
SRSF4-202ENST00000466448 TP53TG3Q9ULZ0 132 aa12.83□□□□□ -0.36
SRSF4-202ENST00000466448 C5orf51A6NDU8 294 aa12.82□□□□□ -0.36
SRSF4-202ENST00000466448 FAM24AA6NFZ4 105 aa12.82□□□□□ -0.36
SRSF4-202ENST00000466448 FAM25EA8MYX2 175 aa12.82□□□□□ -0.36
SRSF4-202ENST00000466448 MPDU1O75352 247 aa12.82□□□□□ -0.36
SRSF4-202ENST00000466448 DNAH10OSP0CZ25 163 aa12.82□□□□□ -0.36
SRSF4-202ENST00000466448 CRISP2P16562 243 aa12.82□□□□□ -0.36
SRSF4-202ENST00000466448 IBA57Q5T440 356 aaKnown RBP12.82□□□□□ -0.36
SRSF4-202ENST00000466448 PRR9Q5T870 116 aa12.82□□□□□ -0.36
SRSF4-202ENST00000466448 Q6ZQT7 251 aa12.82□□□□□ -0.36
SRSF4-202ENST00000466448 EXOC3-AS1Q8N2X6 119 aa12.82□□□□□ -0.36
SRSF4-202ENST00000466448 MRPL16Q9NX20 251 aaKnown RBP12.82□□□□□ -0.36
SRSF4-202ENST00000466448 PRO0255Q9UI72 69 aa12.82□□□□□ -0.36
SRSF4-202ENST00000466448 DMBT1Q9UGM3 2413 aaPredicted RBP12.82□□□□□ -0.36
SRSF4-202ENST00000466448 UBE2L5PA0A1B0GUS4 154 aa12.81□□□□□ -0.36
SRSF4-202ENST00000466448 GPX1P07203 203 aa12.81□□□□□ -0.36
SRSF4-202ENST00000466448 PYYP10082 97 aa12.81□□□□□ -0.36
SRSF4-202ENST00000466448 HIST1H1EP10412 219 aaKnown RBP12.81□□□□□ -0.36
SRSF4-202ENST00000466448 BAXQ07812 192 aa12.81□□□□□ -0.36
SRSF4-202ENST00000466448 LYPD5Q6UWN5 251 aa12.81□□□□□ -0.36
SRSF4-202ENST00000466448 C2orf50Q96LR7 162 aa12.81□□□□□ -0.36
SRSF4-202ENST00000466448 PRELID1Q9Y255 219 aa12.81□□□□□ -0.36
SRSF4-202ENST00000466448 TIMM9Q9Y5J7 89 aa12.81□□□□□ -0.36
SRSF4-202ENST00000466448 A0A087WTM6 91 aa12.8□□□□□ -0.36
SRSF4-202ENST00000466448 PRAF2O60831 178 aa12.8□□□□□ -0.36
SRSF4-202ENST00000466448 CRYBA4P53673 196 aa12.8□□□□□ -0.36
SRSF4-202ENST00000466448 KRTAP10-1P60331 282 aa12.8□□□□□ -0.36
SRSF4-202ENST00000466448 PDE6HQ13956 83 aa12.8□□□□□ -0.36
SRSF4-202ENST00000466448 Q5VSD8 79 aa12.8□□□□□ -0.36
SRSF4-202ENST00000466448 C9orf47Q6ZRZ4 202 aa12.8□□□□□ -0.36
SRSF4-202ENST00000466448 NFE4Q86UQ8 179 aa12.8□□□□□ -0.36
SRSF4-202ENST00000466448 ZFAND2AQ8N6M9 145 aa12.8□□□□□ -0.36
SRSF4-202ENST00000466448 BLNKQ8WV28 456 aa12.8□□□□□ -0.36
SRSF4-202ENST00000466448 C8orf49Q96NF6 230 aa12.8□□□□□ -0.36
SRSF4-202ENST00000466448 VGLL1Q99990 258 aa12.8□□□□□ -0.36
SRSF4-202ENST00000466448 HHLA3Q9XRX5 114 aa12.8□□□□□ -0.36
SRSF4-202ENST00000466448 IGKV2-40A0A087WW87 121 aaPredicted RBP12.79□□□□□ -0.36
SRSF4-202ENST00000466448 INMT-MINDY4F8WBC2 141 aa12.79□□□□□ -0.36
SRSF4-202ENST00000466448 RGS13O14921 159 aa12.79□□□□□ -0.36
SRSF4-202ENST00000466448 IGKV2D-40P01614 121 aaPredicted RBP12.79□□□□□ -0.36
SRSF4-202ENST00000466448 NMBP08949 121 aa12.79□□□□□ -0.36
SRSF4-202ENST00000466448 SULT1A1P50225 295 aa12.79□□□□□ -0.36
SRSF4-202ENST00000466448 FHL2Q14192 279 aa12.79□□□□□ -0.36
SRSF4-202ENST00000466448 CHAC2Q8WUX2 184 aa12.79□□□□□ -0.36
SRSF4-202ENST00000466448 FAT1Q14517 4588 aa12.79□□□□□ -0.36
SRSF4-202ENST00000466448 IGHV1OR15-1A0A075B7D0 117 aa12.78□□□□□ -0.36
SRSF4-202ENST00000466448 IGSF23A1L1A6 192 aa12.78□□□□□ -0.36
SRSF4-202ENST00000466448 S100A11P31949 105 aa12.78□□□□□ -0.36
SRSF4-202ENST00000466448 SLAQ13239 276 aa12.78□□□□□ -0.36
SRSF4-202ENST00000466448 ICAM4Q14773 271 aa12.78□□□□□ -0.36
SRSF4-202ENST00000466448 MRPL23Q16540 153 aaKnown RBP12.78□□□□□ -0.36
SRSF4-202ENST00000466448 GCSAMLQ5JQS6 135 aa12.78□□□□□ -0.36
SRSF4-202ENST00000466448 AAMDCQ9H7C9 122 aa12.78□□□□□ -0.36
SRSF4-202ENST00000466448 LYRM2Q9NU23 88 aaPredicted RBP12.78□□□□□ -0.36
SRSF4-202ENST00000466448 PVALBP20472 110 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms