RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 NDUFA4L2Q9NRX3 87 aa15.69■□□□□ 0.1
SNX27-204ENST00000458013 RNF114Q9Y508 228 aa15.69■□□□□ 0.1
SNX27-204ENST00000458013 TMEM14BQ9NUH8 114 aa15.69■□□□□ 0.1
SNX27-204ENST00000458013 SEC16AO15027 2179 aa15.69■□□□□ 0.1
SNX27-204ENST00000458013 FAM104BQ5XKR9 115 aa15.69■□□□□ 0.1
SNX27-204ENST00000458013 OVOL2Q9BRP0 275 aa15.69■□□□□ 0.1
SNX27-204ENST00000458013 LRRK1Q38SD2 2015 aa15.68■□□□□ 0.1
SNX27-204ENST00000458013 VWC2Q2TAL6 325 aa15.68■□□□□ 0.1
SNX27-204ENST00000458013 TRBV19A0A075B6N1 114 aa15.68■□□□□ 0.1
SNX27-204ENST00000458013 NPSP0C0P6 89 aa15.68■□□□□ 0.1
SNX27-204ENST00000458013 IGHV1OR15-1A0A075B7D0 117 aa15.68■□□□□ 0.1
SNX27-204ENST00000458013 SDHAF1A6NFY7 115 aa15.68■□□□□ 0.1
SNX27-204ENST00000458013 DEFB136Q30KP8 78 aa15.68■□□□□ 0.1
SNX27-204ENST00000458013 RP1L1Q8IWN7 2480 aaPredicted RBP15.67■□□□□ 0.1
SNX27-204ENST00000458013 GNRH2O43555 120 aa15.67■□□□□ 0.1
SNX27-204ENST00000458013 hADV29S1A0JD25 119 aa15.67■□□□□ 0.1
SNX27-204ENST00000458013 K7EMI3 77 aa15.67■□□□□ 0.1
SNX27-204ENST00000458013 ZNF833PQ6ZTB9 187 aa15.67■□□□□ 0.1
SNX27-204ENST00000458013 NPYP01303 97 aa15.67■□□□□ 0.1
SNX27-204ENST00000458013 ZNF524Q96C55 264 aa15.67■□□□□ 0.1
SNX27-204ENST00000458013 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.67■□□□□ 0.1
SNX27-204ENST00000458013 IGKV2-29A2NJV5 120 aaPredicted RBP15.67■□□□□ 0.1
SNX27-204ENST00000458013 LHBP01229 141 aa15.67■□□□□ 0.1
SNX27-204ENST00000458013 SIGLEC8Q9NYZ4 499 aa15.67■□□□□ 0.1
SNX27-204ENST00000458013 ANGP03950 147 aaKnown RBP15.66■□□□□ 0.1
SNX27-204ENST00000458013 LINC01559Q495D7 138 aa15.66■□□□□ 0.1
SNX27-204ENST00000458013 PHF3Q92576 2039 aaKnown RBP15.66■□□□□ 0.1
SNX27-204ENST00000458013 XCL1P47992 114 aa15.66■□□□□ 0.1
SNX27-204ENST00000458013 UBE2E1P51965 193 aa15.66■□□□□ 0.1
SNX27-204ENST00000458013 CABIN1Q9Y6J0 2220 aa15.66■□□□□ 0.1
SNX27-204ENST00000458013 DKK2Q9UBU2 259 aa15.66■□□□□ 0.1
SNX27-204ENST00000458013 TMEM243Q9BU79 118 aa15.66■□□□□ 0.1
SNX27-204ENST00000458013 A8MWP6 167 aa15.65■□□□□ 0.1
SNX27-204ENST00000458013 ZNF134P52741 427 aa15.65■□□□□ 0.1
SNX27-204ENST00000458013 TICRRQ7Z2Z1 1910 aa15.65■□□□□ 0.1
SNX27-204ENST00000458013 IGKV1OR2-108A0A075B7D4 117 aa15.65■□□□□ 0.1
SNX27-204ENST00000458013 IGHV2-70DA0A0C4DH43 119 aa15.65■□□□□ 0.1
SNX27-204ENST00000458013 TMEM141Q96I45 108 aa15.65■□□□□ 0.1
SNX27-204ENST00000458013 Q6ZVH6 145 aa15.65■□□□□ 0.1
SNX27-204ENST00000458013 C17orf82Q86X59 251 aaPredicted RBP15.65■□□□□ 0.1
SNX27-204ENST00000458013 KLF5Q13887 457 aaPredicted RBP15.65■□□□□ 0.1
SNX27-204ENST00000458013 NOP10Q9NPE3 64 aaKnown RBP15.65■□□□□ 0.1
SNX27-204ENST00000458013 MRPL35Q9NZE8 188 aaKnown RBP15.65■□□□□ 0.1
SNX27-204ENST00000458013 V9GYV3 84 aa15.65■□□□□ 0.1
SNX27-204ENST00000458013 IGHG3P01860 377 aa15.64■□□□□ 0.09
SNX27-204ENST00000458013 Q9HAA7 133 aa15.64■□□□□ 0.09
SNX27-204ENST00000458013 TRPM7Q96QT4 1865 aa15.64■□□□□ 0.09
SNX27-204ENST00000458013 CEND1Q8N111 149 aa15.64■□□□□ 0.09
SNX27-204ENST00000458013 CRYGCP07315 174 aa15.64■□□□□ 0.09
SNX27-204ENST00000458013 Q6ZS92 163 aa15.64■□□□□ 0.09
SNX27-204ENST00000458013 C9orf118A6NHY6 69 aa15.64■□□□□ 0.09
SNX27-204ENST00000458013 TAL2Q16559 108 aa15.64■□□□□ 0.09
SNX27-204ENST00000458013 MYLKQ15746 1914 aa15.63■□□□□ 0.09
SNX27-204ENST00000458013 H3BRN7 92 aa15.63■□□□□ 0.09
SNX27-204ENST00000458013 FANCMQ8IYD8 2048 aa15.63■□□□□ 0.09
SNX27-204ENST00000458013 CITED1Q99966 193 aa15.63■□□□□ 0.09
SNX27-204ENST00000458013 CR1LQ2VPA4 569 aa15.63■□□□□ 0.09
SNX27-204ENST00000458013 APRG1Q8IVJ8 170 aa15.62■□□□□ 0.09
SNX27-204ENST00000458013 CARD19Q96LW7 228 aa15.62■□□□□ 0.09
SNX27-204ENST00000458013 IGHV4-28A0A0C4DH34 117 aa15.62■□□□□ 0.09
SNX27-204ENST00000458013 SMIM27A0A1W2PRY6 76 aa15.62■□□□□ 0.09
SNX27-204ENST00000458013 NDUFA12Q9UI09 145 aa15.62■□□□□ 0.09
SNX27-204ENST00000458013 H3BMG7 143 aa15.62■□□□□ 0.09
SNX27-204ENST00000458013 SBF1O95248 1867 aa15.62■□□□□ 0.09
SNX27-204ENST00000458013 SPRNQ5BIV9 151 aa15.62■□□□□ 0.09
SNX27-204ENST00000458013 AMTNQ6UX39 209 aa15.62■□□□□ 0.09
SNX27-204ENST00000458013 ICE1Q9Y2F5 2266 aa15.62■□□□□ 0.09
SNX27-204ENST00000458013 FOXE3Q13461 319 aa15.62■□□□□ 0.09
SNX27-204ENST00000458013 ALPK2Q86TB3 2170 aa15.62■□□□□ 0.09
SNX27-204ENST00000458013 IGLL1P15814 213 aa15.61■□□□□ 0.09
SNX27-204ENST00000458013 CDKN1BP46527 198 aa15.61■□□□□ 0.09
SNX27-204ENST00000458013 Q0VG73 95 aa15.61■□□□□ 0.09
SNX27-204ENST00000458013 ZNF492Q9P255 531 aa15.61■□□□□ 0.09
SNX27-204ENST00000458013 ZNF318Q5VUA4 2279 aa15.61■□□□□ 0.09
SNX27-204ENST00000458013 WT1-ASQ06250 92 aa15.61■□□□□ 0.09
SNX27-204ENST00000458013 CFHR4Q92496 578 aa15.61■□□□□ 0.09
SNX27-204ENST00000458013 DSCR8Q96T75 97 aa15.61■□□□□ 0.09
SNX27-204ENST00000458013 IGKV2D-24A0A075B6R9 120 aa15.6■□□□□ 0.09
SNX27-204ENST00000458013 C15orf53Q8NAA6 179 aa15.6■□□□□ 0.09
SNX27-204ENST00000458013 PRR25Q96S07 402 aa15.6■□□□□ 0.09
SNX27-204ENST00000458013 K7EN84 100 aa15.6■□□□□ 0.09
SNX27-204ENST00000458013 PDE6HQ13956 83 aa15.6■□□□□ 0.09
SNX27-204ENST00000458013 KMT2EQ8IZD2 1858 aa15.6■□□□□ 0.09
SNX27-204ENST00000458013 IGHG4P01861 327 aa15.6■□□□□ 0.09
SNX27-204ENST00000458013 FOXL2NBQ6ZUU3 175 aa15.6■□□□□ 0.09
SNX27-204ENST00000458013 ESM1Q9NQ30 184 aa15.6■□□□□ 0.09
SNX27-204ENST00000458013 LOXP28300 417 aaPredicted RBP15.59■□□□□ 0.09
SNX27-204ENST00000458013 RPL18AQ02543 176 aaKnown RBP15.59■□□□□ 0.09
SNX27-204ENST00000458013 ETDBQ3ZM63 59 aa15.59■□□□□ 0.09
SNX27-204ENST00000458013 PROK2Q9HC23 129 aa15.59■□□□□ 0.09
SNX27-204ENST00000458013 GATA1P15976 413 aaPredicted RBP15.59■□□□□ 0.09
SNX27-204ENST00000458013 CLPSL1A2RUU4 121 aa15.59■□□□□ 0.09
SNX27-204ENST00000458013 BVES-AS1Q5T3Y7 98 aa15.58■□□□□ 0.08
SNX27-204ENST00000458013 NDUFS7O75251 213 aa15.58■□□□□ 0.08
SNX27-204ENST00000458013 GRNP28799 593 aaKnown RBP15.58■□□□□ 0.08
SNX27-204ENST00000458013 CDPF1Q6NVV7 123 aa15.57■□□□□ 0.08
SNX27-204ENST00000458013 IGLC2P0DOY2 106 aa15.57■□□□□ 0.08
SNX27-204ENST00000458013 IGLC3P0DOY3 106 aa15.57■□□□□ 0.08
SNX27-204ENST00000458013 Q6ZS49 121 aa15.57■□□□□ 0.08
SNX27-204ENST00000458013 HELZP42694 1942 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms