RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 RASL10AQ92737 203 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 MDFICQ9P1T7 246 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 CSDC2Q9Y534 153 aaKnown RBP6.76□□□□□ -1.33
LSM5-208ENST00000450169 ZDBF2Q9HCK1 2354 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 PINLYPA6NC86 204 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 LGALS1P09382 135 aaKnown RBP6.76□□□□□ -1.33
LSM5-208ENST00000450169 CCL11P51671 97 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 Q6ZQT7 251 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 OR11H6Q8NGC7 330 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 NRGNQ92686 78 aa6.76□□□□□ -1.33
LSM5-208ENST00000450169 FRYQ5TBA9 3013 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 TGFAP01135 160 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 C17orf58Q2M2W7 97 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 SPRNQ5BIV9 151 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 RUSC1-AS1Q66K80 236 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 ZNRF1Q8ND25 227 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 MYOZ3Q8TDC0 251 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 C8orf49Q96NF6 230 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 TMEM14CQ9P0S9 112 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 HIGD1AQ9Y241 93 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 DOCK7Q96N67 2140 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 DOCK10Q96BY6 2186 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 SLC25A20O43772 301 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 GAS8-AS1O95177 125 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 CGB3P0DN86 165 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 CGB7P0DN87 165 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 PRB4P10163 310 aaPredicted RBP6.75□□□□□ -1.33
LSM5-208ENST00000450169 C10orf55Q5SWW7 151 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 TMEM78Q5T7P6 136 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 C1orf210Q8IVY1 113 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 SLC25A45Q8N413 288 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 AAMDCQ9H7C9 122 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 FREM2Q5SZK8 3169 aa6.75□□□□□ -1.33
LSM5-208ENST00000450169 CGB1A6NKQ9 187 aa6.74□□□□□ -1.33
LSM5-208ENST00000450169 SH2D1AO60880 128 aa6.74□□□□□ -1.33
LSM5-208ENST00000450169 SRSF9Q13242 221 aaKnown RBP eCLIP6.74□□□□□ -1.33
LSM5-208ENST00000450169 TMEM190Q8WZ59 177 aa6.74□□□□□ -1.33
LSM5-208ENST00000450169 RNF185Q96GF1 192 aa6.74□□□□□ -1.33
LSM5-208ENST00000450169 NBEAQ8NFP9 2946 aa6.74□□□□□ -1.33
LSM5-208ENST00000450169 A0A1W2PPI3 338 aa6.74□□□□□ -1.33
LSM5-208ENST00000450169 TIMM8AO60220 97 aaPredicted RBP6.74□□□□□ -1.33
LSM5-208ENST00000450169 CD7P09564 240 aa6.74□□□□□ -1.33
LSM5-208ENST00000450169 NDUFA11Q86Y39 141 aa6.74□□□□□ -1.33
LSM5-208ENST00000450169 TRBV19A0A075B6N1 114 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 IGHV3OR15-7A0A075B7D8 119 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 IGHV5-10-1A0A0J9YXX1 117 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 MAGEA5P43359 124 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 CXCL12P48061 93 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 LYZP61626 148 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 KHDC1LQ5JSQ8 128 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 SCGB1D4Q6XE38 83 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 Q8N8P6 123 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 RAXQ9Y2V3 346 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 NCOR1O75376 2440 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 BDP1A6H8Y1 2624 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 PCNX2A6NKB5 2137 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 C9JAW5 83 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 F8VRH5 84 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 H7C1H1 209 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 SIGLEC15Q6ZMC9 328 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 C3orf56Q8N813 242 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 C15orf53Q8NAA6 179 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 DNAJC30Q96LL9 226 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 C17orf77Q96MU5 243 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 ODF3Q96PU9 254 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 LINC01587Q99440 93 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 ZNRD1Q9P1U0 126 aa6.73□□□□□ -1.33
LSM5-208ENST00000450169 NAV3Q8IVL0 2385 aa6.72□□□□□ -1.33
LSM5-208ENST00000450169 ZNF815PA8K554 130 aa6.72□□□□□ -1.33
LSM5-208ENST00000450169 SRRM5B3KS81 715 aa6.72□□□□□ -1.33
LSM5-208ENST00000450169 TMEM167AQ8TBQ9 72 aa6.72□□□□□ -1.33
LSM5-208ENST00000450169 MSRB1Q9NZV6 116 aa6.72□□□□□ -1.33
LSM5-208ENST00000450169 ONECUT1Q9UBC0 465 aa6.72□□□□□ -1.33
LSM5-208ENST00000450169 IGLV2-18A0A075B6J9 118 aa6.71□□□□□ -1.33
LSM5-208ENST00000450169 TRAV8-4A0A0B4J246 113 aa6.71□□□□□ -1.33
LSM5-208ENST00000450169 IGLC6P0CF74 106 aa6.71□□□□□ -1.33
LSM5-208ENST00000450169 GATA1P15976 413 aaPredicted RBP6.71□□□□□ -1.33
LSM5-208ENST00000450169 LAGE3Q14657 143 aa6.71□□□□□ -1.33
LSM5-208ENST00000450169 HCP5Q6MZN7 132 aa6.71□□□□□ -1.33
LSM5-208ENST00000450169 C1orf43Q9BWL3 253 aa6.71□□□□□ -1.33
LSM5-208ENST00000450169 MRPL20Q9BYC9 149 aaKnown RBP6.71□□□□□ -1.33
LSM5-208ENST00000450169 NGBQ9NPG2 151 aa6.71□□□□□ -1.33
LSM5-208ENST00000450169 CELSR3Q9NYQ7 3312 aa6.71□□□□□ -1.34
LSM5-208ENST00000450169 IGHV3-21A0A0B4J1V1 117 aa6.71□□□□□ -1.34
LSM5-208ENST00000450169 TRAV12-1A0A0B4J245 112 aa6.71□□□□□ -1.34
LSM5-208ENST00000450169 M0R3E3 92 aa6.71□□□□□ -1.34
LSM5-208ENST00000450169 EGR2P11161 476 aaPredicted RBP6.71□□□□□ -1.34
LSM5-208ENST00000450169 LYPD1Q8N2G4 141 aa6.71□□□□□ -1.34
LSM5-208ENST00000450169 C10orf126Q8N4M7 172 aa6.71□□□□□ -1.34
LSM5-208ENST00000450169 FAM57AQ8TBR7 257 aa6.71□□□□□ -1.34
LSM5-208ENST00000450169 NTN5Q8WTR8 489 aaPredicted RBP6.71□□□□□ -1.34
LSM5-208ENST00000450169 PLEKHB2Q96CS7 222 aa6.71□□□□□ -1.34
LSM5-208ENST00000450169 PRADC1Q9BSG0 188 aa6.71□□□□□ -1.34
LSM5-208ENST00000450169 EFNA4P52798 201 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 GUSBP11Q6P575 273 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 OR4C13Q8NGP0 309 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 CHCHD5Q9BSY4 110 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 SCNM1Q9BWG6 230 aa6.7□□□□□ -1.34
LSM5-208ENST00000450169 C21orf62Q9NYP8 219 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms