RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 C11orf94C9JXX5 98 aa7.17□□□□□ -1.26
RTFDC1-205ENST00000466260 SPRY2O43597 315 aa7.17□□□□□ -1.26
RTFDC1-205ENST00000466260 HOXA5P20719 270 aa7.17□□□□□ -1.26
RTFDC1-205ENST00000466260 AKR1C3P42330 323 aa7.17□□□□□ -1.26
RTFDC1-205ENST00000466260 DEFB1P60022 68 aa7.17□□□□□ -1.26
RTFDC1-205ENST00000466260 COX19Q49B96 90 aa7.17□□□□□ -1.26
RTFDC1-205ENST00000466260 C2CD4CQ8TF44 421 aa7.17□□□□□ -1.26
RTFDC1-205ENST00000466260 SLC45A2Q9UMX9 530 aa7.17□□□□□ -1.26
RTFDC1-205ENST00000466260 TENM3Q9P273 2699 aa7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 IGKV3-20P01619 116 aa7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 STAG3L2P0CL84 134 aa7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 STAG3L3P0CL85 134 aa7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 FGF8P55075 233 aaPredicted RBP7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 SNRPD3P62318 126 aaKnown RBP7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 ADIRFQ15847 76 aa7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 CDPF1Q6NVV7 123 aa7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 PQLC2Q6ZP29 291 aa7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 ZFP82Q8N141 532 aa7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 PYGO2Q9BRQ0 406 aa7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 MRPL32Q9BYC8 188 aaKnown RBP7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 CSTL1Q9H114 145 aa7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 PARLQ9H300 379 aa7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 HIGD1AQ9Y241 93 aa7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 PXMP4Q9Y6I8 212 aa7.16□□□□□ -1.26
RTFDC1-205ENST00000466260 KIR2DL5BA0A0G2JN68 375 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 KIR2DL5BA0A0G2JPC4 375 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 A0A0J9YWU9 116 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 C3orf84H3BNL1 204 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 H3BRN7 92 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 EIF3GO75821 320 aaKnown RBP eCLIP7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 TYMSP04818 313 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 SNRPCP09234 159 aaKnown RBP7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 PRB4P10163 310 aaPredicted RBP7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 GALR1P47211 349 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 B2MP61769 119 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 SELENOTP62341 195 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 KIR2DL5AQ8N109 375 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 KIR2DL5BQ8NHK3 375 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 C16orf92Q96LL3 132 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 PFDN5Q99471 154 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 MGST2Q99735 147 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 SLC25A39Q9BZJ4 359 aaPredicted RBP7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 CLEC5AQ9NY25 188 aa7.15□□□□□ -1.26
RTFDC1-205ENST00000466260 DNAH7Q8WXX0 4024 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 C9JCJ5 164 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 COX7A2P2O60397 106 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 PAGE4O60829 102 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 HYPMO75409 117 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 ID1P41134 155 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 FXYD7P58549 80 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 RPL23P62829 140 aaKnown RBP7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 CASC10Q5T4H9 136 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 GDF5OSQ5U4N7 250 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 IGFL4Q6B9Z1 124 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 Q6ZWC4 215 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 TRPT1Q86TN4 253 aaKnown RBP7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 OR1L4Q8NGR5 311 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 GATAD1Q8WUU5 269 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 RNF183Q96D59 192 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 OR51M1Q9H341 326 aa7.14□□□□□ -1.27
RTFDC1-205ENST00000466260 F6UB75 175 aa7.13□□□□□ -1.27
RTFDC1-205ENST00000466260 DEFB4AO15263 64 aa7.13□□□□□ -1.27
RTFDC1-205ENST00000466260 C1orf194Q5T5A4 169 aa7.13□□□□□ -1.27
RTFDC1-205ENST00000466260 CST9LP1Q5W188 147 aa7.13□□□□□ -1.27
RTFDC1-205ENST00000466260 MIC13Q5XKP0 118 aa7.13□□□□□ -1.27
RTFDC1-205ENST00000466260 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.13□□□□□ -1.27
RTFDC1-205ENST00000466260 S100A7AQ86SG5 101 aa7.13□□□□□ -1.27
RTFDC1-205ENST00000466260 OR4B1Q8NGF8 309 aa7.13□□□□□ -1.27
RTFDC1-205ENST00000466260 OR11H2Q8NH07 326 aa7.13□□□□□ -1.27
RTFDC1-205ENST00000466260 C11orf52Q96A22 123 aa7.13□□□□□ -1.27
RTFDC1-205ENST00000466260 SHANK2-AS3Q9BTD1 123 aa7.13□□□□□ -1.27
RTFDC1-205ENST00000466260 TP53TG1Q9Y2A0 90 aa7.13□□□□□ -1.27
RTFDC1-205ENST00000466260 RFNGQ9Y644 331 aa7.13□□□□□ -1.27
RTFDC1-205ENST00000466260 STARD9Q9P2P6 4700 aa7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 H3BTX0 84 aa7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 SOCS3O14543 225 aa7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 PFN1P07737 140 aaKnown RBP7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 GCHFRP30047 84 aa7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 S100A7P31151 101 aa7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 NDUFA6P56556 154 aa7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 COA6Q5JTJ3 125 aaKnown RBP7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 PATE2Q6UY27 113 aa7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 SSX7Q7RTT5 188 aa7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 LINC00305Q7Z4B0 112 aa7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 RNF182Q8N6D2 247 aa7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 C20orf173Q96LM9 149 aa7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 FUT9Q9Y231 359 aa7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 URGCP-MRPS24S4R325 110 aa7.12□□□□□ -1.27
RTFDC1-205ENST00000466260 TGIF2-C20orf24A0A0A6YYL0 155 aa7.11□□□□□ -1.27
RTFDC1-205ENST00000466260 A0A1W2PRE2 83 aa7.11□□□□□ -1.27
RTFDC1-205ENST00000466260 HIST1H2BKO60814 126 aa7.11□□□□□ -1.27
RTFDC1-205ENST00000466260 HIST1H2BJP06899 126 aa7.11□□□□□ -1.27
RTFDC1-205ENST00000466260 CXCL1P09341 107 aa7.11□□□□□ -1.27
RTFDC1-205ENST00000466260 ZNF705DP0CH99 300 aaPredicted RBP7.11□□□□□ -1.27
RTFDC1-205ENST00000466260 ZNF705BP0CI00 300 aaPredicted RBP7.11□□□□□ -1.27
RTFDC1-205ENST00000466260 ARL14EPLP0DKL9 152 aa7.11□□□□□ -1.27
RTFDC1-205ENST00000466260 HLA-DRB4P13762 266 aa7.11□□□□□ -1.27
RTFDC1-205ENST00000466260 RPL7P18124 248 aaKnown RBP7.11□□□□□ -1.27
RTFDC1-205ENST00000466260 HIST1H2BOP23527 126 aa7.11□□□□□ -1.27
RTFDC1-205ENST00000466260 HLA-DMBP28068 263 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms