RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 SCGB1C1Q8TD33 95 aa6.31□□□□□ -1.4
LDB1-203ENST00000461873 TMEM263Q8WUH6 116 aaKnown RBP6.31□□□□□ -1.4
LDB1-203ENST00000461873 BLNKQ8WV28 456 aa6.31□□□□□ -1.4
LDB1-203ENST00000461873 C17orf77Q96MU5 243 aa6.31□□□□□ -1.4
LDB1-203ENST00000461873 ARPC5LQ9BPX5 153 aa6.31□□□□□ -1.4
LDB1-203ENST00000461873 NOP10Q9NPE3 64 aaKnown RBP6.31□□□□□ -1.4
LDB1-203ENST00000461873 PGPEP1Q9NXJ5 209 aa6.31□□□□□ -1.4
LDB1-203ENST00000461873 TRAV5A0A0B4J249 113 aa6.3□□□□□ -1.4
LDB1-203ENST00000461873 PRSS29PA6NIE9 313 aa6.3□□□□□ -1.4
LDB1-203ENST00000461873 CRXO43186 299 aaPredicted RBP6.3□□□□□ -1.4
LDB1-203ENST00000461873 ZNF253O75346 499 aa6.3□□□□□ -1.4
LDB1-203ENST00000461873 IFNA5P01569 189 aa6.3□□□□□ -1.4
LDB1-203ENST00000461873 FAM3BP58499 235 aaPredicted RBP6.3□□□□□ -1.4
LDB1-203ENST00000461873 LGALS9BQ3B8N2 356 aa6.3□□□□□ -1.4
LDB1-203ENST00000461873 TMEM78Q5T7P6 136 aa6.3□□□□□ -1.4
LDB1-203ENST00000461873 PCNPQ8WW12 178 aaKnown RBP6.3□□□□□ -1.4
LDB1-203ENST00000461873 MRPL53Q96EL3 112 aaKnown RBP6.3□□□□□ -1.4
LDB1-203ENST00000461873 NPCDR1Q9BY65 106 aa6.3□□□□□ -1.4
LDB1-203ENST00000461873 TRGV2A0A075B6R0 118 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 TRAV12-3A0A0B4J271 114 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 MRPS12O15235 138 aaKnown RBP6.29□□□□□ -1.4
LDB1-203ENST00000461873 SLC25A5P05141 298 aaKnown RBP6.29□□□□□ -1.4
LDB1-203ENST00000461873 GPX1P07203 203 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 IGLC2P0DOY2 106 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 AZU1P20160 251 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 TAS2R45P59539 299 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 PDE6HQ13956 83 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 ZNF345Q14585 488 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 VWC2Q2TAL6 325 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 ALKAL2Q6UX46 152 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 HSD17B11Q8NBQ5 300 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 ZNF680Q8NEM1 530 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 LINC00477Q96M19 166 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 ODF3Q96PU9 254 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 PYGO2Q9BRQ0 406 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 TMEM14CQ9P0S9 112 aa6.29□□□□□ -1.4
LDB1-203ENST00000461873 TRBV19A0A075B6N1 114 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 H3BQ15 152 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 SLC17A3O00476 420 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 RGS13O14921 159 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 OR7C2O60412 319 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 PRM2P04554 102 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 PRB4P10163 310 aaPredicted RBP6.28□□□□□ -1.4
LDB1-203ENST00000461873 FAM74A1Q5RGS3 127 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 C1orf134Q5TEV5 83 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 GFI1BQ5VTD9 330 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 SLC51BQ86UW2 128 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 GNPNAT1Q96EK6 184 aaPredicted RBP6.28□□□□□ -1.4
LDB1-203ENST00000461873 ATP5SQ99766 215 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 PAXXQ9BUH6 204 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 MRPL32Q9BYC8 188 aaKnown RBP6.28□□□□□ -1.4
LDB1-203ENST00000461873 SH3BGRL3Q9H299 93 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 OR51M1Q9H341 326 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 ZNF586Q9NXT0 402 aa6.28□□□□□ -1.4
LDB1-203ENST00000461873 BORCS7-ASMTA0A0B4J1R7 106 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 A0A1W2PPV4 95 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 GAGE12BA1L429 117 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 C7orf71A4D174 169 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 PRAC2D3DTV9 90 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 TAAR5O14804 337 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 EIF3GO75821 320 aaKnown RBP eCLIP6.27□□□□□ -1.41
LDB1-203ENST00000461873 GAGE7O76087 117 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 NBEAP1P0C6P0 100 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 GAGE12FP0CL80 117 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 GAGE12GP0CL81 117 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 GAGE12IP0CL82 117 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 PYYP10082 97 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 M6PRP20645 277 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 ATP6V0CP27449 155 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 RNASE4P34096 147 aaKnown RBP6.27□□□□□ -1.41
LDB1-203ENST00000461873 ICAM4Q14773 271 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 MORN5Q5VZ52 161 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 FAM122CQ6P4D5 195 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 TEX261Q6UWH6 196 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 CMTM2Q8TAZ6 248 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 RNASE8Q8TDE3 154 aaKnown RBP6.27□□□□□ -1.41
LDB1-203ENST00000461873 RNF141Q8WVD5 230 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 TMED6Q8WW62 240 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 SAT2Q96F10 170 aaPredicted RBP6.27□□□□□ -1.41
LDB1-203ENST00000461873 PARD6GQ9BYG4 376 aaPredicted RBP6.27□□□□□ -1.41
LDB1-203ENST00000461873 FRAS1Q86XX4 4008 aa6.27□□□□□ -1.41
LDB1-203ENST00000461873 VPS13DQ5THJ4 4388 aa6.26□□□□□ -1.41
LDB1-203ENST00000461873 NPIPB6E9PJ23 425 aa6.26□□□□□ -1.41
LDB1-203ENST00000461873 CT45A10P0DMU9 189 aa6.26□□□□□ -1.41
LDB1-203ENST00000461873 TPT1P13693 172 aaKnown RBP6.26□□□□□ -1.41
LDB1-203ENST00000461873 KHDC3LQ587J8 217 aa6.26□□□□□ -1.41
LDB1-203ENST00000461873 EXOC3-AS1Q8N2X6 119 aa6.26□□□□□ -1.41
LDB1-203ENST00000461873 EIF4E3Q8N5X7 224 aaKnown RBP6.26□□□□□ -1.41
LDB1-203ENST00000461873 WDR61Q9GZS3 305 aaKnown RBP6.26□□□□□ -1.41
LDB1-203ENST00000461873 FUT9Q9Y231 359 aa6.26□□□□□ -1.41
LDB1-203ENST00000461873 TRAV26-1A0A087WT03 109 aa6.25□□□□□ -1.41
LDB1-203ENST00000461873 TRGV1A0A0A0MS02 117 aa6.25□□□□□ -1.41
LDB1-203ENST00000461873 A0A0J9YY99 117 aa6.25□□□□□ -1.41
LDB1-203ENST00000461873 M0R3E3 92 aa6.25□□□□□ -1.41
LDB1-203ENST00000461873 OR10J4P0C629 311 aa6.25□□□□□ -1.41
LDB1-203ENST00000461873 RANP62826 216 aaKnown RBP6.25□□□□□ -1.41
LDB1-203ENST00000461873 UBE2L3P68036 154 aaKnown RBP6.25□□□□□ -1.41
LDB1-203ENST00000461873 ERCC8Q13216 396 aa6.25□□□□□ -1.41
LDB1-203ENST00000461873 FFAR4Q5NUL3 377 aa6.25□□□□□ -1.41
LDB1-203ENST00000461873 MIR17HGQ75NE6 70 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms