RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 TCRAP04437 139 aa10.46□□□□□ -0.73
HMGXB4-204ENST00000455359 LEPP41159 167 aa10.46□□□□□ -0.73
HMGXB4-204ENST00000455359 CCDC28AQ8IWP9 274 aa10.46□□□□□ -0.73
HMGXB4-204ENST00000455359 ZNF680Q8NEM1 530 aa10.46□□□□□ -0.73
HMGXB4-204ENST00000455359 LYPD6BQ8NI32 183 aa10.46□□□□□ -0.73
HMGXB4-204ENST00000455359 ATG101Q9BSB4 218 aa10.46□□□□□ -0.73
HMGXB4-204ENST00000455359 AGPAT4-IT1Q9H0P7 198 aa10.46□□□□□ -0.73
HMGXB4-204ENST00000455359 IGKV2-40A0A087WW87 121 aaPredicted RBP10.45□□□□□ -0.74
HMGXB4-204ENST00000455359 SPRY2O43597 315 aa10.45□□□□□ -0.74
HMGXB4-204ENST00000455359 PAGE4O60829 102 aa10.45□□□□□ -0.74
HMGXB4-204ENST00000455359 IGKV2D-40P01614 121 aaPredicted RBP10.45□□□□□ -0.74
HMGXB4-204ENST00000455359 CT45A10P0DMU9 189 aa10.45□□□□□ -0.74
HMGXB4-204ENST00000455359 CDKN1BP46527 198 aa10.45□□□□□ -0.74
HMGXB4-204ENST00000455359 ZNF138P52744 262 aa10.45□□□□□ -0.74
HMGXB4-204ENST00000455359 UBE2G2P60604 165 aa10.45□□□□□ -0.74
HMGXB4-204ENST00000455359 CST9LP1Q5W188 147 aa10.45□□□□□ -0.74
HMGXB4-204ENST00000455359 CYB561D1Q8N8Q1 229 aa10.45□□□□□ -0.74
HMGXB4-204ENST00000455359 SLC35B3Q9H1N7 401 aa10.45□□□□□ -0.74
HMGXB4-204ENST00000455359 DNAH9Q9NYC9 4486 aa10.45□□□□□ -0.74
HMGXB4-204ENST00000455359 STAB2Q8WWQ8 2551 aa10.44□□□□□ -0.74
HMGXB4-204ENST00000455359 A0A1B0GV50 99 aa10.44□□□□□ -0.74
HMGXB4-204ENST00000455359 CRISP2P16562 243 aa10.44□□□□□ -0.74
HMGXB4-204ENST00000455359 CCL20P78556 96 aa10.44□□□□□ -0.74
HMGXB4-204ENST00000455359 DEFB135Q30KP9 77 aa10.44□□□□□ -0.74
HMGXB4-204ENST00000455359 GOLT1AQ6ZVE7 132 aa10.44□□□□□ -0.74
HMGXB4-204ENST00000455359 CSNK1G2-AS1Q8NCQ2 148 aa10.44□□□□□ -0.74
HMGXB4-204ENST00000455359 FAM19A4Q96LR4 140 aa10.44□□□□□ -0.74
HMGXB4-204ENST00000455359 IGF2BP2-AS1Q96M15 143 aa10.44□□□□□ -0.74
HMGXB4-204ENST00000455359 VGLL1Q99990 258 aa10.44□□□□□ -0.74
HMGXB4-204ENST00000455359 C20orf144Q9BQM9 153 aa10.44□□□□□ -0.74
HMGXB4-204ENST00000455359 ZNF492Q9P255 531 aa10.44□□□□□ -0.74
HMGXB4-204ENST00000455359 GNG13Q9P2W3 67 aa10.44□□□□□ -0.74
HMGXB4-204ENST00000455359 XCL2Q9UBD3 114 aa10.44□□□□□ -0.74
HMGXB4-204ENST00000455359 PEX7O00628 323 aa10.43□□□□□ -0.74
HMGXB4-204ENST00000455359 INSP01308 110 aa10.43□□□□□ -0.74
HMGXB4-204ENST00000455359 ERCC8Q13216 396 aa10.43□□□□□ -0.74
HMGXB4-204ENST00000455359 TMEM75Q8N9X5 138 aa10.43□□□□□ -0.74
HMGXB4-204ENST00000455359 OVOL2Q9BRP0 275 aa10.43□□□□□ -0.74
HMGXB4-204ENST00000455359 GOLT1BQ9Y3E0 138 aa10.43□□□□□ -0.74
HMGXB4-204ENST00000455359 C11orf94C9JXX5 98 aa10.42□□□□□ -0.74
HMGXB4-204ENST00000455359 CRXO43186 299 aaPredicted RBP10.42□□□□□ -0.74
HMGXB4-204ENST00000455359 S100A9P06702 114 aaKnown RBP10.42□□□□□ -0.74
HMGXB4-204ENST00000455359 GNG5P63218 68 aa10.42□□□□□ -0.74
HMGXB4-204ENST00000455359 SPINK13Q1W4C9 94 aa10.42□□□□□ -0.74
HMGXB4-204ENST00000455359 TMEM256Q8N2U0 113 aa10.42□□□□□ -0.74
HMGXB4-204ENST00000455359 RPH3ALQ9UNE2 315 aa10.42□□□□□ -0.74
HMGXB4-204ENST00000455359 TRBV6-1A0A0K0K1D8 114 aa10.41□□□□□ -0.74
HMGXB4-204ENST00000455359 SMIM9A6NGZ8 99 aa10.41□□□□□ -0.74
HMGXB4-204ENST00000455359 KLLNB2CW77 178 aa10.41□□□□□ -0.74
HMGXB4-204ENST00000455359 M0R2Z0 102 aa10.41□□□□□ -0.74
HMGXB4-204ENST00000455359 BCL2P10415 239 aa10.41□□□□□ -0.74
HMGXB4-204ENST00000455359 ATP5G3P48201 142 aa10.41□□□□□ -0.74
HMGXB4-204ENST00000455359 ZNF705AQ6ZN79 300 aaPredicted RBP10.41□□□□□ -0.74
HMGXB4-204ENST00000455359 NEU1Q99519 415 aa10.41□□□□□ -0.74
HMGXB4-204ENST00000455359 NDFIP1Q9BT67 221 aa10.41□□□□□ -0.74
HMGXB4-204ENST00000455359 VAX2Q9UIW0 290 aa10.41□□□□□ -0.74
HMGXB4-204ENST00000455359 KLF12Q9Y4X4 402 aa10.41□□□□□ -0.74
HMGXB4-204ENST00000455359 PDE6DO43924 150 aa10.4□□□□□ -0.74
HMGXB4-204ENST00000455359 FXYD7P58549 80 aa10.4□□□□□ -0.74
HMGXB4-204ENST00000455359 MEF2BQ02080 365 aaPredicted RBP10.4□□□□□ -0.74
HMGXB4-204ENST00000455359 SAPCD1Q5SSQ6 148 aa10.4□□□□□ -0.74
HMGXB4-204ENST00000455359 ZNF767PQ75MW2 155 aa10.4□□□□□ -0.74
HMGXB4-204ENST00000455359 OR11H2Q8NH07 326 aa10.4□□□□□ -0.74
HMGXB4-204ENST00000455359 RARRES2Q99969 163 aa10.4□□□□□ -0.74
HMGXB4-204ENST00000455359 PSG8Q9UQ74 426 aa10.4□□□□□ -0.74
HMGXB4-204ENST00000455359 U3KQK5 164 aa10.4□□□□□ -0.74
HMGXB4-204ENST00000455359 AGRNO00468 2067 aa10.4□□□□□ -0.74
HMGXB4-204ENST00000455359 TGP01266 2768 aa10.4□□□□□ -0.74
HMGXB4-204ENST00000455359 H7BYZ3 331 aa10.39□□□□□ -0.75
HMGXB4-204ENST00000455359 NDUFS6O75380 124 aaKnown RBP10.39□□□□□ -0.75
HMGXB4-204ENST00000455359 IGLV2-11P01706 119 aa10.39□□□□□ -0.75
HMGXB4-204ENST00000455359 GPX1P07203 203 aa10.39□□□□□ -0.75
HMGXB4-204ENST00000455359 PRB4P10163 310 aaPredicted RBP10.39□□□□□ -0.75
HMGXB4-204ENST00000455359 MIFP14174 115 aa10.39□□□□□ -0.75
HMGXB4-204ENST00000455359 FLI1Q01543 452 aaPredicted RBP10.39□□□□□ -0.75
HMGXB4-204ENST00000455359 GFI1BQ5VTD9 330 aa10.39□□□□□ -0.75
HMGXB4-204ENST00000455359 ZFAND2AQ8N6M9 145 aa10.39□□□□□ -0.75
HMGXB4-204ENST00000455359 C11orf52Q96A22 123 aa10.39□□□□□ -0.75
HMGXB4-204ENST00000455359 FMC1Q96HJ9 113 aa10.39□□□□□ -0.75
HMGXB4-204ENST00000455359 ZFP30Q9Y2G7 519 aa10.39□□□□□ -0.75
HMGXB4-204ENST00000455359 TRAV12-2A0A075B6T6 113 aa10.38□□□□□ -0.75
HMGXB4-204ENST00000455359 TRAV8-1A0A0A6YYK1 113 aa10.38□□□□□ -0.75
HMGXB4-204ENST00000455359 C7orf71A4D174 169 aa10.38□□□□□ -0.75
HMGXB4-204ENST00000455359 RAB14P61106 215 aa10.38□□□□□ -0.75
HMGXB4-204ENST00000455359 C1orf158Q8N1D5 194 aa10.38□□□□□ -0.75
HMGXB4-204ENST00000455359 Q8TAT8 98 aa10.38□□□□□ -0.75
HMGXB4-204ENST00000455359 NIPSNAP3BQ9BS92 247 aa10.38□□□□□ -0.75
HMGXB4-204ENST00000455359 TMEM208Q9BTX3 173 aa10.38□□□□□ -0.75
HMGXB4-204ENST00000455359 RETNQ9HD89 108 aa10.38□□□□□ -0.75
HMGXB4-204ENST00000455359 TREM1Q9NP99 234 aa10.38□□□□□ -0.75
HMGXB4-204ENST00000455359 TENM3Q9P273 2699 aa10.37□□□□□ -0.75
HMGXB4-204ENST00000455359 LOC102723971A0A1B0GUV8 181 aa10.37□□□□□ -0.75
HMGXB4-204ENST00000455359 AKR1C3P42330 323 aa10.37□□□□□ -0.75
HMGXB4-204ENST00000455359 TAS2R60P59551 318 aa10.37□□□□□ -0.75
HMGXB4-204ENST00000455359 UBE2G1P62253 170 aa10.37□□□□□ -0.75
HMGXB4-204ENST00000455359 TMEM183BQ1AE95 376 aa10.37□□□□□ -0.75
HMGXB4-204ENST00000455359 C2CD4CQ8TF44 421 aa10.37□□□□□ -0.75
HMGXB4-204ENST00000455359 HUWE1Q7Z6Z7 4374 aaKnown RBP10.36□□□□□ -0.75
HMGXB4-204ENST00000455359 RBFOX3A6NFN3 312 aa10.36□□□□□ -0.75
HMGXB4-204ENST00000455359 RNASE4P34096 147 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms