RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 TMEM78Q5T7P6 136 aa13.4□□□□□ -0.26
SLC6A1-204ENST00000462473 C9orf47Q6ZRZ4 202 aa13.4□□□□□ -0.26
SLC6A1-204ENST00000462473 LYPD1Q8N2G4 141 aa13.4□□□□□ -0.26
SLC6A1-204ENST00000462473 HSD17B11Q8NBQ5 300 aa13.4□□□□□ -0.26
SLC6A1-204ENST00000462473 INO80EQ8NBZ0 244 aaPredicted RBP13.4□□□□□ -0.26
SLC6A1-204ENST00000462473 FAM210BQ96KR6 192 aa13.4□□□□□ -0.26
SLC6A1-204ENST00000462473 TIMM8BQ9Y5J9 83 aaPredicted RBP13.4□□□□□ -0.26
SLC6A1-204ENST00000462473 RAB2AP61019 212 aa13.39□□□□□ -0.27
SLC6A1-204ENST00000462473 OR10G4Q8NGN3 311 aa13.39□□□□□ -0.27
SLC6A1-204ENST00000462473 OR10G9Q8NGN4 311 aa13.39□□□□□ -0.27
SLC6A1-204ENST00000462473 OR10G7Q8NGN6 311 aa13.39□□□□□ -0.27
SLC6A1-204ENST00000462473 RNASE8Q8TDE3 154 aaKnown RBP13.39□□□□□ -0.27
SLC6A1-204ENST00000462473 VGLL1Q99990 258 aa13.39□□□□□ -0.27
SLC6A1-204ENST00000462473 Q9H3A6 140 aa13.39□□□□□ -0.27
SLC6A1-204ENST00000462473 FXYD6-FXYD2A0A087WZ82 144 aa13.38□□□□□ -0.27
SLC6A1-204ENST00000462473 C7orf71A4D174 169 aa13.38□□□□□ -0.27
SLC6A1-204ENST00000462473 OR2T35Q8NGX2 323 aa13.38□□□□□ -0.27
SLC6A1-204ENST00000462473 FAM19A4Q96LR4 140 aa13.38□□□□□ -0.27
SLC6A1-204ENST00000462473 PYGO2Q9BRQ0 406 aa13.38□□□□□ -0.27
SLC6A1-204ENST00000462473 NOP10Q9NPE3 64 aaKnown RBP13.38□□□□□ -0.27
SLC6A1-204ENST00000462473 KLLNB2CW77 178 aa13.37□□□□□ -0.27
SLC6A1-204ENST00000462473 GPX1P07203 203 aa13.37□□□□□ -0.27
SLC6A1-204ENST00000462473 P0DMU3 169 aa13.37□□□□□ -0.27
SLC6A1-204ENST00000462473 FAM231AP0DMU4 169 aa13.37□□□□□ -0.27
SLC6A1-204ENST00000462473 FAM231CP0DMU5 169 aa13.37□□□□□ -0.27
SLC6A1-204ENST00000462473 RNASE4P34096 147 aaKnown RBP13.37□□□□□ -0.27
SLC6A1-204ENST00000462473 PQLC2Q6ZP29 291 aa13.37□□□□□ -0.27
SLC6A1-204ENST00000462473 ZNF492Q9P255 531 aa13.37□□□□□ -0.27
SLC6A1-204ENST00000462473 CRISP2P16562 243 aa13.36□□□□□ -0.27
SLC6A1-204ENST00000462473 ATP6V0CP27449 155 aa13.36□□□□□ -0.27
SLC6A1-204ENST00000462473 CD300CQ08708 224 aa13.36□□□□□ -0.27
SLC6A1-204ENST00000462473 RXFP4Q8TDU9 374 aa13.36□□□□□ -0.27
SLC6A1-204ENST00000462473 PSMG3Q9BT73 122 aaPredicted RBP13.36□□□□□ -0.27
SLC6A1-204ENST00000462473 RBAKDNA6NC62 111 aa13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 CBY3A6NI87 242 aa13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 SNURFLB1AK76 121 aa13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 F5H768 121 aa13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 HMGB3O15347 200 aaKnown RBP13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 ATP5G1P05496 136 aa13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 NMBP08949 121 aa13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 ATP5G3P48201 142 aa13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 CDC34P49427 236 aaPredicted RBP13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 ZNF138P52744 262 aa13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 BTN1A1Q13410 526 aa13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 FAM74A1Q5RGS3 127 aa13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 TMEM88Q6PEY1 159 aa13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 OR2G3Q8NGZ4 309 aa13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 HYLS1Q96M11 299 aa13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 TNFSF18Q9UNG2 199 aa13.35□□□□□ -0.27
SLC6A1-204ENST00000462473 RNF222A6NCQ9 220 aa13.34□□□□□ -0.27
SLC6A1-204ENST00000462473 PGPA6NDG6 321 aa13.34□□□□□ -0.27
SLC6A1-204ENST00000462473 ZNF324O75467 553 aaPredicted RBP13.34□□□□□ -0.27
SLC6A1-204ENST00000462473 CMTM2Q8TAZ6 248 aa13.34□□□□□ -0.27
SLC6A1-204ENST00000462473 OTORQ9NRC9 128 aa13.34□□□□□ -0.27
SLC6A1-204ENST00000462473 KMT2AQ03164 3969 aa13.33□□□□□ -0.28
SLC6A1-204ENST00000462473 BORCS7-ASMTA0A0B4J1R7 106 aa13.33□□□□□ -0.28
SLC6A1-204ENST00000462473 DIRC3C9JPN6 131 aa13.33□□□□□ -0.28
SLC6A1-204ENST00000462473 MBP02144 154 aa13.33□□□□□ -0.28
SLC6A1-204ENST00000462473 SERF2P84101 59 aa13.33□□□□□ -0.28
SLC6A1-204ENST00000462473 ZFAND2AQ8N6M9 145 aa13.33□□□□□ -0.28
SLC6A1-204ENST00000462473 POM121L12Q8N7R1 296 aa13.33□□□□□ -0.28
SLC6A1-204ENST00000462473 Q8TAT8 98 aa13.33□□□□□ -0.28
SLC6A1-204ENST00000462473 TRBV7-9A0A0J9YWB2 115 aa13.32□□□□□ -0.28
SLC6A1-204ENST00000462473 RPL7L1Q6DKI1 246 aaKnown RBP13.32□□□□□ -0.28
SLC6A1-204ENST00000462473 UBE2DNLQ8IWF7 75 aa13.32□□□□□ -0.28
SLC6A1-204ENST00000462473 EIF4E3Q8N5X7 224 aaKnown RBP13.32□□□□□ -0.28
SLC6A1-204ENST00000462473 RAB24Q969Q5 203 aa13.32□□□□□ -0.28
SLC6A1-204ENST00000462473 GNPNAT1Q96EK6 184 aaPredicted RBP13.32□□□□□ -0.28
SLC6A1-204ENST00000462473 RPH3ALQ9UNE2 315 aa13.32□□□□□ -0.28
SLC6A1-204ENST00000462473 RGS13O14921 159 aa13.31□□□□□ -0.28
SLC6A1-204ENST00000462473 STAG3L2P0CL84 134 aa13.31□□□□□ -0.28
SLC6A1-204ENST00000462473 STAG3L3P0CL85 134 aa13.31□□□□□ -0.28
SLC6A1-204ENST00000462473 ARL14EPLP0DKL9 152 aa13.31□□□□□ -0.28
SLC6A1-204ENST00000462473 PRR9Q5T870 116 aa13.31□□□□□ -0.28
SLC6A1-204ENST00000462473 C15orf53Q8NAA6 179 aa13.31□□□□□ -0.28
SLC6A1-204ENST00000462473 ZNF680Q8NEM1 530 aa13.31□□□□□ -0.28
SLC6A1-204ENST00000462473 LINC00467Q9BRT7 94 aa13.31□□□□□ -0.28
SLC6A1-204ENST00000462473 SH3BGRL3Q9H299 93 aa13.31□□□□□ -0.28
SLC6A1-204ENST00000462473 GAGE12BA1L429 117 aa13.3□□□□□ -0.28
SLC6A1-204ENST00000462473 GAGE7O76087 117 aa13.3□□□□□ -0.28
SLC6A1-204ENST00000462473 GAGE12FP0CL80 117 aa13.3□□□□□ -0.28
SLC6A1-204ENST00000462473 GAGE12GP0CL81 117 aa13.3□□□□□ -0.28
SLC6A1-204ENST00000462473 GAGE12IP0CL82 117 aa13.3□□□□□ -0.28
SLC6A1-204ENST00000462473 ANXA2RQ3ZCQ2 193 aa13.3□□□□□ -0.28
SLC6A1-204ENST00000462473 GSN-AS1Q9NRJ2 163 aa13.3□□□□□ -0.28
SLC6A1-204ENST00000462473 G3V3Q6 166 aa13.29□□□□□ -0.28
SLC6A1-204ENST00000462473 ARPC5O15511 151 aa13.29□□□□□ -0.28
SLC6A1-204ENST00000462473 DAZ2Q13117 558 aaKnown RBP13.29□□□□□ -0.28
SLC6A1-204ENST00000462473 LINC00612Q8N6U2 182 aa13.29□□□□□ -0.28
SLC6A1-204ENST00000462473 ACTR3CQ9C0K3 210 aaPredicted RBP13.29□□□□□ -0.28
SLC6A1-204ENST00000462473 IGHV1OR15-1A0A075B7D0 117 aa13.28□□□□□ -0.28
SLC6A1-204ENST00000462473 OR5I1Q13606 314 aa13.28□□□□□ -0.28
SLC6A1-204ENST00000462473 Q6ZQT7 251 aa13.28□□□□□ -0.28
SLC6A1-204ENST00000462473 GOLT1AQ6ZVE7 132 aa13.28□□□□□ -0.28
SLC6A1-204ENST00000462473 ARL6IP6Q8N6S5 226 aa13.28□□□□□ -0.28
SLC6A1-204ENST00000462473 C11orf72Q8NBR9 251 aa13.28□□□□□ -0.28
SLC6A1-204ENST00000462473 TMED6Q8WW62 240 aa13.28□□□□□ -0.28
SLC6A1-204ENST00000462473 LENEPQ9Y5L5 61 aa13.28□□□□□ -0.28
SLC6A1-204ENST00000462473 TAAR5O14804 337 aa13.27□□□□□ -0.29
SLC6A1-204ENST00000462473 NUDT3O95989 172 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms