RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 CYB5R2Q6BCY4 276 aa14.09□□□□□ -0.15
LETM1-202ENST00000466175 GATD1Q8NB37 220 aa14.09□□□□□ -0.15
LETM1-202ENST00000466175 SMR3AQ99954 134 aa14.09□□□□□ -0.15
LETM1-202ENST00000466175 IGKV2-40A0A087WW87 121 aaPredicted RBP14.08□□□□□ -0.15
LETM1-202ENST00000466175 F2Z2F3 143 aa14.08□□□□□ -0.15
LETM1-202ENST00000466175 SCGB1D1O95968 90 aa14.08□□□□□ -0.15
LETM1-202ENST00000466175 IGKV2D-40P01614 121 aaPredicted RBP14.08□□□□□ -0.15
LETM1-202ENST00000466175 IGHG4P01861 327 aa14.08□□□□□ -0.15
LETM1-202ENST00000466175 C8orf49Q96NF6 230 aa14.08□□□□□ -0.15
LETM1-202ENST00000466175 NAGKQ9UJ70 344 aa14.08□□□□□ -0.15
LETM1-202ENST00000466175 IGHV3OR16-8A0A075B7F1 116 aa14.08□□□□□ -0.16
LETM1-202ENST00000466175 A0A1W2PS18 150 aa14.08□□□□□ -0.16
LETM1-202ENST00000466175 TMEM189A5PLL7 270 aa14.08□□□□□ -0.16
LETM1-202ENST00000466175 ZNF324O75467 553 aaPredicted RBP14.08□□□□□ -0.16
LETM1-202ENST00000466175 IGLV1-40P01703 118 aa14.08□□□□□ -0.16
LETM1-202ENST00000466175 APOHP02749 345 aaPredicted RBP14.08□□□□□ -0.16
LETM1-202ENST00000466175 LURAP1LQ8IV03 231 aa14.08□□□□□ -0.16
LETM1-202ENST00000466175 LINC00527Q9UJ94 153 aa14.08□□□□□ -0.16
LETM1-202ENST00000466175 SH2D1AO60880 128 aa14.07□□□□□ -0.16
LETM1-202ENST00000466175 TMEM89A2RUT3 159 aa14.06□□□□□ -0.16
LETM1-202ENST00000466175 Q6ZWC4 215 aa14.06□□□□□ -0.16
LETM1-202ENST00000466175 SSBP4Q9BWG4 385 aaPredicted RBP14.06□□□□□ -0.16
LETM1-202ENST00000466175 TGFAP01135 160 aa14.05□□□□□ -0.16
LETM1-202ENST00000466175 PF4V1P10720 104 aa14.05□□□□□ -0.16
LETM1-202ENST00000466175 AMTP48728 403 aa14.05□□□□□ -0.16
LETM1-202ENST00000466175 BLCAPP62952 87 aa14.05□□□□□ -0.16
LETM1-202ENST00000466175 CTAG1AP78358 180 aa14.05□□□□□ -0.16
LETM1-202ENST00000466175 CFHR3Q02985 330 aa14.05□□□□□ -0.16
LETM1-202ENST00000466175 GLMPQ8WWB7 406 aa14.05□□□□□ -0.16
LETM1-202ENST00000466175 RCHY1Q96PM5 261 aa14.05□□□□□ -0.16
LETM1-202ENST00000466175 VGLL1Q99990 258 aa14.05□□□□□ -0.16
LETM1-202ENST00000466175 LOC102724200A0A096LPH7 203 aaPredicted RBP14.04□□□□□ -0.16
LETM1-202ENST00000466175 C9orf139Q6ZV77 190 aa14.04□□□□□ -0.16
LETM1-202ENST00000466175 Q71RC1 249 aaPredicted RBP14.04□□□□□ -0.16
LETM1-202ENST00000466175 PPP1R14DQ9NXH3 145 aa14.04□□□□□ -0.16
LETM1-202ENST00000466175 DEFB112Q30KQ8 113 aa14.04□□□□□ -0.16
LETM1-202ENST00000466175 C8orf86Q6ZUL3 223 aa14.04□□□□□ -0.16
LETM1-202ENST00000466175 FABP5P3A8MUU1 101 aa14.03□□□□□ -0.16
LETM1-202ENST00000466175 ZNF705FA8MVS1 300 aaPredicted RBP14.03□□□□□ -0.16
LETM1-202ENST00000466175 HLA-DMBP28068 263 aa14.03□□□□□ -0.16
LETM1-202ENST00000466175 OR4X2Q8NGF9 303 aa14.03□□□□□ -0.16
LETM1-202ENST00000466175 ASCL2Q99929 193 aa14.03□□□□□ -0.16
LETM1-202ENST00000466175 NRN1Q9NPD7 142 aa14.03□□□□□ -0.16
LETM1-202ENST00000466175 IGHV3-66A0A0C4DH42 116 aa14.02□□□□□ -0.16
LETM1-202ENST00000466175 HSBP1O75506 76 aa14.02□□□□□ -0.16
LETM1-202ENST00000466175 FSHBP01225 129 aa14.02□□□□□ -0.16
LETM1-202ENST00000466175 RAB4AP20338 218 aa14.02□□□□□ -0.16
LETM1-202ENST00000466175 IGFL4Q6B9Z1 124 aa14.02□□□□□ -0.16
LETM1-202ENST00000466175 ZNF493Q6ZR52 646 aa14.02□□□□□ -0.16
LETM1-202ENST00000466175 ZNF664Q8N3J9 261 aa14.02□□□□□ -0.16
LETM1-202ENST00000466175 CHCHD1Q96BP2 118 aaKnown RBP14.02□□□□□ -0.16
LETM1-202ENST00000466175 SONP18583 2426 aaKnown RBP14.02□□□□□ -0.17
LETM1-202ENST00000466175 TRAV8-2A0A0B4J237 113 aa14.01□□□□□ -0.17
LETM1-202ENST00000466175 ZNF207O43670 478 aaKnown RBP14.01□□□□□ -0.17
LETM1-202ENST00000466175 ARMS2P0C7Q2 107 aa14.01□□□□□ -0.17
LETM1-202ENST00000466175 ZNF705DP0CH99 300 aaPredicted RBP14.01□□□□□ -0.17
LETM1-202ENST00000466175 ZNF705BP0CI00 300 aaPredicted RBP14.01□□□□□ -0.17
LETM1-202ENST00000466175 DDTP30046 118 aa14.01□□□□□ -0.17
LETM1-202ENST00000466175 TMEM78Q5T7P6 136 aa14.01□□□□□ -0.17
LETM1-202ENST00000466175 C9orf47Q6ZRZ4 202 aa14.01□□□□□ -0.17
LETM1-202ENST00000466175 NPFFR1Q9GZQ6 430 aa14.01□□□□□ -0.17
LETM1-202ENST00000466175 IGHV4-59P01825 116 aa14.01□□□□□ -0.17
LETM1-202ENST00000466175 IGHV4-31P0DP07 118 aa14.01□□□□□ -0.17
LETM1-202ENST00000466175 PMCHP20382 165 aa14.01□□□□□ -0.17
LETM1-202ENST00000466175 DEFA6Q01524 100 aa14.01□□□□□ -0.17
LETM1-202ENST00000466175 LENEPQ9Y5L5 61 aa14.01□□□□□ -0.17
LETM1-202ENST00000466175 LY6G6DO95868 133 aa14□□□□□ -0.17
LETM1-202ENST00000466175 FOSL1P15407 271 aa14□□□□□ -0.17
LETM1-202ENST00000466175 CTRLP40313 264 aa14□□□□□ -0.17
LETM1-202ENST00000466175 ZNF138P52744 262 aa14□□□□□ -0.17
LETM1-202ENST00000466175 HIST1H1AQ02539 215 aaPredicted RBP14□□□□□ -0.17
LETM1-202ENST00000466175 TEX43Q6ZNM6 134 aa14□□□□□ -0.17
LETM1-202ENST00000466175 RNF182Q8N6D2 247 aa14□□□□□ -0.17
LETM1-202ENST00000466175 Q8TAT8 98 aa14□□□□□ -0.17
LETM1-202ENST00000466175 C16orf92Q96LL3 132 aa14□□□□□ -0.17
LETM1-202ENST00000466175 KLK15Q9H2R5 256 aa14□□□□□ -0.17
LETM1-202ENST00000466175 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.99□□□□□ -0.173e-7■■■■□ 22
LETM1-202ENST00000466175 PRAC2D3DTV9 90 aa13.99□□□□□ -0.17
LETM1-202ENST00000466175 K7EMT4 169 aa13.99□□□□□ -0.17
LETM1-202ENST00000466175 LYZL1Q6UWQ5 148 aa13.99□□□□□ -0.17
LETM1-202ENST00000466175 NIT1Q86X76 327 aa13.99□□□□□ -0.17
LETM1-202ENST00000466175 PRO1933Q9H354 126 aa13.99□□□□□ -0.17
LETM1-202ENST00000466175 IGHV3OR16-13A0A075B7E8 117 aa13.98□□□□□ -0.17
LETM1-202ENST00000466175 IGHV3-49A0A0A0MS15 119 aa13.98□□□□□ -0.17
LETM1-202ENST00000466175 IGHV3-74A0A0B4J1X5 117 aa13.98□□□□□ -0.17
LETM1-202ENST00000466175 TRBV12-3P01733 135 aa13.98□□□□□ -0.17
LETM1-202ENST00000466175 LINC01559Q495D7 138 aa13.98□□□□□ -0.17
LETM1-202ENST00000466175 SAMD13Q5VXD3 122 aa13.98□□□□□ -0.17
LETM1-202ENST00000466175 RNASEKQ6P5S7 137 aaKnown RBP13.98□□□□□ -0.17
LETM1-202ENST00000466175 Q6ZS46 218 aa13.98□□□□□ -0.17
LETM1-202ENST00000466175 FER1L6-AS1Q8NA97 138 aa13.98□□□□□ -0.17
LETM1-202ENST00000466175 AGPAT4-IT1Q9H0P7 198 aa13.98□□□□□ -0.17
LETM1-202ENST00000466175 PEF1Q9UBV8 284 aaKnown RBP13.98□□□□□ -0.17
LETM1-202ENST00000466175 VPREB3Q9UKI3 123 aa13.98□□□□□ -0.17
LETM1-202ENST00000466175 SETD2Q9BYW2 2564 aaPredicted RBP13.97□□□□□ -0.17
LETM1-202ENST00000466175 IGHV3-11P01762 117 aa13.97□□□□□ -0.17
LETM1-202ENST00000466175 IGLC6P0CF74 106 aa13.97□□□□□ -0.17
LETM1-202ENST00000466175 PSMB8P28062 276 aa13.97□□□□□ -0.17
LETM1-202ENST00000466175 ZNF80P51504 273 aaPredicted RBP13.97□□□□□ -0.17
LETM1-202ENST00000466175 KRTDAPP60985 99 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 389.2 ms