RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 A0A1B0GUT8 65 aa10.5□□□□□ -0.73
CLK3-203ENST00000454830 CRIP1P50238 77 aa10.5□□□□□ -0.73
CLK3-203ENST00000454830 CYB5R2Q6BCY4 276 aa10.5□□□□□ -0.73
CLK3-203ENST00000454830 RCHY1Q96PM5 261 aa10.5□□□□□ -0.73
CLK3-203ENST00000454830 J3QKU1 62 aa10.49□□□□□ -0.73
CLK3-203ENST00000454830 WFDC11Q8NEX6 87 aa10.49□□□□□ -0.73
CLK3-203ENST00000454830 HECTD1Q9ULT8 2610 aa10.49□□□□□ -0.73
CLK3-203ENST00000454830 A0A096LNT2 108 aa10.49□□□□□ -0.73
CLK3-203ENST00000454830 RIGQ13278 110 aa10.49□□□□□ -0.73
CLK3-203ENST00000454830 CT83Q5H943 113 aa10.49□□□□□ -0.73
CLK3-203ENST00000454830 CLEC5AQ9NY25 188 aa10.49□□□□□ -0.73
CLK3-203ENST00000454830 TP53TG3Q9ULZ0 132 aa10.49□□□□□ -0.73
CLK3-203ENST00000454830 VPREB3Q9UKI3 123 aa10.49□□□□□ -0.73
CLK3-203ENST00000454830 A0A1W2PS18 150 aa10.48□□□□□ -0.73
CLK3-203ENST00000454830 NDUFA4O00483 81 aa10.48□□□□□ -0.73
CLK3-203ENST00000454830 DEFB1P60022 68 aa10.48□□□□□ -0.73
CLK3-203ENST00000454830 FAM106AQ4KMX7 169 aa10.48□□□□□ -0.73
CLK3-203ENST00000454830 C1orf194Q5T5A4 169 aa10.48□□□□□ -0.73
CLK3-203ENST00000454830 ATP5L2Q7Z4Y8 100 aa10.48□□□□□ -0.73
CLK3-203ENST00000454830 NAGKQ9UJ70 344 aa10.48□□□□□ -0.73
CLK3-203ENST00000454830 BMI1P35226 326 aa10.48□□□□□ -0.73
CLK3-203ENST00000454830 JOSD1Q15040 202 aaPredicted RBP10.48□□□□□ -0.73
CLK3-203ENST00000454830 RHPN1-AS1Q9BWJ2 59 aa10.48□□□□□ -0.73
CLK3-203ENST00000454830 PEF1Q9UBV8 284 aaKnown RBP10.48□□□□□ -0.73
CLK3-203ENST00000454830 LINC00587B1AMM8 73 aa10.48□□□□□ -0.73
CLK3-203ENST00000454830 M0QZ24 198 aa10.48□□□□□ -0.73
CLK3-203ENST00000454830 GLMPQ8WWB7 406 aa10.48□□□□□ -0.73
CLK3-203ENST00000454830 NOTCH3Q9UM47 2321 aa10.48□□□□□ -0.73
CLK3-203ENST00000454830 RPLP1P05386 114 aaKnown RBP10.47□□□□□ -0.73
CLK3-203ENST00000454830 C19orf54Q5BKX5 351 aa10.47□□□□□ -0.73
CLK3-203ENST00000454830 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.47□□□□□ -0.73
CLK3-203ENST00000454830 RASL11AQ6T310 242 aa10.47□□□□□ -0.73
CLK3-203ENST00000454830 LYZL1Q6UWQ5 148 aa10.47□□□□□ -0.73
CLK3-203ENST00000454830 H3BUA1 57 aa10.47□□□□□ -0.73
CLK3-203ENST00000454830 ZNF80P51504 273 aaPredicted RBP10.47□□□□□ -0.73
CLK3-203ENST00000454830 CRIP2P52943 208 aaPredicted RBP10.47□□□□□ -0.73
CLK3-203ENST00000454830 PAFAH1B2P68402 229 aa10.47□□□□□ -0.73
CLK3-203ENST00000454830 C18orf32Q8TCD1 76 aa10.47□□□□□ -0.73
CLK3-203ENST00000454830 GFRA4Q9GZZ7 299 aa10.47□□□□□ -0.73
CLK3-203ENST00000454830 TSTD3H0UI37 97 aa10.46□□□□□ -0.73
CLK3-203ENST00000454830 IGHG4P01861 327 aa10.46□□□□□ -0.73
CLK3-203ENST00000454830 Q0VG73 95 aa10.46□□□□□ -0.73
CLK3-203ENST00000454830 AGPAT4-IT1Q9H0P7 198 aa10.46□□□□□ -0.73
CLK3-203ENST00000454830 FABP5P3A8MUU1 101 aa10.46□□□□□ -0.74
CLK3-203ENST00000454830 A8MWP6 167 aa10.46□□□□□ -0.74
CLK3-203ENST00000454830 HIST1H1AQ02539 215 aaPredicted RBP10.46□□□□□ -0.74
CLK3-203ENST00000454830 TWIST1Q15672 202 aa10.46□□□□□ -0.74
CLK3-203ENST00000454830 OR10J3Q5JRS4 329 aa10.46□□□□□ -0.74
CLK3-203ENST00000454830 C16orf54Q6UWD8 224 aa10.46□□□□□ -0.74
CLK3-203ENST00000454830 WIPF2Q8TF74 440 aaPredicted RBP10.46□□□□□ -0.74
CLK3-203ENST00000454830 MXRA5Q9NR99 2828 aa10.46□□□□□ -0.74
CLK3-203ENST00000454830 TRBV6-1A0A0K0K1D8 114 aa10.45□□□□□ -0.74
CLK3-203ENST00000454830 DAZ1Q9NQZ3 744 aaKnown RBP10.45□□□□□ -0.74
CLK3-203ENST00000454830 TMEM213A2RRL7 107 aa10.45□□□□□ -0.74
CLK3-203ENST00000454830 NPIPB6E9PJ23 425 aa10.45□□□□□ -0.74
CLK3-203ENST00000454830 KCNS1Q96KK3 526 aa10.45□□□□□ -0.74
CLK3-203ENST00000454830 M0R2Z0 102 aa10.45□□□□□ -0.74
CLK3-203ENST00000454830 EDN2P20800 178 aa10.45□□□□□ -0.74
CLK3-203ENST00000454830 LINC00310P59036 64 aa10.45□□□□□ -0.74
CLK3-203ENST00000454830 TMEM190Q8WZ59 177 aa10.45□□□□□ -0.74
CLK3-203ENST00000454830 ITPR2Q14571 2701 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 A0A087X0K7 114 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 A0A1B0GXF2 115 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 FAM181BA6NEQ2 426 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 IGLV1-40P01703 118 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 LRRC75A-AS1Q8N1F1 130 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 FER1L6-AS1Q8NA97 138 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 OR10J6PQ8NGY7 276 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 WFDC12Q8WWY7 111 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 ALKBH7Q9BT30 221 aaPredicted RBP10.44□□□□□ -0.74
CLK3-203ENST00000454830 TRAV8-2A0A0B4J237 113 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 F6UB75 175 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 ZNF138P52744 262 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 PMCHL1Q16048 86 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 CR1P17927 2039 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 TENM4Q6N022 2769 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 FAM231BA6NCW3 169 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 HIST2H2BDQ6DRA6 164 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 Q6YL49 198 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 C9orf139Q6ZV77 190 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 Q6ZWC4 215 aa10.44□□□□□ -0.74
CLK3-203ENST00000454830 FBLL1A6NHQ2 334 aaKnown RBP10.43□□□□□ -0.74
CLK3-203ENST00000454830 PLA2G2AP14555 144 aa10.43□□□□□ -0.74
CLK3-203ENST00000454830 SYNJ2BPP57105 145 aa10.43□□□□□ -0.74
CLK3-203ENST00000454830 FAM209BQ5JX69 171 aa10.43□□□□□ -0.74
CLK3-203ENST00000454830 NRN1Q9NPD7 142 aa10.43□□□□□ -0.74
CLK3-203ENST00000454830 ZNF324O75467 553 aaPredicted RBP10.43□□□□□ -0.74
CLK3-203ENST00000454830 KLK9Q2XQG4 91 aa10.43□□□□□ -0.74
CLK3-203ENST00000454830 C11orf44Q8N8P7 122 aa10.43□□□□□ -0.74
CLK3-203ENST00000454830 KLK9Q9UKQ9 250 aa10.43□□□□□ -0.74
CLK3-203ENST00000454830 IGHV7-4-1A0A0J9YVY3 117 aa10.43□□□□□ -0.74
CLK3-203ENST00000454830 LOC389332A0A1B0GUA5 103 aa10.43□□□□□ -0.74
CLK3-203ENST00000454830 H0Y8G0 127 aa10.43□□□□□ -0.74
CLK3-203ENST00000454830 GPX1P07203 203 aa10.43□□□□□ -0.74
CLK3-203ENST00000454830 PPP1R14DQ9NXH3 145 aa10.42□□□□□ -0.74
CLK3-203ENST00000454830 U3KQE9 123 aa10.42□□□□□ -0.74
CLK3-203ENST00000454830 IGKV3-20P01619 116 aa10.42□□□□□ -0.74
CLK3-203ENST00000454830 NIT1Q86X76 327 aa10.42□□□□□ -0.74
CLK3-203ENST00000454830 C20orf173Q96LM9 149 aa10.42□□□□□ -0.74
CLK3-203ENST00000454830 ATP6V0BQ99437 205 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms