RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 KIR3DS1Q14943 382 aa10.58□□□□□ -0.72
NCK1-202ENST00000460960 CSNK1G2-AS1Q8NCQ2 148 aa10.58□□□□□ -0.72
NCK1-202ENST00000460960 BOLA2-SMG1P6H3BVE0 249 aa10.57□□□□□ -0.72
NCK1-202ENST00000460960 PSG9Q00887 426 aa10.57□□□□□ -0.72
NCK1-202ENST00000460960 SPINK13Q1W4C9 94 aa10.57□□□□□ -0.72
NCK1-202ENST00000460960 LCE2DQ5TA82 110 aaPredicted RBP10.57□□□□□ -0.72
NCK1-202ENST00000460960 FAM213BQ8TBF2 198 aa10.57□□□□□ -0.72
NCK1-202ENST00000460960 SUN5Q8TC36 379 aa10.57□□□□□ -0.72
NCK1-202ENST00000460960 CLUHP3Q96NS8 147 aa10.57□□□□□ -0.72
NCK1-202ENST00000460960 IGHV4-4A0A075B6R2 117 aa10.56□□□□□ -0.72
NCK1-202ENST00000460960 A0A1B0GV50 99 aa10.56□□□□□ -0.72
NCK1-202ENST00000460960 MAP1LC3B2A6NCE7 125 aa10.56□□□□□ -0.72
NCK1-202ENST00000460960 PRSS29PA6NIE9 313 aa10.56□□□□□ -0.72
NCK1-202ENST00000460960 M0R2N4 97 aa10.56□□□□□ -0.72
NCK1-202ENST00000460960 CXorf1O96002 111 aa10.56□□□□□ -0.72
NCK1-202ENST00000460960 FAM74A1Q5RGS3 127 aa10.56□□□□□ -0.72
NCK1-202ENST00000460960 MORN3Q6PF18 240 aaPredicted RBP10.56□□□□□ -0.72
NCK1-202ENST00000460960 SLC51BQ86UW2 128 aa10.56□□□□□ -0.72
NCK1-202ENST00000460960 IQCF2Q8IXL9 164 aa10.56□□□□□ -0.72
NCK1-202ENST00000460960 MRPL53Q96EL3 112 aaKnown RBP10.56□□□□□ -0.72
NCK1-202ENST00000460960 VGLL1Q99990 258 aa10.56□□□□□ -0.72
NCK1-202ENST00000460960 MAP1LC3BQ9GZQ8 125 aa10.56□□□□□ -0.72
NCK1-202ENST00000460960 TRAV12-2A0A075B6T6 113 aa10.55□□□□□ -0.72
NCK1-202ENST00000460960 TRAV10A0A0B4J240 114 aa10.55□□□□□ -0.72
NCK1-202ENST00000460960 A0A1B0GVY2 172 aa10.55□□□□□ -0.72
NCK1-202ENST00000460960 PGPA6NDG6 321 aa10.55□□□□□ -0.72
NCK1-202ENST00000460960 NPIPB6E9PJ23 425 aa10.55□□□□□ -0.72
NCK1-202ENST00000460960 CRXO43186 299 aaPredicted RBP10.55□□□□□ -0.72
NCK1-202ENST00000460960 DUSP14O95147 198 aaKnown RBP10.55□□□□□ -0.72
NCK1-202ENST00000460960 RBMY1A1P0DJD3 496 aaKnown RBP10.55□□□□□ -0.72
NCK1-202ENST00000460960 RBMY1CP0DJD4 496 aa10.55□□□□□ -0.72
NCK1-202ENST00000460960 CT45A10P0DMU9 189 aa10.55□□□□□ -0.72
NCK1-202ENST00000460960 GNG5P63218 68 aa10.55□□□□□ -0.72
NCK1-202ENST00000460960 RBMY1FQ15415 496 aaKnown RBP10.55□□□□□ -0.72
NCK1-202ENST00000460960 Q6ZTC4 211 aa10.55□□□□□ -0.72
NCK1-202ENST00000460960 AGPAT4-IT1Q9H0P7 198 aa10.55□□□□□ -0.72
NCK1-202ENST00000460960 AAMDCQ9H7C9 122 aa10.55□□□□□ -0.72
NCK1-202ENST00000460960 YTHDF2Q9Y5A9 579 aaKnown RBP10.55□□□□□ -0.72
NCK1-202ENST00000460960 IGHV4-28A0A0C4DH34 117 aa10.54□□□□□ -0.72
NCK1-202ENST00000460960 GGTLC3B5MD39 225 aa10.54□□□□□ -0.72
NCK1-202ENST00000460960 PRM2P04554 102 aa10.54□□□□□ -0.72
NCK1-202ENST00000460960 UBE2G2P60604 165 aa10.54□□□□□ -0.72
NCK1-202ENST00000460960 EIF5AP63241 154 aaKnown RBP10.54□□□□□ -0.72
NCK1-202ENST00000460960 Q8NAQ8 132 aa10.54□□□□□ -0.72
NCK1-202ENST00000460960 OR10J6PQ8NGY7 276 aa10.54□□□□□ -0.72
NCK1-202ENST00000460960 OTORQ9NRC9 128 aa10.54□□□□□ -0.72
NCK1-202ENST00000460960 RPH3ALQ9UNE2 315 aa10.54□□□□□ -0.72
NCK1-202ENST00000460960 PRELID1Q9Y255 219 aa10.54□□□□□ -0.72
NCK1-202ENST00000460960 X6R8D5 127 aa10.54□□□□□ -0.72
NCK1-202ENST00000460960 UMAD1C9J7I0 102 aa10.53□□□□□ -0.72
NCK1-202ENST00000460960 C1orf158Q8N1D5 194 aa10.53□□□□□ -0.72
NCK1-202ENST00000460960 LYPD1Q8N2G4 141 aa10.53□□□□□ -0.72
NCK1-202ENST00000460960 Q8TAT8 98 aa10.53□□□□□ -0.72
NCK1-202ENST00000460960 MBD3L1Q8WWY6 194 aa10.53□□□□□ -0.72
NCK1-202ENST00000460960 DIRC3C9JPN6 131 aa10.52□□□□□ -0.73
NCK1-202ENST00000460960 J3KRW8 73 aa10.52□□□□□ -0.73
NCK1-202ENST00000460960 SULT1A2P50226 295 aa10.52□□□□□ -0.73
NCK1-202ENST00000460960 CCL20P78556 96 aa10.52□□□□□ -0.73
NCK1-202ENST00000460960 ALKAL2Q6UX46 152 aa10.52□□□□□ -0.73
NCK1-202ENST00000460960 SFT2D1Q8WV19 159 aa10.52□□□□□ -0.73
NCK1-202ENST00000460960 TMEM167BQ9NRX6 74 aa10.52□□□□□ -0.73
NCK1-202ENST00000460960 PKHD1P08F94 4074 aa10.52□□□□□ -0.73
NCK1-202ENST00000460960 IGHV3OR16-12A0A075B7B8 117 aa10.51□□□□□ -0.73
NCK1-202ENST00000460960 NUTF2P61970 127 aaKnown RBP10.51□□□□□ -0.73
NCK1-202ENST00000460960 PRR9Q5T870 116 aa10.51□□□□□ -0.73
NCK1-202ENST00000460960 Q6ZQT7 251 aa10.51□□□□□ -0.73
NCK1-202ENST00000460960 C9orf47Q6ZRZ4 202 aa10.51□□□□□ -0.73
NCK1-202ENST00000460960 ZNF767PQ75MW2 155 aa10.51□□□□□ -0.73
NCK1-202ENST00000460960 FAM19A4Q96LR4 140 aa10.51□□□□□ -0.73
NCK1-202ENST00000460960 TRAV8-1A0A0A6YYK1 113 aa10.5□□□□□ -0.73
NCK1-202ENST00000460960 FAM74A7A6NL05 159 aa10.5□□□□□ -0.73
NCK1-202ENST00000460960 ZNF705EA8MWA4 302 aaPredicted RBP10.5□□□□□ -0.73
NCK1-202ENST00000460960 RTL8CO15255 209 aa10.5□□□□□ -0.73
NCK1-202ENST00000460960 SLC25A5P05141 298 aaKnown RBP10.5□□□□□ -0.73
NCK1-202ENST00000460960 H2AFB1P0C5Y9 115 aa10.5□□□□□ -0.73
NCK1-202ENST00000460960 MIFP14174 115 aa10.5□□□□□ -0.73
NCK1-202ENST00000460960 SUMO1P63165 101 aaKnown RBP10.5□□□□□ -0.73
NCK1-202ENST00000460960 DPPA3Q6W0C5 159 aa10.5□□□□□ -0.73
NCK1-202ENST00000460960 ZNF705AQ6ZN79 300 aaPredicted RBP10.5□□□□□ -0.73
NCK1-202ENST00000460960 GOLT1AQ6ZVE7 132 aa10.5□□□□□ -0.73
NCK1-202ENST00000460960 POM121L12Q8N7R1 296 aa10.5□□□□□ -0.73
NCK1-202ENST00000460960 SGK494Q96LW2 274 aa10.5□□□□□ -0.73
NCK1-202ENST00000460960 IGF2BP2-AS1Q96M15 143 aa10.5□□□□□ -0.73
NCK1-202ENST00000460960 FAT2Q9NYQ8 4349 aa10.49□□□□□ -0.73
NCK1-202ENST00000460960 DEFB131BA0A096LNP1 70 aa10.49□□□□□ -0.73
NCK1-202ENST00000460960 P0DMU3 169 aa10.49□□□□□ -0.73
NCK1-202ENST00000460960 FAM231AP0DMU4 169 aa10.49□□□□□ -0.73
NCK1-202ENST00000460960 FAM231CP0DMU5 169 aa10.49□□□□□ -0.73
NCK1-202ENST00000460960 CSN1S1P47710 185 aa10.49□□□□□ -0.73
NCK1-202ENST00000460960 GFI1BQ5VTD9 330 aa10.49□□□□□ -0.73
NCK1-202ENST00000460960 ZFAND2AQ8N6M9 145 aa10.49□□□□□ -0.73
NCK1-202ENST00000460960 C1QTNF4Q9BXJ3 329 aa10.49□□□□□ -0.73
NCK1-202ENST00000460960 PPP1R14DQ9NXH3 145 aa10.49□□□□□ -0.73
NCK1-202ENST00000460960 DNAH2Q9P225 4427 aa10.49□□□□□ -0.73
NCK1-202ENST00000460960 A0A1W2PRE2 83 aa10.48□□□□□ -0.73
NCK1-202ENST00000460960 CDKN1BP46527 198 aa10.48□□□□□ -0.73
NCK1-202ENST00000460960 ATP5G3P48201 142 aa10.48□□□□□ -0.73
NCK1-202ENST00000460960 EIF5AL1Q6IS14 154 aaKnown RBP10.48□□□□□ -0.73
NCK1-202ENST00000460960 ZNF575Q86XF7 245 aa10.48□□□□□ -0.73
NCK1-202ENST00000460960 UBE2DNLQ8IWF7 75 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms