RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, human

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRD-208	ENST00000460627	FAM231D	Q6ZW35	169 aa		13.93	□□□□□ -0.18
CHRD-208	ENST00000460627	UBE2C	O00762	179 aa		13.93	□□□□□ -0.18
CHRD-208	ENST00000460627	LGALS1	P09382	135 aa	Known RBP	13.93	□□□□□ -0.18
CHRD-208	ENST00000460627		Q8N9W7	124 aa		13.93	□□□□□ -0.18
CHRD-208	ENST00000460627	SMPX	Q9UHP9	88 aa		13.93	□□□□□ -0.18
CHRD-208	ENST00000460627	RHOD	O00212	210 aa		13.93	□□□□□ -0.18
CHRD-208	ENST00000460627	FOXE3	Q13461	319 aa		13.92	□□□□□ -0.18
CHRD-208	ENST00000460627	SPINK13	Q1W4C9	94 aa		13.92	□□□□□ -0.18
CHRD-208	ENST00000460627	DEFB121	Q5J5C9	76 aa		13.92	□□□□□ -0.18
CHRD-208	ENST00000460627	CFAP161	Q6P656	301 aa		13.92	□□□□□ -0.18
CHRD-208	ENST00000460627	HIST1H2BL	Q99880	126 aa		13.92	□□□□□ -0.18
CHRD-208	ENST00000460627	GAGE10	A6NGK3	116 aa		13.92	□□□□□ -0.18
CHRD-208	ENST00000460627	CEP295	Q9C0D2	2601 aa		13.92	□□□□□ -0.18
CHRD-208	ENST00000460627		A0A087WX48	190 aa		13.92	□□□□□ -0.18
CHRD-208	ENST00000460627	CIDEA	O60543	219 aa		13.92	□□□□□ -0.18
CHRD-208	ENST00000460627	FSTL3	O95633	263 aa		13.92	□□□□□ -0.18
CHRD-208	ENST00000460627	SIRPD	Q9H106	197 aa		13.92	□□□□□ -0.18
CHRD-208	ENST00000460627	XCL2	Q9UBD3	114 aa		13.92	□□□□□ -0.18
CHRD-208	ENST00000460627	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.92	□□□□□ -0.18
CHRD-208	ENST00000460627	IGLV11-55	A0A075B6I3	123 aa		13.91	□□□□□ -0.18
CHRD-208	ENST00000460627	WDR87	Q6ZQQ6	2873 aa		13.91	□□□□□ -0.18
CHRD-208	ENST00000460627	ADARB2-AS1	A8MUL3	147 aa		13.91	□□□□□ -0.18
CHRD-208	ENST00000460627	NCKAP5	O14513	1909 aa		13.91	□□□□□ -0.18
CHRD-208	ENST00000460627	NAV3	Q8IVL0	2385 aa		13.91	□□□□□ -0.18
CHRD-208	ENST00000460627	NDUFS6	O75380	124 aa	Known RBP	13.91	□□□□□ -0.18
CHRD-208	ENST00000460627	HIST3H2BB	Q8N257	126 aa		13.91	□□□□□ -0.18
CHRD-208	ENST00000460627	OR9G4	Q8NGQ1	327 aa		13.91	□□□□□ -0.18
CHRD-208	ENST00000460627	MS4A6A	Q9H2W1	248 aa		13.91	□□□□□ -0.18
CHRD-208	ENST00000460627	TRAV9-2	A0A087WT02	112 aa		13.9	□□□□□ -0.18
CHRD-208	ENST00000460627	CDKN1B	P46527	198 aa		13.9	□□□□□ -0.18
CHRD-208	ENST00000460627	GFI1B	Q5VTD9	330 aa		13.9	□□□□□ -0.18
CHRD-208	ENST00000460627		K7EIM0	57 aa		13.9	□□□□□ -0.18
CHRD-208	ENST00000460627	BLCAP	P62952	87 aa		13.9	□□□□□ -0.18
CHRD-208	ENST00000460627	AMN1	Q8IY45	258 aa		13.9	□□□□□ -0.18
CHRD-208	ENST00000460627	CYYR1	Q96J86	154 aa		13.9	□□□□□ -0.18
CHRD-208	ENST00000460627	INS-IGF2	F8WCM5	200 aa		13.9	□□□□□ -0.18
CHRD-208	ENST00000460627	EML6	Q6ZMW3	1958 aa		13.9	□□□□□ -0.18
CHRD-208	ENST00000460627		I3L2K1	104 aa		13.9	□□□□□ -0.18
CHRD-208	ENST00000460627	CTAG1A	P78358	180 aa		13.9	□□□□□ -0.18
CHRD-208	ENST00000460627	CGB3	P0DN86	165 aa		13.89	□□□□□ -0.19
CHRD-208	ENST00000460627	CGB7	P0DN87	165 aa		13.89	□□□□□ -0.19
CHRD-208	ENST00000460627	C22orf34	Q6ZV56	151 aa		13.89	□□□□□ -0.19
CHRD-208	ENST00000460627	DPH3	Q96FX2	82 aa		13.89	□□□□□ -0.19
CHRD-208	ENST00000460627	ATP6V0B	Q99437	205 aa		13.89	□□□□□ -0.19
CHRD-208	ENST00000460627	LINC00574	Q9H8X3	128 aa		13.89	□□□□□ -0.19
CHRD-208	ENST00000460627	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.89	□□□□□ -0.19
CHRD-208	ENST00000460627	IGHV3-73	A0A0B4J1V6	119 aa		13.89	□□□□□ -0.19
CHRD-208	ENST00000460627		A0A1B0GUS0	222 aa		13.89	□□□□□ -0.19
CHRD-208	ENST00000460627	CRP	P02741	224 aa		13.89	□□□□□ -0.19
CHRD-208	ENST00000460627	HOXD3	P31249	432 aa	Predicted RBP	13.89	□□□□□ -0.19
CHRD-208	ENST00000460627	ODF3L1	Q8IXM7	274 aa		13.89	□□□□□ -0.19
CHRD-208	ENST00000460627	C5orf56	Q8N8D9	126 aa		13.89	□□□□□ -0.19
CHRD-208	ENST00000460627	IGHV1OR15-1	A0A075B7D0	117 aa		13.89	□□□□□ -0.19
CHRD-208	ENST00000460627	LMO4	P61968	165 aa		13.89	□□□□□ -0.19
CHRD-208	ENST00000460627	IGKV1-17	P01599	117 aa		13.88	□□□□□ -0.19
CHRD-208	ENST00000460627	IGHV3-53	P01767	116 aa		13.88	□□□□□ -0.19
CHRD-208	ENST00000460627	MAL	P21145	153 aa		13.88	□□□□□ -0.19
CHRD-208	ENST00000460627	LOXL1	Q08397	574 aa	Predicted RBP	13.88	□□□□□ -0.19
CHRD-208	ENST00000460627	OR13C6P	Q8NH95	151 aa		13.88	□□□□□ -0.19
CHRD-208	ENST00000460627	IGFBPL1	Q8WX77	278 aa		13.88	□□□□□ -0.19
CHRD-208	ENST00000460627	PRSS46	E5RG02	174 aa		13.88	□□□□□ -0.19
CHRD-208	ENST00000460627	C19orf84	I3L1E1	186 aa		13.88	□□□□□ -0.19
CHRD-208	ENST00000460627	NUP210L	Q5VU65	1888 aa		13.88	□□□□□ -0.19
CHRD-208	ENST00000460627	DYSF	O75923	2080 aa		13.87	□□□□□ -0.19
CHRD-208	ENST00000460627	MRPL53	Q96EL3	112 aa	Known RBP	13.87	□□□□□ -0.19
CHRD-208	ENST00000460627	C8orf49	Q96NF6	230 aa		13.87	□□□□□ -0.19
CHRD-208	ENST00000460627	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.87	□□□□□ -0.19
CHRD-208	ENST00000460627	IGKC	P01834	107 aa		13.87	□□□□□ -0.19
CHRD-208	ENST00000460627	SMIM13	P0DJ93	91 aa		13.87	□□□□□ -0.19
CHRD-208	ENST00000460627	SSBP2	P81877	361 aa	Predicted RBP	13.87	□□□□□ -0.19
CHRD-208	ENST00000460627	LRRC75A-AS1	Q8N1F1	130 aa		13.87	□□□□□ -0.19
CHRD-208	ENST00000460627	OR2K2	Q8NGT1	345 aa		13.87	□□□□□ -0.19
CHRD-208	ENST00000460627	ST6GALNAC6	Q969X2	333 aa		13.87	□□□□□ -0.19
CHRD-208	ENST00000460627	CSTL1	Q9H114	145 aa		13.87	□□□□□ -0.19
CHRD-208	ENST00000460627	SEC11A	P67812	179 aa		13.87	□□□□□ -0.19
CHRD-208	ENST00000460627	RITA1	Q96K30	269 aa		13.87	□□□□□ -0.19
CHRD-208	ENST00000460627	LENEP	Q9Y5L5	61 aa		13.86	□□□□□ -0.19
CHRD-208	ENST00000460627		A0A087WWL8	130 aa		13.86	□□□□□ -0.19
CHRD-208	ENST00000460627	CCL24	O00175	119 aa		13.86	□□□□□ -0.19
CHRD-208	ENST00000460627	SNAI2	O43623	268 aa		13.86	□□□□□ -0.19
CHRD-208	ENST00000460627	TMEM95	Q3KNT9	176 aa		13.86	□□□□□ -0.19
CHRD-208	ENST00000460627	CHD3	Q12873	2000 aa	Known RBP	13.86	□□□□□ -0.19
CHRD-208	ENST00000460627	CRYGC	P07315	174 aa		13.86	□□□□□ -0.19
CHRD-208	ENST00000460627	C5orf30	Q96GV9	206 aa		13.86	□□□□□ -0.19
CHRD-208	ENST00000460627	IGLV2-23	P01705	113 aa		13.85	□□□□□ -0.19
CHRD-208	ENST00000460627	IGLV2-14	P01704	120 aa		13.85	□□□□□ -0.19
CHRD-208	ENST00000460627	DEFB130B	P0DP73	79 aa		13.85	□□□□□ -0.19
CHRD-208	ENST00000460627	DEFB130A	P0DP74	79 aa		13.85	□□□□□ -0.19
CHRD-208	ENST00000460627	LY6G5B	Q8NDX9	201 aa		13.85	□□□□□ -0.19
CHRD-208	ENST00000460627	TRPT1	Q86TN4	253 aa	Known RBP	13.85	□□□□□ -0.19
CHRD-208	ENST00000460627	OR5A1	Q8NGJ0	315 aa		13.85	□□□□□ -0.19
CHRD-208	ENST00000460627	TMEM256	Q8N2U0	113 aa		13.85	□□□□□ -0.19
CHRD-208	ENST00000460627	DSCAM	O60469	2012 aa		13.84	□□□□□ -0.19
CHRD-208	ENST00000460627	LOC105371267	A0A1B0GV96	52 aa		13.84	□□□□□ -0.19
CHRD-208	ENST00000460627		A8MWV9	139 aa		13.84	□□□□□ -0.19
CHRD-208	ENST00000460627	PLP1	P60201	277 aa		13.84	□□□□□ -0.19
CHRD-208	ENST00000460627	LINC00469	Q8N7U9	141 aa		13.84	□□□□□ -0.19
CHRD-208	ENST00000460627	CTSG	P08311	255 aa		13.84	□□□□□ -0.19
CHRD-208	ENST00000460627	LYPD6B	Q8NI32	183 aa		13.84	□□□□□ -0.19
CHRD-208	ENST00000460627	CBY1	Q9Y3M2	126 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms