RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 OSTCQ9NRP0 149 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 SMAD5-AS1Q9Y6J3 95 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 TRAV9-1A0A075B6T8 112 aa6.79□□□□□ -1.32
VPS50-207ENST00000458530 TRAV34A0A0B4J273 112 aa6.79□□□□□ -1.32
VPS50-207ENST00000458530 TMEM213A2RRL7 107 aa6.79□□□□□ -1.32
VPS50-207ENST00000458530 PAFAH1B2P68402 229 aa6.79□□□□□ -1.32
VPS50-207ENST00000458530 KLF5Q13887 457 aaPredicted RBP6.79□□□□□ -1.32
VPS50-207ENST00000458530 IBA57Q5T440 356 aaKnown RBP6.79□□□□□ -1.32
VPS50-207ENST00000458530 FAM231DQ6ZW35 169 aa6.79□□□□□ -1.32
VPS50-207ENST00000458530 TCF24Q7RTU0 167 aa6.79□□□□□ -1.32
VPS50-207ENST00000458530 TMEM183AQ8IXX5 376 aa6.79□□□□□ -1.32
VPS50-207ENST00000458530 OR11H1Q8NG94 326 aa6.79□□□□□ -1.32
VPS50-207ENST00000458530 DAZAP1Q96EP5 407 aaKnown RBP6.79□□□□□ -1.32
VPS50-207ENST00000458530 ZNF492Q9P255 531 aa6.79□□□□□ -1.32
VPS50-207ENST00000458530 MLXQ9UH92 298 aa6.79□□□□□ -1.32
VPS50-207ENST00000458530 PSG8Q9UQ74 426 aa6.79□□□□□ -1.32
VPS50-207ENST00000458530 PGPEP1LA6NFU8 196 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 C2orf70A6NJV1 201 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 K7EN84 100 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 M0R3E3 92 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 OVOL1O14753 267 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 PROK1P58294 105 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 SNRPD3P62318 126 aaKnown RBP6.78□□□□□ -1.32
VPS50-207ENST00000458530 TCTEX1D4Q5JR98 221 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 TMEM78Q5T7P6 136 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 LCN12Q6JVE5 192 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 PRNTQ86SH4 94 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 GBGT1Q8N5D6 347 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 ZNF738Q8NE65 137 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 OR4B1Q8NGF8 309 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 OR9G4Q8NGQ1 327 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 DYNLRB2Q8TF09 96 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 RYR3Q15413 4870 aa6.78□□□□□ -1.32
VPS50-207ENST00000458530 TRAV2A0A0B4J234 112 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 KRTAP9-6A0A140TA67 174 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 ZNF705GA8MUZ8 300 aaPredicted RBP6.77□□□□□ -1.33
VPS50-207ENST00000458530 CCL24O00175 119 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 GATCO43716 136 aaKnown RBP6.77□□□□□ -1.33
VPS50-207ENST00000458530 IGLV2-8P01709 118 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 CD28P10747 220 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 CBLN1P23435 193 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 SLURP1P55000 103 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 FHL3Q13643 280 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 DEFB136Q30KP8 78 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 CT83Q5H943 113 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 NDUFA11Q86Y39 141 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 OR10J6PQ8NGY7 276 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 LINC00479Q96M42 142 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 AURKAIP1Q9NWT8 199 aaPredicted RBP6.77□□□□□ -1.33
VPS50-207ENST00000458530 IL36BQ9NZH7 164 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 LENEPQ9Y5L5 61 aa6.77□□□□□ -1.33
VPS50-207ENST00000458530 TRBV24-1A0A075B6N3 115 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 IGKV2-40A0A087WW87 121 aaPredicted RBP6.76□□□□□ -1.33
VPS50-207ENST00000458530 A0A1W2PRX2 142 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 XKRY2A2RUG3 117 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 IGKV2D-40P01614 121 aaPredicted RBP6.76□□□□□ -1.33
VPS50-207ENST00000458530 IGLV2-11P01706 119 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 P01737 135 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 FOLR2P14207 255 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 RAB5AP20339 215 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 OR5I1Q13606 314 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 ELOBQ15370 118 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 COX19Q49B96 90 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 PRR27Q6MZM9 219 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 CDPF1Q6NVV7 123 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 FAM24BQ8N5W8 94 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 RNF182Q8N6D2 247 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 NHLRC2Q8NBF2 726 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 CITED2Q99967 270 aaPredicted RBP6.76□□□□□ -1.33
VPS50-207ENST00000458530 MLST8Q9BVC4 326 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 URGCP-MRPS24S4R325 110 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 TENM3Q9P273 2699 aa6.76□□□□□ -1.33
VPS50-207ENST00000458530 TRAV8-1A0A0A6YYK1 113 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 TRAV8-2A0A0B4J237 113 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 TRAV25A0A0B4J276 109 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 TRBV7-9A0A0J9YWB2 115 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 COLCA2A8K830 154 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 A8MWL6 223 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 SOCS3O14543 225 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 ZNF138P52744 262 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 SMUG1Q53HV7 270 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 FAM162BQ5T6X4 162 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 RBPMS2Q6ZRY4 209 aaKnown RBP6.75□□□□□ -1.33
VPS50-207ENST00000458530 C9orf47Q6ZRZ4 202 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 C18orf65Q6ZTR6 163 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 COX8CQ7Z4L0 72 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 RAX2Q96IS3 184 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 FAM210BQ96KR6 192 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 LINC00477Q96M19 166 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 RNASE7Q9H1E1 156 aaKnown RBP6.75□□□□□ -1.33
VPS50-207ENST00000458530 RPP21Q9H633 154 aaKnown RBP6.75□□□□□ -1.33
VPS50-207ENST00000458530 PPP1R14DQ9NXH3 145 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 SIGLEC8Q9NYZ4 499 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 V9GYV3 84 aa6.75□□□□□ -1.33
VPS50-207ENST00000458530 A0A1W2PPQ1 181 aa6.74□□□□□ -1.33
VPS50-207ENST00000458530 C1orf196B1AJZ1 125 aa6.74□□□□□ -1.33
VPS50-207ENST00000458530 PFN1P07737 140 aaKnown RBP6.74□□□□□ -1.33
VPS50-207ENST00000458530 HLA-DMBP28068 263 aa6.74□□□□□ -1.33
VPS50-207ENST00000458530 FAM3BP58499 235 aaPredicted RBP6.74□□□□□ -1.33
VPS50-207ENST00000458530 RPS20P60866 119 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms