RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 SH3BGRL3Q9H299 93 aa7.25□□□□□ -1.25
CD40-204ENST00000466205 Q9H3A6 140 aa7.25□□□□□ -1.25
CD40-204ENST00000466205 PLAC8L1A1L4L8 177 aa7.24□□□□□ -1.25
CD40-204ENST00000466205 RNF222A6NCQ9 220 aa7.24□□□□□ -1.25
CD40-204ENST00000466205 M6PRP20645 277 aa7.24□□□□□ -1.25
CD40-204ENST00000466205 ATP6V0CP27449 155 aa7.24□□□□□ -1.25
CD40-204ENST00000466205 TSPOP30536 169 aa7.24□□□□□ -1.25
CD40-204ENST00000466205 TAS2R45P59539 299 aa7.24□□□□□ -1.25
CD40-204ENST00000466205 ZNF266Q14584 549 aa7.24□□□□□ -1.25
CD40-204ENST00000466205 KHDC3LQ587J8 217 aa7.24□□□□□ -1.25
CD40-204ENST00000466205 RPL7L1Q6DKI1 246 aaKnown RBP7.24□□□□□ -1.25
CD40-204ENST00000466205 Q6ZQT7 251 aa7.24□□□□□ -1.25
CD40-204ENST00000466205 INO80EQ8NBZ0 244 aaPredicted RBP7.24□□□□□ -1.25
CD40-204ENST00000466205 PRELID1Q9Y255 219 aa7.24□□□□□ -1.25
CD40-204ENST00000466205 H7BYZ3 331 aa7.23□□□□□ -1.25
CD40-204ENST00000466205 ARPC5O15511 151 aa7.23□□□□□ -1.25
CD40-204ENST00000466205 RNASE4P34096 147 aaKnown RBP7.23□□□□□ -1.25
CD40-204ENST00000466205 PRR9Q5T870 116 aa7.23□□□□□ -1.25
CD40-204ENST00000466205 LGALS9CQ6DKI2 356 aa7.23□□□□□ -1.25
CD40-204ENST00000466205 TMEM256Q8N2U0 113 aa7.23□□□□□ -1.25
CD40-204ENST00000466205 C16orf74Q96GX8 76 aa7.23□□□□□ -1.25
CD40-204ENST00000466205 NOP10Q9NPE3 64 aaKnown RBP7.23□□□□□ -1.25
CD40-204ENST00000466205 TNFSF18Q9UNG2 199 aa7.23□□□□□ -1.25
CD40-204ENST00000466205 VPS13DQ5THJ4 4388 aa7.22□□□□□ -1.25
CD40-204ENST00000466205 TEX48A0A1B0GUV7 120 aa7.22□□□□□ -1.25
CD40-204ENST00000466205 C7orf71A4D174 169 aa7.22□□□□□ -1.25
CD40-204ENST00000466205 PGPA6NDG6 321 aa7.22□□□□□ -1.25
CD40-204ENST00000466205 GPX1P07203 203 aa7.22□□□□□ -1.25
CD40-204ENST00000466205 CSN1S1P47710 185 aa7.22□□□□□ -1.25
CD40-204ENST00000466205 CDC34P49427 236 aaPredicted RBP7.22□□□□□ -1.25
CD40-204ENST00000466205 GNG5P63218 68 aa7.22□□□□□ -1.25
CD40-204ENST00000466205 TMEM78Q5T7P6 136 aa7.22□□□□□ -1.25
CD40-204ENST00000466205 CCDC28AQ8IWP9 274 aa7.22□□□□□ -1.25
CD40-204ENST00000466205 IQCF2Q8IXL9 164 aa7.22□□□□□ -1.25
CD40-204ENST00000466205 RNASE8Q8TDE3 154 aaKnown RBP7.22□□□□□ -1.25
CD40-204ENST00000466205 LINC00477Q96M19 166 aa7.22□□□□□ -1.25
CD40-204ENST00000466205 NDUFAF3Q9BU61 184 aa7.22□□□□□ -1.25
CD40-204ENST00000466205 LYRM9A8MSI8 78 aa7.21□□□□□ -1.26
CD40-204ENST00000466205 SLC25A5P05141 298 aaKnown RBP7.21□□□□□ -1.26
CD40-204ENST00000466205 ARL14EPLP0DKL9 152 aa7.21□□□□□ -1.26
CD40-204ENST00000466205 TMEM88Q6PEY1 159 aa7.21□□□□□ -1.26
CD40-204ENST00000466205 C9orf47Q6ZRZ4 202 aa7.21□□□□□ -1.26
CD40-204ENST00000466205 SSX7Q7RTT5 188 aa7.21□□□□□ -1.26
CD40-204ENST00000466205 TMEM263Q8WUH6 116 aaKnown RBP7.21□□□□□ -1.26
CD40-204ENST00000466205 ASB13Q8WXK3 278 aa7.21□□□□□ -1.26
CD40-204ENST00000466205 FAM19A4Q96LR4 140 aa7.21□□□□□ -1.26
CD40-204ENST00000466205 ODF3Q96PU9 254 aa7.21□□□□□ -1.26
CD40-204ENST00000466205 BORCS7-ASMTA0A0B4J1R7 106 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 GAGE12BA1L429 117 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 CBY3A6NI87 242 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 SNURFLB1AK76 121 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 DIRC3C9JPN6 131 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 F5H768 121 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 GAGE7O76087 117 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 GAGE12FP0CL80 117 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 GAGE12GP0CL81 117 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 GAGE12IP0CL82 117 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 ZNF138P52744 262 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 TCTAP57738 103 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 TCTE3Q8IZS6 198 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 ZFAND2AQ8N6M9 145 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 OR2G3Q8NGZ4 309 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 CMTM2Q8TAZ6 248 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 RAB24Q969Q5 203 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 SGK494Q96LW2 274 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 C20orf144Q9BQM9 153 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 PSMG3Q9BT73 122 aaPredicted RBP7.2□□□□□ -1.26
CD40-204ENST00000466205 GSN-AS1Q9NRJ2 163 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 ZNF492Q9P255 531 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 TP53TG3Q9ULZ0 132 aa7.2□□□□□ -1.26
CD40-204ENST00000466205 TIMM8BQ9Y5J9 83 aaPredicted RBP7.2□□□□□ -1.26
CD40-204ENST00000466205 KLLNB2CW77 178 aa7.19□□□□□ -1.26
CD40-204ENST00000466205 ZNF324O75467 553 aaPredicted RBP7.19□□□□□ -1.26
CD40-204ENST00000466205 STAG3L2P0CL84 134 aa7.19□□□□□ -1.26
CD40-204ENST00000466205 STAG3L3P0CL85 134 aa7.19□□□□□ -1.26
CD40-204ENST00000466205 MUC21Q5SSG8 566 aa7.19□□□□□ -1.26
CD40-204ENST00000466205 PQLC2Q6ZP29 291 aa7.19□□□□□ -1.26
CD40-204ENST00000466205 GOLT1AQ6ZVE7 132 aa7.19□□□□□ -1.26
CD40-204ENST00000466205 AKAP14Q86UN6 197 aa7.19□□□□□ -1.26
CD40-204ENST00000466205 UBE2DNLQ8IWF7 75 aa7.19□□□□□ -1.26
CD40-204ENST00000466205 LYPD1Q8N2G4 141 aa7.19□□□□□ -1.26
CD40-204ENST00000466205 OR11H4Q8NGC9 324 aa7.19□□□□□ -1.26
CD40-204ENST00000466205 PYGO2Q9BRQ0 406 aa7.19□□□□□ -1.26
CD40-204ENST00000466205 OTORQ9NRC9 128 aa7.19□□□□□ -1.26
CD40-204ENST00000466205 TRAV8-1A0A0A6YYK1 113 aa7.18□□□□□ -1.26
CD40-204ENST00000466205 F6UZH7 168 aa7.18□□□□□ -1.26
CD40-204ENST00000466205 RGS13O14921 159 aa7.18□□□□□ -1.26
CD40-204ENST00000466205 ATP5G1P05496 136 aa7.18□□□□□ -1.26
CD40-204ENST00000466205 CRISP2P16562 243 aa7.18□□□□□ -1.26
CD40-204ENST00000466205 GCHFRP30047 84 aa7.18□□□□□ -1.26
CD40-204ENST00000466205 ATP5G3P48201 142 aa7.18□□□□□ -1.26
CD40-204ENST00000466205 FGF8P55075 233 aaPredicted RBP7.18□□□□□ -1.26
CD40-204ENST00000466205 FAM74A1Q5RGS3 127 aa7.18□□□□□ -1.26
CD40-204ENST00000466205 ZNF493Q6ZR52 646 aa7.18□□□□□ -1.26
CD40-204ENST00000466205 EIF4E3Q8N5X7 224 aaKnown RBP7.18□□□□□ -1.26
CD40-204ENST00000466205 RXFP4Q8TDU9 374 aa7.18□□□□□ -1.26
CD40-204ENST00000466205 ACTR3CQ9C0K3 210 aaPredicted RBP7.18□□□□□ -1.26
CD40-204ENST00000466205 CYTL1Q9NRR1 136 aa7.18□□□□□ -1.26
CD40-204ENST00000466205 NAGKQ9UJ70 344 aa7.18□□□□□ -1.26
CD40-204ENST00000466205 KLF12Q9Y4X4 402 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms