RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 FAM122CQ6P4D5 195 aa9.29□□□□□ -0.92
HDAC1-203ENST00000463172 C9orf47Q6ZRZ4 202 aa9.29□□□□□ -0.92
HDAC1-203ENST00000463172 EXOC3-AS1Q8N2X6 119 aa9.29□□□□□ -0.92
HDAC1-203ENST00000463172 ZNF680Q8NEM1 530 aa9.29□□□□□ -0.92
HDAC1-203ENST00000463172 RNASE8Q8TDE3 154 aaKnown RBP9.29□□□□□ -0.92
HDAC1-203ENST00000463172 NOP10Q9NPE3 64 aaKnown RBP9.29□□□□□ -0.92
HDAC1-203ENST00000463172 PLA2G2EQ9NZK7 142 aa9.29□□□□□ -0.92
HDAC1-203ENST00000463172 PRM2P04554 102 aa9.28□□□□□ -0.92
HDAC1-203ENST00000463172 GPX1P07203 203 aa9.28□□□□□ -0.92
HDAC1-203ENST00000463172 ERCC8Q13216 396 aa9.28□□□□□ -0.92
HDAC1-203ENST00000463172 RNF212Q495C1 297 aa9.28□□□□□ -0.92
HDAC1-203ENST00000463172 TMEM88Q6PEY1 159 aa9.28□□□□□ -0.92
HDAC1-203ENST00000463172 RXFP4Q8TDU9 374 aa9.28□□□□□ -0.92
HDAC1-203ENST00000463172 FXYD5Q96DB9 178 aa9.28□□□□□ -0.92
HDAC1-203ENST00000463172 ATG101Q9BSB4 218 aa9.28□□□□□ -0.92
HDAC1-203ENST00000463172 VPS13DQ5THJ4 4388 aa9.27□□□□□ -0.93
HDAC1-203ENST00000463172 TRBV7-9A0A0J9YWB2 115 aa9.27□□□□□ -0.93
HDAC1-203ENST00000463172 PLAC8L1A1L4L8 177 aa9.27□□□□□ -0.93
HDAC1-203ENST00000463172 RBAKDNA6NC62 111 aa9.27□□□□□ -0.93
HDAC1-203ENST00000463172 M6PRP20645 277 aa9.27□□□□□ -0.93
HDAC1-203ENST00000463172 FAM3BP58499 235 aaPredicted RBP9.27□□□□□ -0.93
HDAC1-203ENST00000463172 PQLC2Q6ZP29 291 aa9.27□□□□□ -0.93
HDAC1-203ENST00000463172 INO80EQ8NBZ0 244 aaPredicted RBP9.27□□□□□ -0.93
HDAC1-203ENST00000463172 CMTM2Q8TAZ6 248 aa9.27□□□□□ -0.93
HDAC1-203ENST00000463172 AGPAT4-IT1Q9H0P7 198 aa9.27□□□□□ -0.93
HDAC1-203ENST00000463172 KLLNB2CW77 178 aa9.26□□□□□ -0.93
HDAC1-203ENST00000463172 RGS13O14921 159 aa9.26□□□□□ -0.93
HDAC1-203ENST00000463172 MBP02144 154 aa9.26□□□□□ -0.93
HDAC1-203ENST00000463172 GIPP09681 153 aaPredicted RBP9.26□□□□□ -0.93
HDAC1-203ENST00000463172 CRISP2P16562 243 aa9.26□□□□□ -0.93
HDAC1-203ENST00000463172 RNASE4P34096 147 aaKnown RBP9.26□□□□□ -0.93
HDAC1-203ENST00000463172 ZNF138P52744 262 aa9.26□□□□□ -0.93
HDAC1-203ENST00000463172 RANP62826 216 aaKnown RBP9.26□□□□□ -0.93
HDAC1-203ENST00000463172 FCN2Q15485 313 aa9.26□□□□□ -0.93
HDAC1-203ENST00000463172 EIF4E3Q8N5X7 224 aaKnown RBP9.26□□□□□ -0.93
HDAC1-203ENST00000463172 PHYHIPLQ96FC7 376 aa9.26□□□□□ -0.93
HDAC1-203ENST00000463172 Q9H3A6 140 aa9.26□□□□□ -0.93
HDAC1-203ENST00000463172 DNAH6Q9C0G6 4158 aa9.26□□□□□ -0.93
HDAC1-203ENST00000463172 IGKV2-40A0A087WW87 121 aaPredicted RBP9.25□□□□□ -0.93
HDAC1-203ENST00000463172 IGKV2D-40P01614 121 aaPredicted RBP9.25□□□□□ -0.93
HDAC1-203ENST00000463172 DAZ2Q13117 558 aaKnown RBP9.25□□□□□ -0.93
HDAC1-203ENST00000463172 KIR3DS1Q14943 382 aa9.25□□□□□ -0.93
HDAC1-203ENST00000463172 RGS21Q2M5E4 152 aa9.25□□□□□ -0.93
HDAC1-203ENST00000463172 LINC00336Q6ZUF6 198 aa9.25□□□□□ -0.93
HDAC1-203ENST00000463172 OR10G4Q8NGN3 311 aa9.25□□□□□ -0.93
HDAC1-203ENST00000463172 OR10G9Q8NGN4 311 aa9.25□□□□□ -0.93
HDAC1-203ENST00000463172 OR10G7Q8NGN6 311 aa9.25□□□□□ -0.93
HDAC1-203ENST00000463172 FAM19A4Q96LR4 140 aa9.25□□□□□ -0.93
HDAC1-203ENST00000463172 AQP10Q96PS8 301 aa9.25□□□□□ -0.93
HDAC1-203ENST00000463172 ARPC5LQ9BPX5 153 aa9.25□□□□□ -0.93
HDAC1-203ENST00000463172 LINC00467Q9BRT7 94 aa9.25□□□□□ -0.93
HDAC1-203ENST00000463172 ZNF492Q9P255 531 aa9.25□□□□□ -0.93
HDAC1-203ENST00000463172 NUDT3O95989 172 aa9.24□□□□□ -0.93
HDAC1-203ENST00000463172 BTN1A1Q13410 526 aa9.24□□□□□ -0.93
HDAC1-203ENST00000463172 ANXA2RQ3ZCQ2 193 aa9.24□□□□□ -0.93
HDAC1-203ENST00000463172 SOHLH1Q5JUK2 328 aa9.24□□□□□ -0.93
HDAC1-203ENST00000463172 VGLL1Q99990 258 aa9.24□□□□□ -0.93
HDAC1-203ENST00000463172 PSMG3Q9BT73 122 aaPredicted RBP9.24□□□□□ -0.93
HDAC1-203ENST00000463172 WFDC1Q9HC57 220 aa9.24□□□□□ -0.93
HDAC1-203ENST00000463172 OTORQ9NRC9 128 aa9.24□□□□□ -0.93
HDAC1-203ENST00000463172 LENEPQ9Y5L5 61 aa9.24□□□□□ -0.93
HDAC1-203ENST00000463172 BORCS7-ASMTA0A0B4J1R7 106 aa9.23□□□□□ -0.93
HDAC1-203ENST00000463172 GAGE12BA1L429 117 aa9.23□□□□□ -0.93
HDAC1-203ENST00000463172 GAGE7O76087 117 aa9.23□□□□□ -0.93
HDAC1-203ENST00000463172 GAGE12FP0CL80 117 aa9.23□□□□□ -0.93
HDAC1-203ENST00000463172 GAGE12GP0CL81 117 aa9.23□□□□□ -0.93
HDAC1-203ENST00000463172 GAGE12IP0CL82 117 aa9.23□□□□□ -0.93
HDAC1-203ENST00000463172 CDC34P49427 236 aaPredicted RBP9.23□□□□□ -0.93
HDAC1-203ENST00000463172 CCL18P55774 89 aa9.23□□□□□ -0.93
HDAC1-203ENST00000463172 SERF2P84101 59 aa9.23□□□□□ -0.93
HDAC1-203ENST00000463172 OR5I1Q13606 314 aa9.23□□□□□ -0.93
HDAC1-203ENST00000463172 LGALS9BQ3B8N2 356 aa9.23□□□□□ -0.93
HDAC1-203ENST00000463172 ARL6IP6Q8N6S5 226 aa9.23□□□□□ -0.93
HDAC1-203ENST00000463172 HSD17B11Q8NBQ5 300 aa9.23□□□□□ -0.93
HDAC1-203ENST00000463172 OR2G3Q8NGZ4 309 aa9.23□□□□□ -0.93
HDAC1-203ENST00000463172 TMED6Q8WW62 240 aa9.23□□□□□ -0.93
HDAC1-203ENST00000463172 TRGV2A0A075B6R0 118 aa9.22□□□□□ -0.93
HDAC1-203ENST00000463172 IGHV1OR15-1A0A075B7D0 117 aa9.22□□□□□ -0.93
HDAC1-203ENST00000463172 DIRC3C9JPN6 131 aa9.22□□□□□ -0.93
HDAC1-203ENST00000463172 ZNF324O75467 553 aaPredicted RBP9.22□□□□□ -0.93
HDAC1-203ENST00000463172 RAB2AP61019 212 aa9.22□□□□□ -0.93
HDAC1-203ENST00000463172 CD300CQ08708 224 aa9.22□□□□□ -0.93
HDAC1-203ENST00000463172 IBA57Q5T440 356 aaKnown RBP9.22□□□□□ -0.93
HDAC1-203ENST00000463172 LINC00612Q8N6U2 182 aa9.22□□□□□ -0.93
HDAC1-203ENST00000463172 GNPNAT1Q96EK6 184 aaPredicted RBP9.22□□□□□ -0.93
HDAC1-203ENST00000463172 ZNF503Q96F45 646 aa9.22□□□□□ -0.93
HDAC1-203ENST00000463172 HYLS1Q96M11 299 aa9.22□□□□□ -0.93
HDAC1-203ENST00000463172 FXYD6-FXYD2A0A087WZ82 144 aa9.21□□□□□ -0.94
HDAC1-203ENST00000463172 SERTM2A0A1B0GWG4 89 aa9.21□□□□□ -0.94
HDAC1-203ENST00000463172 PGPA6NDG6 321 aa9.21□□□□□ -0.94
HDAC1-203ENST00000463172 K7EQM0 130 aa9.21□□□□□ -0.94
HDAC1-203ENST00000463172 ZFAND2AQ8N6M9 145 aa9.21□□□□□ -0.94
HDAC1-203ENST00000463172 GSN-AS1Q9NRJ2 163 aa9.21□□□□□ -0.94
HDAC1-203ENST00000463172 DNAH10Q8IVF4 4471 aa9.21□□□□□ -0.94
HDAC1-203ENST00000463172 FRAS1Q86XX4 4008 aa9.21□□□□□ -0.94
HDAC1-203ENST00000463172 TRGV1A0A0A0MS02 117 aa9.2□□□□□ -0.94
HDAC1-203ENST00000463172 H3BNG1 76 aa9.2□□□□□ -0.94
HDAC1-203ENST00000463172 M0R2N4 97 aa9.2□□□□□ -0.94
HDAC1-203ENST00000463172 TCL1AP56279 114 aa9.2□□□□□ -0.94
HDAC1-203ENST00000463172 ZNF415Q09FC8 603 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms