RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 C5orf51A6NDU8 294 aa11.08□□□□□ -0.64
COL7A1-204ENST00000462475 KLLNB2CW77 178 aa11.08□□□□□ -0.64
COL7A1-204ENST00000462475 NDUFB4O95168 129 aa11.08□□□□□ -0.64
COL7A1-204ENST00000462475 BTF3P20290 206 aaKnown RBP11.08□□□□□ -0.64
COL7A1-204ENST00000462475 RPL29P47914 159 aaKnown RBP11.08□□□□□ -0.64
COL7A1-204ENST00000462475 BAXQ07812 192 aa11.08□□□□□ -0.64
COL7A1-204ENST00000462475 CD300CQ08708 224 aa11.08□□□□□ -0.64
COL7A1-204ENST00000462475 ASAH1Q13510 395 aa11.08□□□□□ -0.64
COL7A1-204ENST00000462475 ZNF680Q8NEM1 530 aa11.08□□□□□ -0.64
COL7A1-204ENST00000462475 FAM19A4Q96LR4 140 aa11.08□□□□□ -0.64
COL7A1-204ENST00000462475 TRAV6A0A075B6T7 132 aa11.07□□□□□ -0.64
COL7A1-204ENST00000462475 TRGV1A0A0A0MS02 117 aa11.07□□□□□ -0.64
COL7A1-204ENST00000462475 IGSF23A1L1A6 192 aa11.07□□□□□ -0.64
COL7A1-204ENST00000462475 LYRM1O43325 122 aa11.07□□□□□ -0.64
COL7A1-204ENST00000462475 PYYP10082 97 aa11.07□□□□□ -0.64
COL7A1-204ENST00000462475 LINC00315P59091 139 aa11.07□□□□□ -0.64
COL7A1-204ENST00000462475 C18orf15Q96N68 181 aa11.07□□□□□ -0.64
COL7A1-204ENST00000462475 SCRT2Q9NQ03 307 aa11.07□□□□□ -0.64
COL7A1-204ENST00000462475 LYRM2Q9NU23 88 aaPredicted RBP11.07□□□□□ -0.64
COL7A1-204ENST00000462475 ZNF324O75467 553 aaPredicted RBP11.06□□□□□ -0.64
COL7A1-204ENST00000462475 TCRBP04435 133 aa11.06□□□□□ -0.64
COL7A1-204ENST00000462475 FGF7P21781 194 aa11.06□□□□□ -0.64
COL7A1-204ENST00000462475 SULT1A1P50225 295 aa11.06□□□□□ -0.64
COL7A1-204ENST00000462475 S100A10P60903 97 aa11.06□□□□□ -0.64
COL7A1-204ENST00000462475 MZT2BQ6NZ67 158 aa11.06□□□□□ -0.64
COL7A1-204ENST00000462475 Q6ZRN7 208 aaPredicted RBP11.06□□□□□ -0.64
COL7A1-204ENST00000462475 EXOC3-AS1Q8N2X6 119 aa11.06□□□□□ -0.64
COL7A1-204ENST00000462475 TMEM252Q8N6L7 170 aa11.06□□□□□ -0.64
COL7A1-204ENST00000462475 C2orf50Q96LR7 162 aa11.06□□□□□ -0.64
COL7A1-204ENST00000462475 LINC00467Q9BRT7 94 aa11.06□□□□□ -0.64
COL7A1-204ENST00000462475 AGPAT4-IT1Q9H0P7 198 aa11.06□□□□□ -0.64
COL7A1-204ENST00000462475 NUDT15Q9NV35 164 aa11.06□□□□□ -0.64
COL7A1-204ENST00000462475 TMEM14CQ9P0S9 112 aa11.06□□□□□ -0.64
COL7A1-204ENST00000462475 FUT9Q9Y231 359 aa11.06□□□□□ -0.64
COL7A1-204ENST00000462475 KLF12Q9Y4X4 402 aa11.06□□□□□ -0.64
COL7A1-204ENST00000462475 HIST1H1EP10412 219 aaKnown RBP11.05□□□□□ -0.64
COL7A1-204ENST00000462475 PVALBP20472 110 aaPredicted RBP11.05□□□□□ -0.64
COL7A1-204ENST00000462475 RNASE4P34096 147 aaKnown RBP11.05□□□□□ -0.64
COL7A1-204ENST00000462475 ANXA2RQ3ZCQ2 193 aa11.05□□□□□ -0.64
COL7A1-204ENST00000462475 GCSAMLQ5JQS6 135 aa11.05□□□□□ -0.64
COL7A1-204ENST00000462475 PRR9Q5T870 116 aa11.05□□□□□ -0.64
COL7A1-204ENST00000462475 C12orf45Q8N5I9 185 aaPredicted RBP11.05□□□□□ -0.64
COL7A1-204ENST00000462475 EIF4E3Q8N5X7 224 aaKnown RBP11.05□□□□□ -0.64
COL7A1-204ENST00000462475 BLNKQ8WV28 456 aa11.05□□□□□ -0.64
COL7A1-204ENST00000462475 PRELID1Q9Y255 219 aa11.05□□□□□ -0.64
COL7A1-204ENST00000462475 TIMM9Q9Y5J7 89 aa11.05□□□□□ -0.64
COL7A1-204ENST00000462475 HERC1Q15751 4861 aa11.05□□□□□ -0.64
COL7A1-204ENST00000462475 IGKV2-40A0A087WW87 121 aaPredicted RBP11.04□□□□□ -0.64
COL7A1-204ENST00000462475 SPINK4O60575 86 aa11.04□□□□□ -0.64
COL7A1-204ENST00000462475 IGKV2D-40P01614 121 aaPredicted RBP11.04□□□□□ -0.64
COL7A1-204ENST00000462475 S100A11P31949 105 aa11.04□□□□□ -0.64
COL7A1-204ENST00000462475 TCL1AP56279 114 aa11.04□□□□□ -0.64
COL7A1-204ENST00000462475 IL15RAQ13261 267 aa11.04□□□□□ -0.64
COL7A1-204ENST00000462475 RAB32Q13637 225 aa11.04□□□□□ -0.64
COL7A1-204ENST00000462475 PDE6HQ13956 83 aa11.04□□□□□ -0.64
COL7A1-204ENST00000462475 Q6ZQT7 251 aa11.04□□□□□ -0.64
COL7A1-204ENST00000462475 STX12Q86Y82 276 aa11.04□□□□□ -0.64
COL7A1-204ENST00000462475 CHAC2Q8WUX2 184 aa11.04□□□□□ -0.64
COL7A1-204ENST00000462475 LINC00477Q96M19 166 aa11.04□□□□□ -0.64
COL7A1-204ENST00000462475 TP53TG3Q9ULZ0 132 aa11.04□□□□□ -0.64
COL7A1-204ENST00000462475 IGHV3-53P01767 116 aa11.03□□□□□ -0.64
COL7A1-204ENST00000462475 CRISP2P16562 243 aa11.03□□□□□ -0.64
COL7A1-204ENST00000462475 HBG1P69891 147 aa11.03□□□□□ -0.64
COL7A1-204ENST00000462475 HBG2P69892 147 aa11.03□□□□□ -0.64
COL7A1-204ENST00000462475 ZFAND2AQ8N6M9 145 aa11.03□□□□□ -0.64
COL7A1-204ENST00000462475 SLC25A2Q9BXI2 301 aa11.03□□□□□ -0.64
COL7A1-204ENST00000462475 MRPL16Q9NX20 251 aaKnown RBP11.03□□□□□ -0.64
COL7A1-204ENST00000462475 FAT1Q14517 4588 aa11.02□□□□□ -0.64
COL7A1-204ENST00000462475 hCG_2014768A0A024R1R8 64 aa11.02□□□□□ -0.65
COL7A1-204ENST00000462475 SIVA1O15304 175 aa11.02□□□□□ -0.65
COL7A1-204ENST00000462475 MPDU1O75352 247 aa11.02□□□□□ -0.65
COL7A1-204ENST00000462475 NXPH4O95158 308 aa11.02□□□□□ -0.65
COL7A1-204ENST00000462475 GPX1P07203 203 aa11.02□□□□□ -0.65
COL7A1-204ENST00000462475 FUSP35637 526 aaKnown RBP eCLIP11.02□□□□□ -0.65
COL7A1-204ENST00000462475 ICAM4Q14773 271 aa11.02□□□□□ -0.65
COL7A1-204ENST00000462475 IBA57Q5T440 356 aaKnown RBP11.02□□□□□ -0.65
COL7A1-204ENST00000462475 FAM122CQ6P4D5 195 aa11.02□□□□□ -0.65
COL7A1-204ENST00000462475 C9orf47Q6ZRZ4 202 aa11.02□□□□□ -0.65
COL7A1-204ENST00000462475 ENKURQ8TC29 256 aa11.02□□□□□ -0.65
COL7A1-204ENST00000462475 ST6GAL2Q96JF0 529 aa11.02□□□□□ -0.65
COL7A1-204ENST00000462475 VGLL1Q99990 258 aa11.02□□□□□ -0.65
COL7A1-204ENST00000462475 NPCDR1Q9BY65 106 aa11.02□□□□□ -0.65
COL7A1-204ENST00000462475 GPN1Q9HCN4 374 aaPredicted RBP11.02□□□□□ -0.65
COL7A1-204ENST00000462475 RGS13O14921 159 aa11.01□□□□□ -0.65
COL7A1-204ENST00000462475 PAX4O43316 350 aa11.01□□□□□ -0.65
COL7A1-204ENST00000462475 MIR17HGQ75NE6 70 aa11.01□□□□□ -0.65
COL7A1-204ENST00000462475 FAM167A-AS1Q96KT0 104 aa11.01□□□□□ -0.65
COL7A1-204ENST00000462475 AAMDCQ9H7C9 122 aa11.01□□□□□ -0.65
COL7A1-204ENST00000462475 ICOSQ9Y6W8 199 aa11.01□□□□□ -0.65
COL7A1-204ENST00000462475 IGHV1OR15-1A0A075B7D0 117 aa11□□□□□ -0.65
COL7A1-204ENST00000462475 FAM240BA0A1B0GVZ2 78 aa11□□□□□ -0.65
COL7A1-204ENST00000462475 NMBP08949 121 aa11□□□□□ -0.65
COL7A1-204ENST00000462475 H2AFB2P0C5Z0 115 aa11□□□□□ -0.65
COL7A1-204ENST00000462475 ATP6V1FQ16864 119 aa11□□□□□ -0.65
COL7A1-204ENST00000462475 TMEM78Q5T7P6 136 aa11□□□□□ -0.65
COL7A1-204ENST00000462475 Q8TAT8 98 aa11□□□□□ -0.65
COL7A1-204ENST00000462475 THAP6Q8TBB0 222 aa11□□□□□ -0.65
COL7A1-204ENST00000462475 C8orf49Q96NF6 230 aa10.99□□□□□ -0.65
COL7A1-204ENST00000462475 ARPC5LQ9BPX5 153 aa10.99□□□□□ -0.65
COL7A1-204ENST00000462475 ZNF492Q9P255 531 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms