RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 KIF1BO60333 1816 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 IGHV1-58A0A0C4DH39 117 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 J3QR89 54 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 RER1O15258 196 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 OR1I1O60431 355 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 TCRAP04437 139 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 SCTP09683 121 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 EVI2AP22794 236 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 CRYGSP22914 178 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 COPZ1P61923 177 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 NCS1P62166 190 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 DYNLT1P63172 113 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 PDE6HQ13956 83 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 CDK5R1Q15078 307 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 C22orf39Q6P5X5 142 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 TMEM14EPQ6UXP3 125 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.04□□□□□ -2.24
HDAC6-212ENST00000461608 CTAGE3PQ8IX95 158 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 Q8N2B8 174 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 LINC00311Q8N616 119 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 SLC30A7Q8NEW0 376 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 OR5H6Q8NGV6 325 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 ZNF418Q8TF45 676 aaPredicted RBP1.04□□□□□ -2.24
HDAC6-212ENST00000461608 ARL11Q969Q4 196 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 LINC00467Q9BRT7 94 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 LINC00470Q9BZP3 86 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 TCEAL2Q9H3H9 227 aaPredicted RBP1.04□□□□□ -2.24
HDAC6-212ENST00000461608 BANF2Q9H503 90 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 FKBP11Q9NYL4 201 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 GNG8Q9UK08 70 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 MYH11P35749 1972 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 FAM135BQ49AJ0 1406 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 FREM1Q5H8C1 2179 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 MED14O60244 1454 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 CDK12Q9NYV4 1490 aaPredicted RBP1.04□□□□□ -2.24
HDAC6-212ENST00000461608 ARHGAP5Q13017 1502 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 CDK13Q14004 1512 aaKnown RBP1.04□□□□□ -2.24
HDAC6-212ENST00000461608 LRRC7Q96NW7 1537 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 FAM135AQ9P2D6 1515 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 KIF14Q15058 1648 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 PREX2Q70Z35 1606 aa1.04□□□□□ -2.24
HDAC6-212ENST00000461608 ZC3H13Q5T200 1668 aaKnown RBP1.04□□□□□ -2.24
HDAC6-212ENST00000461608 PHLPP1O60346 1717 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 CDC42BPAQ5VT25 1732 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 IGKV1D-42A0A075B6H8 117 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 FAM236AA0A1B0GUQ0 79 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 LOC100130705A0A1B0GUX0 176 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 FAM236BA0A1B0GV22 79 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 B4DSR2 109 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 TPST1O60507 370 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 HIST1H2BKO60814 126 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 SMIM24O75264 130 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 HYPMO75409 117 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 SLC25A5P05141 298 aaKnown RBP1.03□□□□□ -2.24
HDAC6-212ENST00000461608 HIST1H2BJP06899 126 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 HLA-EP13747 358 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 RPL22P35268 128 aaKnown RBP1.03□□□□□ -2.24
HDAC6-212ENST00000461608 RPL35P42766 123 aaKnown RBP1.03□□□□□ -2.24
HDAC6-212ENST00000461608 SELENOWP63302 87 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 DIAPH2-AS1Q14236 149 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 WHAMMP3Q1A5X7 153 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 CCSMST1Q4G0I0 132 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 HSD17B12Q53GQ0 312 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 SCIMPQ6UWF3 145 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 OR4C6Q8NH72 309 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 SFT2D1Q8WV19 159 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 PRELID3AQ96N28 172 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 MRPL57Q9BQC6 102 aaKnown RBP1.03□□□□□ -2.24
HDAC6-212ENST00000461608 REG4Q9BYZ8 158 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 BCL2L10Q9HD36 194 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 C14orf132Q9NPU4 83 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 MED23Q9ULK4 1368 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 CLIP1P30622 1438 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 FGD6Q6ZV73 1430 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 LRRC9Q6ZRR7 1453 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 NLRP1Q9C000 1473 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 ABCC1P33527 1531 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 KDM5DQ9BY66 1539 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 PLXNC1O60486 1568 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 GLI3P10071 1580 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 INO80Q9ULG1 1556 aaPredicted RBP1.03□□□□□ -2.24
HDAC6-212ENST00000461608 LRP5O75197 1615 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 SHPRHQ149N8 1683 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 ROBO1Q9Y6N7 1651 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 LRRIQ1Q96JM4 1722 aa1.03□□□□□ -2.24
HDAC6-212ENST00000461608 ZFHX2Q9C0A1 2572 aaPredicted RBP1.02□□□□□ -2.25
HDAC6-212ENST00000461608 OVOS2A0A0J9YW53 1432 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 TRBV27A0A0K0K1C4 114 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 SPAARA0A1B0GVQ0 90 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 ZNF727A8MUV8 499 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 F6UZH7 168 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 NPFFO15130 113 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 ABCC3O15438 1527 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 TIMM17BO60830 172 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 A2MP01023 1474 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 IFNGP01579 166 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 MGST1P10620 155 aaKnown RBP1.02□□□□□ -2.25
HDAC6-212ENST00000461608 PZPP20742 1482 aa1.02□□□□□ -2.25
HDAC6-212ENST00000461608 KDM5AP29375 1690 aaKnown RBP1.02□□□□□ -2.25
HDAC6-212ENST00000461608 MYL5Q02045 173 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms