RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 MRPL16Q9NX20 251 aaKnown RBP5.05□□□□□ -1.6
SMC3-202ENST00000462899 TP53TG3Q9ULZ0 132 aa5.05□□□□□ -1.6
SMC3-202ENST00000462899 DUXBA0A1W2PPF3 345 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 E5RGE8 158 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 H3BQ15 152 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 RS1O15537 224 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 ORM1P02763 201 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 IL5P05113 134 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 SNRPCP09234 159 aaKnown RBP5.04□□□□□ -1.6
SMC3-202ENST00000462899 OR5G3P0C626 314 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 GYPEP15421 78 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 CRISP2P16562 243 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 NCS1P62166 190 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 SELENOTP62341 195 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 LAGE3Q14657 143 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 LINC01620Q4KN68 170 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 PRR9Q5T870 116 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 Q6ZQT7 251 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 OR10G4Q8NGN3 311 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 LRRC20Q8TCA0 184 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 ZNF479Q96JC4 524 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 CIB3Q96Q77 187 aaPredicted RBP5.04□□□□□ -1.6
SMC3-202ENST00000462899 EXTL2Q9UBQ6 330 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 PXMP4Q9Y6I8 212 aa5.04□□□□□ -1.6
SMC3-202ENST00000462899 DISC1C4P0D8 188 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 H3BTX0 84 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 SYNGR2O43760 224 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 IGLV2-11P01706 119 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 SFTA3P0C7M3 94 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 SRPXP78539 464 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 LINC00305Q7Z4B0 112 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 BPIFA4PQ86YQ2 179 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 ZFAND2AQ8N6M9 145 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 OR51S1Q8NGJ8 323 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 BLNKQ8WV28 456 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 SMIM4Q8WVI0 70 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 TMEM37Q8WXS4 190 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 MRPL53Q96EL3 112 aaKnown RBP5.03□□□□□ -1.6
SMC3-202ENST00000462899 PRRT1Q99946 306 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 TXNDC17Q9BRA2 123 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 ARL6Q9H0F7 186 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 Q9HAA7 133 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 KCNIP3Q9Y2W7 256 aa5.03□□□□□ -1.6
SMC3-202ENST00000462899 FAT4Q6V0I7 4981 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 LOC100131303A0A0U1RQF7 123 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 FAM25AB3EWG3 89 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 FAM25CB3EWG5 89 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 FAM25GB3EWG6 89 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 FNDC10F2Z333 226 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 H3BP45 60 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 WRBO00258 174 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 ZNF253O75346 499 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 MPDU1O75352 247 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 MED6O75586 246 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 CCNKO75909 580 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 OR4E1P0C645 316 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 AKAIN1P0CW23 69 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 PTTG1IPP53801 180 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 RPP30P78346 268 aaKnown RBP5.02□□□□□ -1.61
SMC3-202ENST00000462899 ERCC8Q13216 396 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 ZNF846Q147U1 533 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 OPCMLQ14982 345 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 TDRG1Q3Y452 100 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 SPANXN5Q5MJ07 72 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 PXDC1Q5TGL8 231 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 C15orf40Q8WUR7 153 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 RASL10AQ92737 203 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 MIXL1Q9H2W2 232 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 PAIP2BQ9ULR5 123 aaKnown RBP5.02□□□□□ -1.61
SMC3-202ENST00000462899 RNF24Q9Y225 148 aa5.02□□□□□ -1.61
SMC3-202ENST00000462899 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.01□□□□□ -1.61
SMC3-202ENST00000462899 IGHV1OR15-1A0A075B7D0 117 aa5.01□□□□□ -1.61
SMC3-202ENST00000462899 TRGV4A0A0C4DH28 118 aa5.01□□□□□ -1.61
SMC3-202ENST00000462899 C9JCJ5 164 aa5.01□□□□□ -1.61
SMC3-202ENST00000462899 M0R3E3 92 aa5.01□□□□□ -1.61
SMC3-202ENST00000462899 NMBP08949 121 aa5.01□□□□□ -1.61
SMC3-202ENST00000462899 ANXA7P20073 488 aaKnown RBP5.01□□□□□ -1.61
SMC3-202ENST00000462899 VBP1P61758 197 aa5.01□□□□□ -1.61
SMC3-202ENST00000462899 MRPS10P82664 201 aaKnown RBP5.01□□□□□ -1.61
SMC3-202ENST00000462899 SLC38A11Q08AI6 406 aa5.01□□□□□ -1.61
SMC3-202ENST00000462899 TMEM14EPQ6UXP3 125 aa5.01□□□□□ -1.61
SMC3-202ENST00000462899 S100A7AQ86SG5 101 aa5.01□□□□□ -1.61
SMC3-202ENST00000462899 OR10P1Q8NGE3 313 aa5.01□□□□□ -1.61
SMC3-202ENST00000462899 PCNPQ8WW12 178 aaKnown RBP5.01□□□□□ -1.61
SMC3-202ENST00000462899 AGPAT4-IT1Q9H0P7 198 aa5.01□□□□□ -1.61
SMC3-202ENST00000462899 STRAPQ9Y3F4 350 aaKnown RBP5.01□□□□□ -1.61
SMC3-202ENST00000462899 TRAV4A0A0B4J268 109 aa5□□□□□ -1.61
SMC3-202ENST00000462899 ANKRD20A5PA0PJZ0 165 aa5□□□□□ -1.61
SMC3-202ENST00000462899 SMCO3A2RU48 225 aa5□□□□□ -1.61
SMC3-202ENST00000462899 LECT2O14960 151 aa5□□□□□ -1.61
SMC3-202ENST00000462899 CTDSPLO15194 276 aa5□□□□□ -1.61
SMC3-202ENST00000462899 NDUFB4O95168 129 aa5□□□□□ -1.61
SMC3-202ENST00000462899 ANXA3P12429 323 aa5□□□□□ -1.61
SMC3-202ENST00000462899 RNASE4P34096 147 aaKnown RBP5□□□□□ -1.61
SMC3-202ENST00000462899 ASIPP42127 132 aa5□□□□□ -1.61
SMC3-202ENST00000462899 RPL37AP61513 92 aaKnown RBP5□□□□□ -1.61
SMC3-202ENST00000462899 GUK1Q16774 197 aa5□□□□□ -1.61
SMC3-202ENST00000462899 ACOT6Q3I5F7 207 aaPredicted RBP5□□□□□ -1.61
SMC3-202ENST00000462899 MZT2AQ6P582 158 aa5□□□□□ -1.61
SMC3-202ENST00000462899 C9orf47Q6ZRZ4 202 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms