RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 HIST1H2BAQ96A08 127 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 LINC00477Q96M19 166 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 ODF3Q96PU9 254 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 ATG101Q9BSB4 218 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 PPP1R14DQ9NXH3 145 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 TMA7Q9Y2S6 64 aaKnown RBP8.51□□□□□ -1.05
SCN9A-204ENST00000452182 C11orf94C9JXX5 98 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 ATP5G3P48201 142 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 APOC4P55056 127 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 AMTNQ6UX39 209 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 CYB561D1Q8N8Q1 229 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 OR4B1Q8NGF8 309 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 CSTL1Q9H114 145 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 VAX2Q9UIW0 290 aa8.51□□□□□ -1.05
SCN9A-204ENST00000452182 IGKV2-40A0A087WW87 121 aaPredicted RBP8.5□□□□□ -1.05
SCN9A-204ENST00000452182 TRBV7-9A0A0J9YWB2 115 aa8.5□□□□□ -1.05
SCN9A-204ENST00000452182 FBLL1A6NHQ2 334 aaKnown RBP8.5□□□□□ -1.05
SCN9A-204ENST00000452182 F6UZH7 168 aa8.5□□□□□ -1.05
SCN9A-204ENST00000452182 K7EQM0 130 aa8.5□□□□□ -1.05
SCN9A-204ENST00000452182 UBE2CO00762 179 aa8.5□□□□□ -1.05
SCN9A-204ENST00000452182 RGS13O14921 159 aa8.5□□□□□ -1.05
SCN9A-204ENST00000452182 IGKV2D-40P01614 121 aaPredicted RBP8.5□□□□□ -1.05
SCN9A-204ENST00000452182 RPL35AP18077 110 aaKnown RBP8.5□□□□□ -1.05
SCN9A-204ENST00000452182 GNG5P63218 68 aa8.5□□□□□ -1.05
SCN9A-204ENST00000452182 MEF2BQ02080 365 aaPredicted RBP8.5□□□□□ -1.05
SCN9A-204ENST00000452182 GOLT1AQ6ZVE7 132 aa8.5□□□□□ -1.05
SCN9A-204ENST00000452182 VGLL1Q99990 258 aa8.5□□□□□ -1.05
SCN9A-204ENST00000452182 AGPAT4-IT1Q9H0P7 198 aa8.5□□□□□ -1.05
SCN9A-204ENST00000452182 LOC102723971A0A1B0GUV8 181 aa8.49□□□□□ -1.05
SCN9A-204ENST00000452182 RBFOX3A6NFN3 312 aa8.49□□□□□ -1.05
SCN9A-204ENST00000452182 PEX7O00628 323 aa8.49□□□□□ -1.05
SCN9A-204ENST00000452182 HAGHQ16775 308 aa8.49□□□□□ -1.05
SCN9A-204ENST00000452182 CLLU1Q5K131 121 aa8.49□□□□□ -1.05
SCN9A-204ENST00000452182 TMEM78Q5T7P6 136 aa8.49□□□□□ -1.05
SCN9A-204ENST00000452182 TMEM75Q8N9X5 138 aa8.49□□□□□ -1.05
SCN9A-204ENST00000452182 PCNPQ8WW12 178 aaKnown RBP8.49□□□□□ -1.05
SCN9A-204ENST00000452182 FAM19A4Q96LR4 140 aa8.49□□□□□ -1.05
SCN9A-204ENST00000452182 FAM210AQ96ND0 272 aa8.49□□□□□ -1.05
SCN9A-204ENST00000452182 C1QTNF4Q9BXJ3 329 aa8.49□□□□□ -1.05
SCN9A-204ENST00000452182 ZNF492Q9P255 531 aa8.49□□□□□ -1.05
SCN9A-204ENST00000452182 LENEPQ9Y5L5 61 aa8.49□□□□□ -1.05
SCN9A-204ENST00000452182 FBN3Q75N90 2809 aa8.48□□□□□ -1.05
SCN9A-204ENST00000452182 PDE6DO43924 150 aa8.48□□□□□ -1.05
SCN9A-204ENST00000452182 NDUFS6O75380 124 aaKnown RBP8.48□□□□□ -1.05
SCN9A-204ENST00000452182 IGKV3-20P01619 116 aa8.48□□□□□ -1.05
SCN9A-204ENST00000452182 AMBPP02760 352 aa8.48□□□□□ -1.05
SCN9A-204ENST00000452182 CT45A10P0DMU9 189 aa8.48□□□□□ -1.05
SCN9A-204ENST00000452182 PRB4P10163 310 aaPredicted RBP8.48□□□□□ -1.05
SCN9A-204ENST00000452182 ZNF138P52744 262 aa8.48□□□□□ -1.05
SCN9A-204ENST00000452182 ERCC8Q13216 396 aa8.48□□□□□ -1.05
SCN9A-204ENST00000452182 ZNF506Q5JVG8 444 aa8.48□□□□□ -1.05
SCN9A-204ENST00000452182 C11orf52Q96A22 123 aa8.48□□□□□ -1.05
SCN9A-204ENST00000452182 RPH3ALQ9UNE2 315 aa8.48□□□□□ -1.05
SCN9A-204ENST00000452182 KLF12Q9Y4X4 402 aa8.48□□□□□ -1.05
SCN9A-204ENST00000452182 IGLV2-11P01706 119 aa8.47□□□□□ -1.05
SCN9A-204ENST00000452182 GIG44P09565 113 aaPredicted RBP8.47□□□□□ -1.05
SCN9A-204ENST00000452182 CRISP2P16562 243 aa8.47□□□□□ -1.05
SCN9A-204ENST00000452182 TSPOP30536 169 aa8.47□□□□□ -1.05
SCN9A-204ENST00000452182 Q6ZWC4 215 aa8.47□□□□□ -1.05
SCN9A-204ENST00000452182 B9D2Q9BPU9 175 aa8.47□□□□□ -1.05
SCN9A-204ENST00000452182 SLC35B3Q9H1N7 401 aa8.47□□□□□ -1.05
SCN9A-204ENST00000452182 TRBV6-1A0A0K0K1D8 114 aa8.47□□□□□ -1.05
SCN9A-204ENST00000452182 CA1P00915 261 aaPredicted RBP8.47□□□□□ -1.05
SCN9A-204ENST00000452182 S100A9P06702 114 aaKnown RBP8.47□□□□□ -1.05
SCN9A-204ENST00000452182 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
SCN9A-204ENST00000452182 CDKN1BP46527 198 aa8.47□□□□□ -1.05
SCN9A-204ENST00000452182 FLI1Q01543 452 aaPredicted RBP8.47□□□□□ -1.05
SCN9A-204ENST00000452182 C2CD4CQ8TF44 421 aa8.47□□□□□ -1.05
SCN9A-204ENST00000452182 RARRES2Q99969 163 aa8.47□□□□□ -1.05
SCN9A-204ENST00000452182 TRAV8-1A0A0A6YYK1 113 aa8.46□□□□□ -1.06
SCN9A-204ENST00000452182 SCO2A0A1W2PP80 73 aa8.46□□□□□ -1.06
SCN9A-204ENST00000452182 KLLNB2CW77 178 aa8.46□□□□□ -1.06
SCN9A-204ENST00000452182 LEPP41159 167 aa8.46□□□□□ -1.06
SCN9A-204ENST00000452182 TMEM183BQ1AE95 376 aa8.46□□□□□ -1.06
SCN9A-204ENST00000452182 SPINK13Q1W4C9 94 aa8.46□□□□□ -1.06
SCN9A-204ENST00000452182 TOR2AQ5JU69 321 aa8.46□□□□□ -1.06
SCN9A-204ENST00000452182 SBSPONQ8IVN8 264 aa8.46□□□□□ -1.06
SCN9A-204ENST00000452182 CSNK1G2-AS1Q8NCQ2 148 aa8.46□□□□□ -1.06
SCN9A-204ENST00000452182 Q8TAT8 98 aa8.46□□□□□ -1.06
SCN9A-204ENST00000452182 FMC1Q96HJ9 113 aa8.46□□□□□ -1.06
SCN9A-204ENST00000452182 LINC00479Q96M42 142 aa8.46□□□□□ -1.06
SCN9A-204ENST00000452182 EIF5A2Q9GZV4 153 aaKnown RBP8.46□□□□□ -1.06
SCN9A-204ENST00000452182 SMDT1Q9H4I9 107 aa8.46□□□□□ -1.06
SCN9A-204ENST00000452182 PSG8Q9UQ74 426 aa8.46□□□□□ -1.06
SCN9A-204ENST00000452182 TMEM250H0YL14 139 aa8.45□□□□□ -1.06
SCN9A-204ENST00000452182 M0R2Z0 102 aa8.45□□□□□ -1.06
SCN9A-204ENST00000452182 CRXO43186 299 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-204ENST00000452182 AKR1C3P42330 323 aa8.45□□□□□ -1.06
SCN9A-204ENST00000452182 SAPCD1Q5SSQ6 148 aa8.45□□□□□ -1.06
SCN9A-204ENST00000452182 ZFAND2AQ8N6M9 145 aa8.45□□□□□ -1.06
SCN9A-204ENST00000452182 IGF2BP2-AS1Q96M15 143 aa8.45□□□□□ -1.06
SCN9A-204ENST00000452182 TM2D3Q9BRN9 247 aa8.45□□□□□ -1.06
SCN9A-204ENST00000452182 XCL2Q9UBD3 114 aa8.45□□□□□ -1.06
SCN9A-204ENST00000452182 TP53TG1Q9Y2A0 90 aa8.45□□□□□ -1.06
SCN9A-204ENST00000452182 PRKDCP78527 4128 aaKnown RBP8.45□□□□□ -1.06
SCN9A-204ENST00000452182 FXYD7P58549 80 aa8.44□□□□□ -1.06
SCN9A-204ENST00000452182 UBE2G1P62253 170 aa8.44□□□□□ -1.06
SCN9A-204ENST00000452182 SGK494Q96LW2 274 aa8.44□□□□□ -1.06
SCN9A-204ENST00000452182 C20orf144Q9BQM9 153 aa8.44□□□□□ -1.06
SCN9A-204ENST00000452182 NDFIP1Q9BT67 221 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms