RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 C12orf74Q32Q52 190 aa12.65□□□□□ -0.38
VPS52-214ENST00000463486 ACTR3CQ9C0K3 210 aaPredicted RBP12.65□□□□□ -0.38
VPS52-214ENST00000463486 OTORQ9NRC9 128 aa12.65□□□□□ -0.38
VPS52-214ENST00000463486 LOC102723971A0A1B0GUV8 181 aa12.64□□□□□ -0.39
VPS52-214ENST00000463486 KLLNB2CW77 178 aa12.64□□□□□ -0.39
VPS52-214ENST00000463486 BCL2L11O43521 198 aa12.64□□□□□ -0.39
VPS52-214ENST00000463486 CRISP2P16562 243 aa12.64□□□□□ -0.39
VPS52-214ENST00000463486 GCHFRP30047 84 aa12.64□□□□□ -0.39
VPS52-214ENST00000463486 RRN3P1Q2M238 152 aa12.64□□□□□ -0.39
VPS52-214ENST00000463486 TMEM256Q8N2U0 113 aa12.64□□□□□ -0.39
VPS52-214ENST00000463486 TMEM189A5PLL7 270 aa12.63□□□□□ -0.39
VPS52-214ENST00000463486 RBAKDNA6NC62 111 aa12.63□□□□□ -0.39
VPS52-214ENST00000463486 PGPA6NDG6 321 aa12.63□□□□□ -0.39
VPS52-214ENST00000463486 NUPR2A6NF83 97 aa12.63□□□□□ -0.39
VPS52-214ENST00000463486 DIRC3C9JPN6 131 aa12.63□□□□□ -0.39
VPS52-214ENST00000463486 LEPP41159 167 aa12.63□□□□□ -0.39
VPS52-214ENST00000463486 LGALSLQ3ZCW2 172 aaPredicted RBP12.63□□□□□ -0.39
VPS52-214ENST00000463486 Q6ZTC4 211 aa12.63□□□□□ -0.39
VPS52-214ENST00000463486 TMUB2Q71RG4 321 aa12.63□□□□□ -0.39
VPS52-214ENST00000463486 ZFAND2AQ8N6M9 145 aa12.63□□□□□ -0.39
VPS52-214ENST00000463486 C20orf144Q9BQM9 153 aa12.63□□□□□ -0.39
VPS52-214ENST00000463486 TMEM208Q9BTX3 173 aa12.63□□□□□ -0.39
VPS52-214ENST00000463486 ZNF492Q9P255 531 aa12.63□□□□□ -0.39
VPS52-214ENST00000463486 DKK2Q9UBU2 259 aa12.63□□□□□ -0.39
VPS52-214ENST00000463486 CTXND1A0A1B0GTU2 59 aa12.62□□□□□ -0.39
VPS52-214ENST00000463486 ZNF324O75467 553 aaPredicted RBP12.62□□□□□ -0.39
VPS52-214ENST00000463486 CXorf1O96002 111 aa12.62□□□□□ -0.39
VPS52-214ENST00000463486 SLC25A5P05141 298 aaKnown RBP12.62□□□□□ -0.39
VPS52-214ENST00000463486 NMBP08949 121 aa12.62□□□□□ -0.39
VPS52-214ENST00000463486 EMP1P54849 157 aa12.62□□□□□ -0.39
VPS52-214ENST00000463486 TAS2R60P59551 318 aa12.62□□□□□ -0.39
VPS52-214ENST00000463486 CD300CQ08708 224 aa12.62□□□□□ -0.39
VPS52-214ENST00000463486 PRR9Q5T870 116 aa12.62□□□□□ -0.39
VPS52-214ENST00000463486 ARL6IP6Q8N6S5 226 aa12.62□□□□□ -0.39
VPS52-214ENST00000463486 RXFP4Q8TDU9 374 aa12.62□□□□□ -0.39
VPS52-214ENST00000463486 LINC01587Q99440 93 aa12.62□□□□□ -0.39
VPS52-214ENST00000463486 YTHDF2Q9Y5A9 579 aaKnown RBP12.62□□□□□ -0.39
VPS52-214ENST00000463486 H7BYZ3 331 aa12.61□□□□□ -0.39
VPS52-214ENST00000463486 ZNF138P52744 262 aa12.61□□□□□ -0.39
VPS52-214ENST00000463486 FAM222AQ5U5X8 452 aa12.61□□□□□ -0.39
VPS52-214ENST00000463486 ZNF767PQ75MW2 155 aa12.61□□□□□ -0.39
VPS52-214ENST00000463486 hCG_2014768A0A024R1R8 64 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 TRAV12-3A0A0B4J271 114 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 TRBV7-9A0A0J9YWB2 115 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 LCE6AA0A183 80 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 A0A1B0GVG6 124 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 J3KRW8 73 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 C1QBP02746 253 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 SEC11BP0C7V7 166 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 SPART-AS1P0CW21 52 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 CSN1S1P47710 185 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 FHITP49789 147 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 TMEM78Q5T7P6 136 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 Q6ZQT7 251 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 Q8TAT8 98 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 HYLS1Q96M11 299 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 ZNF471Q9BX82 626 aaPredicted RBP12.6□□□□□ -0.39
VPS52-214ENST00000463486 TMPRSS5Q9H3S3 457 aa12.6□□□□□ -0.39
VPS52-214ENST00000463486 GGTLC3B5MD39 225 aa12.59□□□□□ -0.39
VPS52-214ENST00000463486 BTN1A1Q13410 526 aa12.59□□□□□ -0.39
VPS52-214ENST00000463486 AKR1C8PQ5T2L2 129 aa12.59□□□□□ -0.39
VPS52-214ENST00000463486 RNASE8Q8TDE3 154 aaKnown RBP12.59□□□□□ -0.39
VPS52-214ENST00000463486 TMEM167BQ9NRX6 74 aa12.59□□□□□ -0.39
VPS52-214ENST00000463486 KANTRA0A1W2PQU2 76 aa12.58□□□□□ -0.4
VPS52-214ENST00000463486 C7orf71A4D174 169 aa12.58□□□□□ -0.4
VPS52-214ENST00000463486 C11orf94C9JXX5 98 aa12.58□□□□□ -0.4
VPS52-214ENST00000463486 GNG5P63218 68 aa12.58□□□□□ -0.4
VPS52-214ENST00000463486 STOML3Q8TAV4 291 aa12.58□□□□□ -0.4
VPS52-214ENST00000463486 TMED6Q8WW62 240 aa12.58□□□□□ -0.4
VPS52-214ENST00000463486 LINC00467Q9BRT7 94 aa12.58□□□□□ -0.4
VPS52-214ENST00000463486 KMT2AQ03164 3969 aa12.57□□□□□ -0.4
VPS52-214ENST00000463486 RNASE4P34096 147 aaKnown RBP12.57□□□□□ -0.4
VPS52-214ENST00000463486 FGF8P55075 233 aaPredicted RBP12.57□□□□□ -0.4
VPS52-214ENST00000463486 FAM74A1Q5RGS3 127 aa12.57□□□□□ -0.4
VPS52-214ENST00000463486 ZNF493Q6ZR52 646 aa12.57□□□□□ -0.4
VPS52-214ENST00000463486 GOLT1AQ6ZVE7 132 aa12.57□□□□□ -0.4
VPS52-214ENST00000463486 TVP23CQ96ET8 276 aa12.57□□□□□ -0.4
VPS52-214ENST00000463486 KLK5Q9Y337 293 aaPredicted RBP12.57□□□□□ -0.4
VPS52-214ENST00000463486 LENEPQ9Y5L5 61 aa12.57□□□□□ -0.4
VPS52-214ENST00000463486 TRAV8-1A0A0A6YYK1 113 aa12.56□□□□□ -0.4
VPS52-214ENST00000463486 TRAV10A0A0B4J240 114 aa12.56□□□□□ -0.4
VPS52-214ENST00000463486 A0A1W2PRE2 83 aa12.56□□□□□ -0.4
VPS52-214ENST00000463486 TCRAP04437 139 aa12.56□□□□□ -0.4
VPS52-214ENST00000463486 GPX1P07203 203 aa12.56□□□□□ -0.4
VPS52-214ENST00000463486 HTN1P15515 57 aa12.56□□□□□ -0.4
VPS52-214ENST00000463486 SUMO1P63165 101 aaKnown RBP12.56□□□□□ -0.4
VPS52-214ENST00000463486 AKAP14Q86UN6 197 aa12.56□□□□□ -0.4
VPS52-214ENST00000463486 C5orf17Q8NAS9 161 aa12.56□□□□□ -0.4
VPS52-214ENST00000463486 CMTM2Q8TAZ6 248 aa12.56□□□□□ -0.4
VPS52-214ENST00000463486 TMEM263Q8WUH6 116 aaKnown RBP12.56□□□□□ -0.4
VPS52-214ENST00000463486 MBD3L1Q8WWY6 194 aa12.56□□□□□ -0.4
VPS52-214ENST00000463486 PYGO2Q9BRQ0 406 aa12.56□□□□□ -0.4
VPS52-214ENST00000463486 NIPSNAP3BQ9BS92 247 aa12.56□□□□□ -0.4
VPS52-214ENST00000463486 MAP1LC3B2A6NCE7 125 aa12.55□□□□□ -0.4
VPS52-214ENST00000463486 LYRM9A8MSI8 78 aa12.55□□□□□ -0.4
VPS52-214ENST00000463486 UMAD1C9J7I0 102 aa12.55□□□□□ -0.4
VPS52-214ENST00000463486 PFDN1O60925 122 aa12.55□□□□□ -0.4
VPS52-214ENST00000463486 IGLV2-11P01706 119 aa12.55□□□□□ -0.4
VPS52-214ENST00000463486 C2CD4CQ8TF44 421 aa12.55□□□□□ -0.4
VPS52-214ENST00000463486 C16orf74Q96GX8 76 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms