RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 OR5C1Q8NGR4 320 aa13.17□□□□□ -0.3
SF3A1-205ENST00000463818 THAP6Q8TBB0 222 aa13.17□□□□□ -0.3
SF3A1-205ENST00000463818 BLNKQ8WV28 456 aa13.17□□□□□ -0.3
SF3A1-205ENST00000463818 MED28Q9H204 178 aa13.17□□□□□ -0.3
SF3A1-205ENST00000463818 PRELID1Q9Y255 219 aa13.17□□□□□ -0.3
SF3A1-205ENST00000463818 LINC00588Q9Y4M8 146 aa13.17□□□□□ -0.3
SF3A1-205ENST00000463818 DYNC1H1Q14204 4646 aaKnown RBP13.16□□□□□ -0.3
SF3A1-205ENST00000463818 SLC25A5P05141 298 aaKnown RBP13.16□□□□□ -0.3
SF3A1-205ENST00000463818 PDE6HQ13956 83 aa13.16□□□□□ -0.3
SF3A1-205ENST00000463818 EXOC3-AS1Q8N2X6 119 aa13.16□□□□□ -0.3
SF3A1-205ENST00000463818 LINC00477Q96M19 166 aa13.16□□□□□ -0.3
SF3A1-205ENST00000463818 PYGO2Q9BRQ0 406 aa13.16□□□□□ -0.3
SF3A1-205ENST00000463818 SLC25A2Q9BXI2 301 aa13.16□□□□□ -0.3
SF3A1-205ENST00000463818 AGPAT4-IT1Q9H0P7 198 aa13.16□□□□□ -0.3
SF3A1-205ENST00000463818 NBDYA0A0U1RRE5 68 aa13.15□□□□□ -0.3
SF3A1-205ENST00000463818 GIPP09681 153 aaPredicted RBP13.15□□□□□ -0.3
SF3A1-205ENST00000463818 CLINT1Q14677 625 aa13.15□□□□□ -0.3
SF3A1-205ENST00000463818 MBD2Q9UBB5 411 aa13.15□□□□□ -0.3
SF3A1-205ENST00000463818 NACAE9PAV3 2078 aa13.15□□□□□ -0.3
SF3A1-205ENST00000463818 TRAV26-1A0A087WT03 109 aa13.14□□□□□ -0.31
SF3A1-205ENST00000463818 C7orf71A4D174 169 aa13.14□□□□□ -0.31
SF3A1-205ENST00000463818 MED14OSP0DP75 135 aa13.14□□□□□ -0.31
SF3A1-205ENST00000463818 DAZ2Q13117 558 aaKnown RBP13.14□□□□□ -0.31
SF3A1-205ENST00000463818 MIR17HGQ75NE6 70 aa13.14□□□□□ -0.31
SF3A1-205ENST00000463818 GNPNAT1Q96EK6 184 aaPredicted RBP13.14□□□□□ -0.31
SF3A1-205ENST00000463818 FAM167A-AS1Q96KT0 104 aa13.14□□□□□ -0.31
SF3A1-205ENST00000463818 AAMDCQ9H7C9 122 aa13.14□□□□□ -0.31
SF3A1-205ENST00000463818 HSPB11Q9Y547 144 aa13.14□□□□□ -0.31
SF3A1-205ENST00000463818 PKD1P98161 4303 aa13.14□□□□□ -0.31
SF3A1-205ENST00000463818 A0A0J9YY99 117 aa13.13□□□□□ -0.31
SF3A1-205ENST00000463818 KLLNB2CW77 178 aa13.13□□□□□ -0.31
SF3A1-205ENST00000463818 ZNF324O75467 553 aaPredicted RBP13.13□□□□□ -0.31
SF3A1-205ENST00000463818 NBEAP1P0C6P0 100 aa13.13□□□□□ -0.31
SF3A1-205ENST00000463818 M6PRP20645 277 aa13.13□□□□□ -0.31
SF3A1-205ENST00000463818 HOXA5P20719 270 aa13.13□□□□□ -0.31
SF3A1-205ENST00000463818 RNASE4P34096 147 aaKnown RBP13.13□□□□□ -0.31
SF3A1-205ENST00000463818 CD300CQ08708 224 aa13.13□□□□□ -0.31
SF3A1-205ENST00000463818 ICAM4Q14773 271 aa13.13□□□□□ -0.31
SF3A1-205ENST00000463818 SSX7Q7RTT5 188 aa13.13□□□□□ -0.31
SF3A1-205ENST00000463818 RXFP4Q8TDU9 374 aa13.13□□□□□ -0.31
SF3A1-205ENST00000463818 FAM19A4Q96LR4 140 aa13.13□□□□□ -0.31
SF3A1-205ENST00000463818 OR51M1Q9H341 326 aa13.13□□□□□ -0.31
SF3A1-205ENST00000463818 RPL12P30050 165 aaKnown RBP13.12□□□□□ -0.31
SF3A1-205ENST00000463818 C9orf47Q6ZRZ4 202 aa13.12□□□□□ -0.31
SF3A1-205ENST00000463818 Q6ZTI0 123 aa13.12□□□□□ -0.31
SF3A1-205ENST00000463818 WDR61Q9GZS3 305 aaKnown RBP13.12□□□□□ -0.31
SF3A1-205ENST00000463818 GSN-AS1Q9NRJ2 163 aa13.12□□□□□ -0.31
SF3A1-205ENST00000463818 PKHD1P08F94 4074 aa13.12□□□□□ -0.31
SF3A1-205ENST00000463818 GPX1P07203 203 aa13.11□□□□□ -0.31
SF3A1-205ENST00000463818 BTN1A1Q13410 526 aa13.11□□□□□ -0.31
SF3A1-205ENST00000463818 FAM122CQ6P4D5 195 aa13.11□□□□□ -0.31
SF3A1-205ENST00000463818 C6orf223Q8N319 242 aa13.11□□□□□ -0.31
SF3A1-205ENST00000463818 ZNF503Q96F45 646 aa13.11□□□□□ -0.31
SF3A1-205ENST00000463818 ATP5SQ99766 215 aa13.11□□□□□ -0.31
SF3A1-205ENST00000463818 VGLL1Q99990 258 aa13.11□□□□□ -0.31
SF3A1-205ENST00000463818 LINC00467Q9BRT7 94 aa13.11□□□□□ -0.31
SF3A1-205ENST00000463818 IGKV2-40A0A087WW87 121 aaPredicted RBP13.1□□□□□ -0.31
SF3A1-205ENST00000463818 IGKV2D-40P01614 121 aaPredicted RBP13.1□□□□□ -0.31
SF3A1-205ENST00000463818 CRISP2P16562 243 aa13.1□□□□□ -0.31
SF3A1-205ENST00000463818 ANXA2RQ3ZCQ2 193 aa13.1□□□□□ -0.31
SF3A1-205ENST00000463818 TMEM78Q5T7P6 136 aa13.1□□□□□ -0.31
SF3A1-205ENST00000463818 EIF4E3Q8N5X7 224 aaKnown RBP13.1□□□□□ -0.31
SF3A1-205ENST00000463818 C11orf72Q8NBR9 251 aa13.1□□□□□ -0.31
SF3A1-205ENST00000463818 AQP10Q96PS8 301 aa13.1□□□□□ -0.31
SF3A1-205ENST00000463818 PAXXQ9BUH6 204 aa13.1□□□□□ -0.31
SF3A1-205ENST00000463818 TMPRSS5Q9H3S3 457 aa13.1□□□□□ -0.31
SF3A1-205ENST00000463818 Q9H8V8 135 aa13.1□□□□□ -0.31
SF3A1-205ENST00000463818 NMBP08949 121 aa13.09□□□□□ -0.31
SF3A1-205ENST00000463818 OR10J4P0C629 311 aa13.09□□□□□ -0.31
SF3A1-205ENST00000463818 TNP2Q05952 138 aa13.09□□□□□ -0.31
SF3A1-205ENST00000463818 ZNF575Q86XF7 245 aa13.09□□□□□ -0.31
SF3A1-205ENST00000463818 ZNF680Q8NEM1 530 aa13.09□□□□□ -0.31
SF3A1-205ENST00000463818 FXYD5Q96DB9 178 aa13.09□□□□□ -0.31
SF3A1-205ENST00000463818 MRPL32Q9BYC8 188 aaKnown RBP13.09□□□□□ -0.31
SF3A1-205ENST00000463818 KCNIP2Q9NS61 270 aa13.09□□□□□ -0.31
SF3A1-205ENST00000463818 ZNF492Q9P255 531 aa13.09□□□□□ -0.31
SF3A1-205ENST00000463818 FUT9Q9Y231 359 aa13.09□□□□□ -0.31
SF3A1-205ENST00000463818 TRGV2A0A075B6R0 118 aa13.08□□□□□ -0.32
SF3A1-205ENST00000463818 C17orf112F2Z3M2 114 aa13.08□□□□□ -0.32
SF3A1-205ENST00000463818 G3V3Q6 166 aa13.08□□□□□ -0.32
SF3A1-205ENST00000463818 H3BNG1 76 aa13.08□□□□□ -0.32
SF3A1-205ENST00000463818 ESRGQ1W209 222 aa13.08□□□□□ -0.32
SF3A1-205ENST00000463818 ZFAND2AQ8N6M9 145 aa13.08□□□□□ -0.32
SF3A1-205ENST00000463818 KLF12Q9Y4X4 402 aa13.08□□□□□ -0.32
SF3A1-205ENST00000463818 TRGV1A0A0A0MS02 117 aa13.07□□□□□ -0.32
SF3A1-205ENST00000463818 Q5BKY6 102 aa13.07□□□□□ -0.32
SF3A1-205ENST00000463818 Q6ZQT7 251 aa13.07□□□□□ -0.32
SF3A1-205ENST00000463818 PHYHIPLQ96FC7 376 aa13.07□□□□□ -0.32
SF3A1-205ENST00000463818 RGS13O14921 159 aa13.06□□□□□ -0.32
SF3A1-205ENST00000463818 OR7C2O60412 319 aa13.06□□□□□ -0.32
SF3A1-205ENST00000463818 ZNF138P52744 262 aa13.06□□□□□ -0.32
SF3A1-205ENST00000463818 RANP62826 216 aaKnown RBP13.06□□□□□ -0.32
SF3A1-205ENST00000463818 PRR9Q5T870 116 aa13.06□□□□□ -0.32
SF3A1-205ENST00000463818 C18orf15Q96N68 181 aa13.06□□□□□ -0.32
SF3A1-205ENST00000463818 TP53TG3Q9ULZ0 132 aa13.06□□□□□ -0.32
SF3A1-205ENST00000463818 IGHV1OR15-1A0A075B7D0 117 aa13.05□□□□□ -0.32
SF3A1-205ENST00000463818 SPINK4O60575 86 aa13.05□□□□□ -0.32
SF3A1-205ENST00000463818 FFAR4Q5NUL3 377 aa13.05□□□□□ -0.32
SF3A1-205ENST00000463818 VSIG2Q96IQ7 327 aa13.05□□□□□ -0.32
SF3A1-205ENST00000463818 RYR1P21817 5038 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms