RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 C7orf77A4D0Y5 90 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 DIRC3C9JPN6 131 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 ISLRO14498 428 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 TCRAP04437 139 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 CD7P09564 240 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 BTN1A1Q13410 526 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 TMEM241Q24JQ0 296 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 PSMG4Q5JS54 123 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 C9orf66Q5T8R8 295 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 GOLT1AQ6ZVE7 132 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 C2CD4CQ8TF44 421 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 VGLL1Q99990 258 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 WFDC10AQ9H1F0 79 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 SDF2L1Q9HCN8 221 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 RPS10P5Q9NQ39 176 aa8.17□□□□□ -1.1
SCN9A-205ENST00000454569 NBEAL1Q6ZS30 2694 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 TRBV20OR9-2A0A075B6H5 130 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 TRAV25A0A0B4J276 109 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 PEX7O00628 323 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 IGLV2-11P01706 119 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 MEOX2P50222 304 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 DEFB131AP59861 70 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 ADIRFQ15847 76 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 BEAN1Q3B7T3 259 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 ODF3L2Q3SX64 289 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 APRG1Q8IVJ8 170 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 C5orf17Q8NAS9 161 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 SPAG8Q99932 426 aaPredicted RBP8.16□□□□□ -1.1
SCN9A-205ENST00000454569 AAMDCQ9H7C9 122 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 MAP6D1Q9H9H5 199 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 C19orf73Q9NVV2 129 aa8.16□□□□□ -1.1
SCN9A-205ENST00000454569 PGPEP1LA6NFU8 196 aa8.15□□□□□ -1.1
SCN9A-205ENST00000454569 B4DEV8 164 aa8.15□□□□□ -1.1
SCN9A-205ENST00000454569 G3V4G9 280 aa8.15□□□□□ -1.1
SCN9A-205ENST00000454569 AKR1C3P42330 323 aa8.15□□□□□ -1.1
SCN9A-205ENST00000454569 RPL35P42766 123 aaKnown RBP8.15□□□□□ -1.1
SCN9A-205ENST00000454569 KRTAP10-11P60412 298 aa8.15□□□□□ -1.1
SCN9A-205ENST00000454569 ZNF738Q8NE65 137 aa8.15□□□□□ -1.1
SCN9A-205ENST00000454569 HIST1H2BAQ96A08 127 aa8.15□□□□□ -1.1
SCN9A-205ENST00000454569 MGAM2Q2M2H8 2515 aa8.15□□□□□ -1.11
SCN9A-205ENST00000454569 TRAV2A0A0B4J234 112 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 KNCNA6PVL3 124 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 CNN1P51911 297 aaKnown RBP8.14□□□□□ -1.11
SCN9A-205ENST00000454569 RPL23P62829 140 aaKnown RBP8.14□□□□□ -1.11
SCN9A-205ENST00000454569 PAFAH1B2P68402 229 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 TMEM88Q6PEY1 159 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 CBLN2Q8IUK8 224 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-205ENST00000454569 CMTM2Q8TAZ6 248 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 C9JCJ5 164 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 H3BS24 57 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 ID1P41134 155 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 GNG4P50150 75 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 INSL3P51460 131 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 S100A12P80511 92 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 CENPWQ5EE01 88 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 PRR31Q5SQ13 230 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 OR2K2Q8NGT1 345 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 Q8TAT8 98 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 ATG101Q9BSB4 218 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 GPR61Q9BZJ8 451 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 AGPAT4-IT1Q9H0P7 198 aa8.14□□□□□ -1.11
SCN9A-205ENST00000454569 AURKAIP1Q9NWT8 199 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-205ENST00000454569 OR4C46A6NHA9 309 aa8.13□□□□□ -1.11
SCN9A-205ENST00000454569 IGLV2-8P01709 118 aa8.13□□□□□ -1.11
SCN9A-205ENST00000454569 UBE2G1P62253 170 aa8.13□□□□□ -1.11
SCN9A-205ENST00000454569 LINC01551Q86U37 167 aa8.13□□□□□ -1.11
SCN9A-205ENST00000454569 NHLRC2Q8NBF2 726 aa8.13□□□□□ -1.11
SCN9A-205ENST00000454569 OR8A1Q8NGG7 326 aa8.13□□□□□ -1.11
SCN9A-205ENST00000454569 MRPL53Q96EL3 112 aaKnown RBP8.13□□□□□ -1.11
SCN9A-205ENST00000454569 IGF2BP2-AS1Q96M15 143 aa8.13□□□□□ -1.11
SCN9A-205ENST00000454569 MCRIP2Q9BUT9 160 aaKnown RBP8.13□□□□□ -1.11
SCN9A-205ENST00000454569 SMCO4Q9NRQ5 59 aa8.13□□□□□ -1.11
SCN9A-205ENST00000454569 KLF12Q9Y4X4 402 aa8.13□□□□□ -1.11
SCN9A-205ENST00000454569 A0A087WWC5 75 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 A0A0J9YX75 114 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 RBMY1BA6NDE4 496 aaKnown RBP8.12□□□□□ -1.11
SCN9A-205ENST00000454569 RBMY1EA6NEQ0 496 aaKnown RBP8.12□□□□□ -1.11
SCN9A-205ENST00000454569 IGKV3-20P01619 116 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 RBMY1DP0C7P1 496 aaKnown RBP8.12□□□□□ -1.11
SCN9A-205ENST00000454569 CT45A10P0DMU9 189 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 TAS2R60P59551 318 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 SSTP61278 116 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 SNRPD3P62318 126 aaKnown RBP8.12□□□□□ -1.11
SCN9A-205ENST00000454569 HIST1H1AQ02539 215 aaPredicted RBP8.12□□□□□ -1.11
SCN9A-205ENST00000454569 KIR3DS1Q14943 382 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 Q6ZQT7 251 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 PRNTQ86SH4 94 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 Q8N1Y9 231 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 C8orf49Q96NF6 230 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 PRR25Q96S07 402 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 AP5S1Q9NUS5 200 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 PSG8Q9UQ74 426 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 LY96Q9Y6Y9 160 aa8.12□□□□□ -1.11
SCN9A-205ENST00000454569 K7EQM0 130 aa8.11□□□□□ -1.11
SCN9A-205ENST00000454569 MT-ND4LP03901 98 aa8.11□□□□□ -1.11
SCN9A-205ENST00000454569 CSN1S1P47710 185 aa8.11□□□□□ -1.11
SCN9A-205ENST00000454569 TMEM183BQ1AE95 376 aa8.11□□□□□ -1.11
SCN9A-205ENST00000454569 KRTAP21-3Q3LHN1 58 aa8.11□□□□□ -1.11
SCN9A-205ENST00000454569 RNF212Q495C1 297 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms