RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 ZNF253O75346 499 aa16.52■□□□□ 0.24
SSNA1-203ENST00000463511 TPT1P13693 172 aaKnown RBP16.52■□□□□ 0.24
SSNA1-203ENST00000463511 NKX2-5P52952 324 aaPredicted RBP16.52■□□□□ 0.24
SSNA1-203ENST00000463511 PSG3Q16557 428 aa16.52■□□□□ 0.24
SSNA1-203ENST00000463511 AKR1C8PQ5T2L2 129 aa16.52■□□□□ 0.24
SSNA1-203ENST00000463511 SSX7Q7RTT5 188 aa16.52■□□□□ 0.24
SSNA1-203ENST00000463511 BLNKQ8WV28 456 aa16.52■□□□□ 0.24
SSNA1-203ENST00000463511 SMIM9A6NGZ8 99 aa16.51■□□□□ 0.23
SSNA1-203ENST00000463511 STAG3L2P0CL84 134 aa16.51■□□□□ 0.23
SSNA1-203ENST00000463511 STAG3L3P0CL85 134 aa16.51■□□□□ 0.23
SSNA1-203ENST00000463511 ZNF726P1Q15940 193 aa16.51■□□□□ 0.23
SSNA1-203ENST00000463511 SAV1Q9H4B6 383 aaPredicted RBP16.51■□□□□ 0.23
SSNA1-203ENST00000463511 F6UB75 175 aa16.5■□□□□ 0.23
SSNA1-203ENST00000463511 PDE6HQ13956 83 aa16.5■□□□□ 0.23
SSNA1-203ENST00000463511 PQLC2Q6ZP29 291 aa16.5■□□□□ 0.23
SSNA1-203ENST00000463511 FOXI2Q6ZQN5 318 aa16.5■□□□□ 0.23
SSNA1-203ENST00000463511 Q6ZR54 194 aa16.5■□□□□ 0.23
SSNA1-203ENST00000463511 DKK2Q9UBU2 259 aa16.5■□□□□ 0.23
SSNA1-203ENST00000463511 HTN3P15516 51 aa16.49■□□□□ 0.23
SSNA1-203ENST00000463511 UBE2L3P68036 154 aaKnown RBP16.49■□□□□ 0.23
SSNA1-203ENST00000463511 FAM222AQ5U5X8 452 aa16.49■□□□□ 0.23
SSNA1-203ENST00000463511 SLC51BQ86UW2 128 aa16.49■□□□□ 0.23
SSNA1-203ENST00000463511 ZNF738Q8NE65 137 aa16.49■□□□□ 0.23
SSNA1-203ENST00000463511 OR4B1Q8NGF8 309 aa16.49■□□□□ 0.23
SSNA1-203ENST00000463511 A0A0J9YX75 114 aa16.48■□□□□ 0.23
SSNA1-203ENST00000463511 ARL14EPLP0DKL9 152 aa16.48■□□□□ 0.23
SSNA1-203ENST00000463511 PSG9Q00887 426 aa16.48■□□□□ 0.23
SSNA1-203ENST00000463511 TMED6Q8WW62 240 aa16.48■□□□□ 0.23
SSNA1-203ENST00000463511 PHYHIPLQ96FC7 376 aa16.48■□□□□ 0.23
SSNA1-203ENST00000463511 FAM210BQ96KR6 192 aa16.48■□□□□ 0.23
SSNA1-203ENST00000463511 NIPSNAP3BQ9BS92 247 aa16.48■□□□□ 0.23
SSNA1-203ENST00000463511 SLC35B3Q9H1N7 401 aa16.48■□□□□ 0.23
SSNA1-203ENST00000463511 CTXND1A0A1B0GTU2 59 aa16.47■□□□□ 0.23
SSNA1-203ENST00000463511 PRB4P10163 310 aaPredicted RBP16.47■□□□□ 0.23
SSNA1-203ENST00000463511 EBLN2Q6P2I7 272 aa16.47■□□□□ 0.23
SSNA1-203ENST00000463511 EXOC3-AS1Q8N2X6 119 aa16.47■□□□□ 0.23
SSNA1-203ENST00000463511 RPUSD4Q96CM3 377 aaKnown RBP16.47■□□□□ 0.23
SSNA1-203ENST00000463511 TEX48A0A1B0GUV7 120 aa16.46■□□□□ 0.23
SSNA1-203ENST00000463511 UMAD1C9J7I0 102 aa16.46■□□□□ 0.23
SSNA1-203ENST00000463511 ZNF575Q86XF7 245 aa16.46■□□□□ 0.23
SSNA1-203ENST00000463511 PRAC2D3DTV9 90 aa16.45■□□□□ 0.22
SSNA1-203ENST00000463511 CXorf1O96002 111 aa16.45■□□□□ 0.22
SSNA1-203ENST00000463511 GCHFRP30047 84 aa16.45■□□□□ 0.22
SSNA1-203ENST00000463511 FHITP49789 147 aa16.45■□□□□ 0.22
SSNA1-203ENST00000463511 SUN5Q8TC36 379 aa16.45■□□□□ 0.22
SSNA1-203ENST00000463511 CLUHP3Q96NS8 147 aa16.45■□□□□ 0.22
SSNA1-203ENST00000463511 PRELID1Q9Y255 219 aa16.45■□□□□ 0.22
SSNA1-203ENST00000463511 BOLA1Q9Y3E2 137 aa16.45■□□□□ 0.22
SSNA1-203ENST00000463511 ABCA13Q86UQ4 5058 aa16.45■□□□□ 0.22
SSNA1-203ENST00000463511 LOC102723971A0A1B0GUV8 181 aa16.44■□□□□ 0.22
SSNA1-203ENST00000463511 A8MTW9 85 aa16.44■□□□□ 0.22
SSNA1-203ENST00000463511 M0R3E3 92 aa16.44■□□□□ 0.22
SSNA1-203ENST00000463511 RANP62826 216 aaKnown RBP16.44■□□□□ 0.22
SSNA1-203ENST00000463511 ICAM4Q14773 271 aa16.44■□□□□ 0.22
SSNA1-203ENST00000463511 LYPD1Q8N2G4 141 aa16.44■□□□□ 0.22
SSNA1-203ENST00000463511 OR8A1Q8NGG7 326 aa16.44■□□□□ 0.22
SSNA1-203ENST00000463511 MRPL53Q96EL3 112 aaKnown RBP16.44■□□□□ 0.22
SSNA1-203ENST00000463511 AAMDCQ9H7C9 122 aa16.44■□□□□ 0.22
SSNA1-203ENST00000463511 GOLT1BQ9Y3E0 138 aa16.44■□□□□ 0.22
SSNA1-203ENST00000463511 YTHDF2Q9Y5A9 579 aaKnown RBP16.44■□□□□ 0.22
SSNA1-203ENST00000463511 HBE1P02100 147 aa16.43■□□□□ 0.22
SSNA1-203ENST00000463511 RNF212Q495C1 297 aa16.43■□□□□ 0.22
SSNA1-203ENST00000463511 SOHLH1Q5JUK2 328 aa16.43■□□□□ 0.22
SSNA1-203ENST00000463511 EIF5AL1Q6IS14 154 aaKnown RBP16.43■□□□□ 0.22
SSNA1-203ENST00000463511 TMEM88Q6PEY1 159 aa16.43■□□□□ 0.22
SSNA1-203ENST00000463511 C1orf158Q8N1D5 194 aa16.43■□□□□ 0.22
SSNA1-203ENST00000463511 Q9H3A6 140 aa16.43■□□□□ 0.22
SSNA1-203ENST00000463511 DUSP14O95147 198 aaKnown RBP16.42■□□□□ 0.22
SSNA1-203ENST00000463511 CNN1P51911 297 aaKnown RBP16.42■□□□□ 0.22
SSNA1-203ENST00000463511 FGF8P55075 233 aaPredicted RBP16.42■□□□□ 0.22
SSNA1-203ENST00000463511 DPPA3Q6W0C5 159 aa16.42■□□□□ 0.22
SSNA1-203ENST00000463511 FAM213BQ8TBF2 198 aa16.42■□□□□ 0.22
SSNA1-203ENST00000463511 MAP1LC3B2A6NCE7 125 aa16.41■□□□□ 0.22
SSNA1-203ENST00000463511 HIST1H1AQ02539 215 aaPredicted RBP16.41■□□□□ 0.22
SSNA1-203ENST00000463511 C1orf134Q5TEV5 83 aa16.41■□□□□ 0.22
SSNA1-203ENST00000463511 MBD3L1Q8WWY6 194 aa16.41■□□□□ 0.22
SSNA1-203ENST00000463511 KRTAP4-5Q9BYR2 181 aa16.41■□□□□ 0.22
SSNA1-203ENST00000463511 MAP1LC3BQ9GZQ8 125 aa16.41■□□□□ 0.22
SSNA1-203ENST00000463511 TMPRSS5Q9H3S3 457 aa16.41■□□□□ 0.22
SSNA1-203ENST00000463511 TMEM167BQ9NRX6 74 aa16.41■□□□□ 0.22
SSNA1-203ENST00000463511 HSPG2P98160 4391 aa16.4■□□□□ 0.22
SSNA1-203ENST00000463511 SULT1A2P50226 295 aa16.4■□□□□ 0.22
SSNA1-203ENST00000463511 DAD1P61803 113 aa16.4■□□□□ 0.22
SSNA1-203ENST00000463511 RRN3P1Q2M238 152 aa16.4■□□□□ 0.22
SSNA1-203ENST00000463511 AMTNQ6UX39 209 aa16.4■□□□□ 0.22
SSNA1-203ENST00000463511 PGPA6NDG6 321 aa16.39■□□□□ 0.21
SSNA1-203ENST00000463511 BOLA2-SMG1P6H3BVE0 249 aa16.39■□□□□ 0.21
SSNA1-203ENST00000463511 OTORQ9NRC9 128 aa16.39■□□□□ 0.21
SSNA1-203ENST00000463511 RAB5CP51148 216 aa16.38■□□□□ 0.21
SSNA1-203ENST00000463511 IQCF2Q8IXL9 164 aa16.38■□□□□ 0.21
SSNA1-203ENST00000463511 OR10J6PQ8NGY7 276 aa16.37■□□□□ 0.21
SSNA1-203ENST00000463511 SFT2D1Q8WV19 159 aa16.37■□□□□ 0.21
SSNA1-203ENST00000463511 TMEM208Q9BTX3 173 aa16.37■□□□□ 0.21
SSNA1-203ENST00000463511 NPIPB6E9PJ23 425 aa16.36■□□□□ 0.21
SSNA1-203ENST00000463511 H2AFB1P0C5Y9 115 aa16.36■□□□□ 0.21
SSNA1-203ENST00000463511 ERCC8Q13216 396 aa16.35■□□□□ 0.21
SSNA1-203ENST00000463511 FAM74A1Q5RGS3 127 aa16.35■□□□□ 0.21
SSNA1-203ENST00000463511 IGF2BP2-AS1Q96M15 143 aa16.35■□□□□ 0.21
SSNA1-203ENST00000463511 IGKV2-40A0A087WW87 121 aaPredicted RBP16.34■□□□□ 0.21
SSNA1-203ENST00000463511 IGKV2D-40P01614 121 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms