RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 MLST8Q9BVC4 326 aa12.36□□□□□ -0.43
LINC00963-208ENST00000454968 TRAV8-1A0A0A6YYK1 113 aa12.35□□□□□ -0.43
LINC00963-208ENST00000454968 TRBV7-9A0A0J9YWB2 115 aa12.35□□□□□ -0.43
LINC00963-208ENST00000454968 DEFB1P60022 68 aa12.35□□□□□ -0.43
LINC00963-208ENST00000454968 FLI1Q01543 452 aaPredicted RBP12.35□□□□□ -0.43
LINC00963-208ENST00000454968 GDF5OSQ5U4N7 250 aa12.35□□□□□ -0.43
LINC00963-208ENST00000454968 Q86TA4 180 aa12.35□□□□□ -0.43
LINC00963-208ENST00000454968 LINC00477Q96M19 166 aa12.35□□□□□ -0.43
LINC00963-208ENST00000454968 AGPAT4-IT1Q9H0P7 198 aa12.35□□□□□ -0.43
LINC00963-208ENST00000454968 PSG8Q9UQ74 426 aa12.35□□□□□ -0.43
LINC00963-208ENST00000454968 LENEPQ9Y5L5 61 aa12.35□□□□□ -0.43
LINC00963-208ENST00000454968 LY96Q9Y6Y9 160 aa12.35□□□□□ -0.43
LINC00963-208ENST00000454968 TRAV34A0A0B4J273 112 aa12.34□□□□□ -0.43
LINC00963-208ENST00000454968 ZNF727A8MUV8 499 aa12.34□□□□□ -0.43
LINC00963-208ENST00000454968 F6UB75 175 aa12.34□□□□□ -0.43
LINC00963-208ENST00000454968 IGLV2-8P01709 118 aa12.34□□□□□ -0.43
LINC00963-208ENST00000454968 CD7P09564 240 aa12.34□□□□□ -0.43
LINC00963-208ENST00000454968 HLA-DRB4P13762 266 aa12.34□□□□□ -0.43
LINC00963-208ENST00000454968 SAMD5Q5TGI4 173 aa12.34□□□□□ -0.43
LINC00963-208ENST00000454968 ODF3Q96PU9 254 aa12.34□□□□□ -0.43
LINC00963-208ENST00000454968 SMIM7Q9BQ49 75 aa12.34□□□□□ -0.43
LINC00963-208ENST00000454968 ZNF492Q9P255 531 aa12.34□□□□□ -0.43
LINC00963-208ENST00000454968 RPH3ALQ9UNE2 315 aa12.34□□□□□ -0.43
LINC00963-208ENST00000454968 HLA-DRB4X5D2U9 266 aa12.34□□□□□ -0.43
LINC00963-208ENST00000454968 OR11H12B2RN74 326 aa12.33□□□□□ -0.44
LINC00963-208ENST00000454968 OXLD1Q5BKU9 147 aa12.33□□□□□ -0.44
LINC00963-208ENST00000454968 OR10J6PQ8NGY7 276 aa12.33□□□□□ -0.44
LINC00963-208ENST00000454968 TVP23CQ96ET8 276 aa12.33□□□□□ -0.44
LINC00963-208ENST00000454968 ZFP30Q9Y2G7 519 aa12.33□□□□□ -0.44
LINC00963-208ENST00000454968 F8W036 122 aa12.32□□□□□ -0.44
LINC00963-208ENST00000454968 H3BMM0 161 aa12.32□□□□□ -0.44
LINC00963-208ENST00000454968 NOTCH1P46531 2555 aa12.32□□□□□ -0.44
LINC00963-208ENST00000454968 ZNF138P52744 262 aa12.32□□□□□ -0.44
LINC00963-208ENST00000454968 UBE2G1P62253 170 aa12.32□□□□□ -0.44
LINC00963-208ENST00000454968 ERCC8Q13216 396 aa12.32□□□□□ -0.44
LINC00963-208ENST00000454968 CENPWQ5EE01 88 aa12.32□□□□□ -0.44
LINC00963-208ENST00000454968 APRG1Q8IVJ8 170 aa12.32□□□□□ -0.44
LINC00963-208ENST00000454968 Q8N1Y9 231 aa12.32□□□□□ -0.44
LINC00963-208ENST00000454968 PRR25Q96S07 402 aa12.32□□□□□ -0.44
LINC00963-208ENST00000454968 SDF2L1Q9HCN8 221 aa12.32□□□□□ -0.44
LINC00963-208ENST00000454968 DUSP14O95147 198 aaKnown RBP12.31□□□□□ -0.44
LINC00963-208ENST00000454968 CT45A10P0DMU9 189 aa12.31□□□□□ -0.44
LINC00963-208ENST00000454968 PRB4P10163 310 aaPredicted RBP12.31□□□□□ -0.44
LINC00963-208ENST00000454968 CRISP2P16562 243 aa12.31□□□□□ -0.44
LINC00963-208ENST00000454968 CEBPGP53567 150 aa12.31□□□□□ -0.44
LINC00963-208ENST00000454968 EBLN2Q6P2I7 272 aa12.31□□□□□ -0.44
LINC00963-208ENST00000454968 AMTNQ6UX39 209 aa12.31□□□□□ -0.44
LINC00963-208ENST00000454968 TMEM183AQ8IXX5 376 aa12.31□□□□□ -0.44
LINC00963-208ENST00000454968 SGK494Q96LW2 274 aa12.31□□□□□ -0.44
LINC00963-208ENST00000454968 NAT8Q9UHE5 227 aa12.31□□□□□ -0.44
LINC00963-208ENST00000454968 ATP6V1G1O75348 118 aa12.3□□□□□ -0.44
LINC00963-208ENST00000454968 ZNF705DP0CH99 300 aaPredicted RBP12.3□□□□□ -0.44
LINC00963-208ENST00000454968 ZNF705BP0CI00 300 aaPredicted RBP12.3□□□□□ -0.44
LINC00963-208ENST00000454968 GNG4P50150 75 aa12.3□□□□□ -0.44
LINC00963-208ENST00000454968 HIST1H1AQ02539 215 aaPredicted RBP12.3□□□□□ -0.44
LINC00963-208ENST00000454968 ZNF124Q15973 351 aa12.3□□□□□ -0.44
LINC00963-208ENST00000454968 TMEM241Q24JQ0 296 aa12.3□□□□□ -0.44
LINC00963-208ENST00000454968 ZNF674Q2M3X9 581 aa12.3□□□□□ -0.44
LINC00963-208ENST00000454968 SAPCD1Q5SSQ6 148 aa12.3□□□□□ -0.44
LINC00963-208ENST00000454968 TMEM78Q5T7P6 136 aa12.3□□□□□ -0.44
LINC00963-208ENST00000454968 LINC01551Q86U37 167 aa12.3□□□□□ -0.44
LINC00963-208ENST00000454968 BAGE2Q86Y30 109 aa12.3□□□□□ -0.44
LINC00963-208ENST00000454968 NIPSNAP3BQ9BS92 247 aa12.3□□□□□ -0.44
LINC00963-208ENST00000454968 ZMAT5Q9UDW3 170 aaKnown RBP12.3□□□□□ -0.44
LINC00963-208ENST00000454968 PNRC1Q12796 327 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-208ENST00000454968 KPRPQ5T749 579 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-208ENST00000454968 PRNTQ86SH4 94 aa12.29□□□□□ -0.44
LINC00963-208ENST00000454968 OCC1Q8TAD7 63 aa12.29□□□□□ -0.44
LINC00963-208ENST00000454968 Q8TAT8 98 aa12.29□□□□□ -0.44
LINC00963-208ENST00000454968 KNCNA6PVL3 124 aa12.28□□□□□ -0.44
LINC00963-208ENST00000454968 K7EN84 100 aa12.28□□□□□ -0.44
LINC00963-208ENST00000454968 KRTAP10-11P60412 298 aa12.28□□□□□ -0.44
LINC00963-208ENST00000454968 RPL23P62829 140 aaKnown RBP12.28□□□□□ -0.44
LINC00963-208ENST00000454968 TRPT1Q86TN4 253 aaKnown RBP12.28□□□□□ -0.44
LINC00963-208ENST00000454968 GTSCR1Q86UQ5 136 aa12.28□□□□□ -0.44
LINC00963-208ENST00000454968 ZFAND2AQ8N6M9 145 aa12.28□□□□□ -0.44
LINC00963-208ENST00000454968 RBMY1BA6NDE4 496 aaKnown RBP12.28□□□□□ -0.44
LINC00963-208ENST00000454968 RBMY1EA6NEQ0 496 aaKnown RBP12.28□□□□□ -0.44
LINC00963-208ENST00000454968 PGPEP1LA6NFU8 196 aa12.28□□□□□ -0.44
LINC00963-208ENST00000454968 KLLNB2CW77 178 aa12.28□□□□□ -0.44
LINC00963-208ENST00000454968 G3V4G9 280 aa12.28□□□□□ -0.44
LINC00963-208ENST00000454968 GCGP01275 180 aa12.28□□□□□ -0.44
LINC00963-208ENST00000454968 RBMY1DP0C7P1 496 aaKnown RBP12.28□□□□□ -0.44
LINC00963-208ENST00000454968 ACTL10Q5JWF8 245 aa12.28□□□□□ -0.44
LINC00963-208ENST00000454968 WFDC10AQ9H1F0 79 aa12.27□□□□□ -0.45
LINC00963-208ENST00000454968 CRIP1P50238 77 aa12.26□□□□□ -0.45
LINC00963-208ENST00000454968 ZC2HC1AQ96GY0 325 aa12.26□□□□□ -0.45
LINC00963-208ENST00000454968 NDFIP1Q9BT67 221 aa12.26□□□□□ -0.45
LINC00963-208ENST00000454968 S100A1P23297 94 aa12.25□□□□□ -0.45
LINC00963-208ENST00000454968 ISOC2Q96AB3 205 aa12.25□□□□□ -0.45
LINC00963-208ENST00000454968 C8orf49Q96NF6 230 aa12.25□□□□□ -0.45
LINC00963-208ENST00000454968 ASCL2Q99929 193 aa12.25□□□□□ -0.45
LINC00963-208ENST00000454968 C19orf71A6NCJ1 209 aa12.24□□□□□ -0.45
LINC00963-208ENST00000454968 PRR9Q5T870 116 aa12.24□□□□□ -0.45
LINC00963-208ENST00000454968 LINC00322Q6ZN03 302 aaPredicted RBP12.24□□□□□ -0.45
LINC00963-208ENST00000454968 FAM231DQ6ZW35 169 aa12.24□□□□□ -0.45
LINC00963-208ENST00000454968 SVBPQ8N300 66 aa12.24□□□□□ -0.45
LINC00963-208ENST00000454968 NHLRC2Q8NBF2 726 aa12.24□□□□□ -0.45
LINC00963-208ENST00000454968 A8MZ25 164 aa12.23□□□□□ -0.45
LINC00963-208ENST00000454968 CRXO43186 299 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms