RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 SPATA12Q7Z6I5 190 aa11.03□□□□□ -0.64
GPC1-206ENST00000455111 ZFAND2AQ8N6M9 145 aa11.03□□□□□ -0.64
GPC1-206ENST00000455111 OR1L4Q8NGR5 311 aa11.03□□□□□ -0.64
GPC1-206ENST00000455111 MRPL53Q96EL3 112 aaKnown RBP11.03□□□□□ -0.64
GPC1-206ENST00000455111 PYGO2Q9BRQ0 406 aa11.03□□□□□ -0.64
GPC1-206ENST00000455111 MRPS16Q9Y3D3 137 aaKnown RBP11.03□□□□□ -0.64
GPC1-206ENST00000455111 C7orf71A4D174 169 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 H0YIZ8 118 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 H3BNG1 76 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 H2AFB2P0C5Z0 115 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 FGF7P21781 194 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 S100A10P60903 97 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 NHLH2Q02577 135 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 BAXQ07812 192 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 CCDC28AQ8IWP9 274 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 C18orf15Q96N68 181 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 PFDN5Q99471 154 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 VGLL1Q99990 258 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 LINC00467Q9BRT7 94 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 NPCDR1Q9BY65 106 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 FAT1Q14517 4588 aa11.02□□□□□ -0.65
GPC1-206ENST00000455111 IGKV2-40A0A087WW87 121 aaPredicted RBP11.01□□□□□ -0.65
GPC1-206ENST00000455111 SNURFLB1AK76 121 aa11.01□□□□□ -0.65
GPC1-206ENST00000455111 SPINK4O60575 86 aa11.01□□□□□ -0.65
GPC1-206ENST00000455111 IGKV2D-40P01614 121 aaPredicted RBP11.01□□□□□ -0.65
GPC1-206ENST00000455111 SLC25A5P05141 298 aaKnown RBP11.01□□□□□ -0.65
GPC1-206ENST00000455111 HIST1H1EP10412 219 aaKnown RBP11.01□□□□□ -0.65
GPC1-206ENST00000455111 CRISP2P16562 243 aa11.01□□□□□ -0.65
GPC1-206ENST00000455111 S100A11P31949 105 aa11.01□□□□□ -0.65
GPC1-206ENST00000455111 MIR17HGQ75NE6 70 aa11.01□□□□□ -0.65
GPC1-206ENST00000455111 SIX6O95475 246 aa11□□□□□ -0.65
GPC1-206ENST00000455111 ANXA2RQ3ZCQ2 193 aa11□□□□□ -0.65
GPC1-206ENST00000455111 C9orf47Q6ZRZ4 202 aa11□□□□□ -0.65
GPC1-206ENST00000455111 MAPKAPK5-AS1Q8N8E1 139 aa11□□□□□ -0.65
GPC1-206ENST00000455111 BLNKQ8WV28 456 aa11□□□□□ -0.65
GPC1-206ENST00000455111 OR5AC2Q9NZP5 309 aa11□□□□□ -0.65
GPC1-206ENST00000455111 FUSP35637 526 aaKnown RBP eCLIP10.99□□□□□ -0.65
GPC1-206ENST00000455111 RAB31Q13636 194 aa10.99□□□□□ -0.65
GPC1-206ENST00000455111 THAP6Q8TBB0 222 aa10.99□□□□□ -0.65
GPC1-206ENST00000455111 FXYD5Q96DB9 178 aa10.99□□□□□ -0.65
GPC1-206ENST00000455111 GPN1Q9HCN4 374 aaPredicted RBP10.99□□□□□ -0.65
GPC1-206ENST00000455111 RNASE4P34096 147 aaKnown RBP10.98□□□□□ -0.65
GPC1-206ENST00000455111 TCL1AP56279 114 aa10.98□□□□□ -0.65
GPC1-206ENST00000455111 IFITM3Q01628 133 aa10.98□□□□□ -0.65
GPC1-206ENST00000455111 PDE6HQ13956 83 aa10.98□□□□□ -0.65
GPC1-206ENST00000455111 ICAM4Q14773 271 aa10.98□□□□□ -0.65
GPC1-206ENST00000455111 FAM122CQ6P4D5 195 aa10.98□□□□□ -0.65
GPC1-206ENST00000455111 EIF4E3Q8N5X7 224 aaKnown RBP10.98□□□□□ -0.65
GPC1-206ENST00000455111 PHYHIPLQ96FC7 376 aa10.98□□□□□ -0.65
GPC1-206ENST00000455111 LINC00477Q96M19 166 aa10.98□□□□□ -0.65
GPC1-206ENST00000455111 FUT9Q9Y231 359 aa10.98□□□□□ -0.65
GPC1-206ENST00000455111 TNFRSF18Q9Y5U5 241 aa10.98□□□□□ -0.65
GPC1-206ENST00000455111 TRGV1A0A0A0MS02 117 aa10.97□□□□□ -0.65
GPC1-206ENST00000455111 BTF3P20290 206 aaKnown RBP10.97□□□□□ -0.65
GPC1-206ENST00000455111 PVALBP20472 110 aaPredicted RBP10.97□□□□□ -0.65
GPC1-206ENST00000455111 LINC00315P59091 139 aa10.97□□□□□ -0.65
GPC1-206ENST00000455111 ATP6V1FQ16864 119 aa10.97□□□□□ -0.65
GPC1-206ENST00000455111 OR5C1Q8NGR4 320 aa10.97□□□□□ -0.65
GPC1-206ENST00000455111 Q8TAT8 98 aa10.97□□□□□ -0.65
GPC1-206ENST00000455111 CCDC32Q9BV29 185 aa10.97□□□□□ -0.65
GPC1-206ENST00000455111 MRPL16Q9NX20 251 aaKnown RBP10.97□□□□□ -0.65
GPC1-206ENST00000455111 ZNF492Q9P255 531 aa10.97□□□□□ -0.65
GPC1-206ENST00000455111 A0A1W2PPQ1 181 aa10.96□□□□□ -0.65
GPC1-206ENST00000455111 EIF3GO75821 320 aaKnown RBP eCLIP10.96□□□□□ -0.65
GPC1-206ENST00000455111 IGHV3-53P01767 116 aa10.96□□□□□ -0.65
GPC1-206ENST00000455111 STX12Q86Y82 276 aa10.96□□□□□ -0.65
GPC1-206ENST00000455111 Q8N1X5 172 aa10.96□□□□□ -0.65
GPC1-206ENST00000455111 ZNF680Q8NEM1 530 aa10.96□□□□□ -0.65
GPC1-206ENST00000455111 PRELID1Q9Y255 219 aa10.96□□□□□ -0.65
GPC1-206ENST00000455111 TIMM9Q9Y5J7 89 aa10.96□□□□□ -0.65
GPC1-206ENST00000455111 FAM240BA0A1B0GVZ2 78 aa10.95□□□□□ -0.66
GPC1-206ENST00000455111 MPDU1O75352 247 aa10.95□□□□□ -0.66
GPC1-206ENST00000455111 OR10J4P0C629 311 aa10.95□□□□□ -0.66
GPC1-206ENST00000455111 HBG1P69891 147 aa10.95□□□□□ -0.66
GPC1-206ENST00000455111 HBG2P69892 147 aa10.95□□□□□ -0.66
GPC1-206ENST00000455111 ASAH1Q13510 395 aa10.95□□□□□ -0.66
GPC1-206ENST00000455111 FHL2Q14192 279 aa10.95□□□□□ -0.66
GPC1-206ENST00000455111 TTC32Q5I0X7 151 aa10.95□□□□□ -0.66
GPC1-206ENST00000455111 WDR61Q9GZS3 305 aaKnown RBP10.95□□□□□ -0.66
GPC1-206ENST00000455111 HERC1Q15751 4861 aa10.94□□□□□ -0.66
GPC1-206ENST00000455111 TRGV2A0A075B6R0 118 aa10.94□□□□□ -0.66
GPC1-206ENST00000455111 GPX1P07203 203 aa10.94□□□□□ -0.66
GPC1-206ENST00000455111 NBEAP1P0C6P0 100 aa10.94□□□□□ -0.66
GPC1-206ENST00000455111 IBA57Q5T440 356 aaKnown RBP10.94□□□□□ -0.66
GPC1-206ENST00000455111 ST6GAL2Q96JF0 529 aa10.94□□□□□ -0.66
GPC1-206ENST00000455111 OR51M1Q9H341 326 aa10.94□□□□□ -0.66
GPC1-206ENST00000455111 DNAH8Q96JB1 4490 aa10.94□□□□□ -0.66
GPC1-206ENST00000455111 IGHV1OR15-1A0A075B7D0 117 aa10.93□□□□□ -0.66
GPC1-206ENST00000455111 NMBP08949 121 aa10.93□□□□□ -0.66
GPC1-206ENST00000455111 CRYBA4P53673 196 aa10.93□□□□□ -0.66
GPC1-206ENST00000455111 MDFICQ9P1T7 246 aa10.93□□□□□ -0.66
GPC1-206ENST00000455111 H2BFSP57053 126 aa10.92□□□□□ -0.66
GPC1-206ENST00000455111 LRRC37A5PQ49AS3 106 aa10.92□□□□□ -0.66
GPC1-206ENST00000455111 LYPD5Q6UWN5 251 aa10.92□□□□□ -0.66
GPC1-206ENST00000455111 PAXXQ9BUH6 204 aa10.92□□□□□ -0.66
GPC1-206ENST00000455111 NXPH4O95158 308 aa10.91□□□□□ -0.66
GPC1-206ENST00000455111 ZNF138P52744 262 aa10.91□□□□□ -0.66
GPC1-206ENST00000455111 MUC21Q5SSG8 566 aa10.91□□□□□ -0.66
GPC1-206ENST00000455111 TMEM78Q5T7P6 136 aa10.91□□□□□ -0.66
GPC1-206ENST00000455111 C8orf49Q96NF6 230 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms