RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 HIF1ANQ9NWT6 349 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 C21orf62Q9NYP8 219 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 SIGLEC8Q9NYZ4 499 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 PEF1Q9UBV8 284 aaKnown RBP4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 HLA-DRB4X5D2U9 266 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 ARHGAP32A7KAX9 2087 aa4.79□□□□□ -1.64
UBQLN4-202ENST00000459954 UTP20O75691 2785 aaKnown RBP4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 LOC105371242A0A075B767 164 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 A0A096LNJ9 63 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 A6NDN8 102 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 FABP5P3A8MUU1 101 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 F8W735 103 aaPredicted RBP4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 H3BRM9 83 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 H3BTX0 84 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 M0QZ24 198 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 SH2D1AO60880 128 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 COX7A1P24310 79 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 RBX1P62877 108 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 HSD52Q0P140 79 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 KIR3DS1Q14943 382 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 VAMP3Q15836 100 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 TM4SF20Q53R12 229 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 TMEM97Q5BJF2 176 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 C2orf91Q6ZV80 131 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 FER1L6-AS1Q8NA97 138 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 ARPC1AQ92747 370 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 MRPL53Q96EL3 112 aaKnown RBP4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 C17orf77Q96MU5 243 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 ASCL2Q99929 193 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 CITED2Q99967 270 aaPredicted RBP4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 SLC50A1Q9BRV3 221 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 SPXQ9BT56 116 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 ZMAT4Q9H898 229 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 NXT2Q9NPJ8 142 aaKnown RBP4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 SMPXQ9UHP9 88 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 RABAC1Q9UI14 185 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 APCP25054 2843 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 NAV2Q8IVL1 2488 aa4.78□□□□□ -1.64
UBQLN4-202ENST00000459954 ABCA4P78363 2273 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 SETXQ7Z333 2677 aaKnown RBP4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 MUC21A0A0G2JKD1 596 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 MUC21A0A140T8X8 626 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 D6R8Y8 96 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 CSN3P07498 182 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 CTSGP08311 255 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 APELAP0DMC3 54 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 FGF6P10767 208 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 CD24P25063 80 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 CKS2P33552 79 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 IFI27P40305 119 aaPredicted RBP4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 ZNF138P52744 262 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 MRPL51Q4U2R6 128 aaKnown RBP4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 MUC21Q5SSG8 566 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 LDLRAD2Q5SZI1 272 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 C11orf71Q6IPW1 123 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 FAM110DQ8TAY7 271 aaPredicted RBP4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 IFI27L1Q96BM0 104 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 C8orf49Q96NF6 230 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 MAP1LC3AQ9H492 121 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 HIGD1BQ9P298 99 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 ONECUT1Q9UBC0 465 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 LENEPQ9Y5L5 61 aa4.77□□□□□ -1.65
UBQLN4-202ENST00000459954 IGHV4-4A0A075B6R2 117 aa4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 A1L4Q6 167 aa4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 C9orf118A6NHY6 69 aa4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 M0R3E3 92 aa4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 SMAD7O15105 426 aaKnown RBP4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 ATP5LO75964 103 aa4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 IGHG4P01861 327 aa4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 EGR2P11161 476 aaPredicted RBP4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 FCER1GP30273 86 aa4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 KLF17Q5JT82 389 aaPredicted RBP4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 PRSS57Q6UWY2 283 aa4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 GTF2H5Q6ZYL4 71 aa4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 LHFPL4Q7Z7J7 247 aa4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 DTX2Q86UW9 622 aa4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 RNASE8Q8TDE3 154 aaKnown RBP4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 SPG11Q96JI7 2443 aa4.76□□□□□ -1.65
UBQLN4-202ENST00000459954 ABCA12Q86UK0 2595 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 IGHV7-81A0A0B4J1V7 117 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 TMEM213A2RRL7 107 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 C7orf71A4D174 169 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 LYNX1G3V0Z9 82 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 K7EMI3 77 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 NDUFS7O75251 213 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 NCR2O95944 276 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 FAM106CPP0CH98 169 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 LYNX1P0DP58 116 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 EVI2AP22794 236 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 GRNP28799 593 aaKnown RBP4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 CACNG7P62955 275 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 CDSNQ15517 529 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 UFSP1Q6NVU6 142 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 VMO1Q7Z5L0 202 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 ZNF575Q86XF7 245 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 AMN1Q8IY45 258 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 LRRC75A-AS1Q8N1F1 130 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 Q8N8P6 123 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 Q8N9W7 124 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 LINC01560Q8TB33 94 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms