RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 NUP37Q8NFH4 326 aa10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 GAGE2DQ9UEU5 116 aa10.65□□□□□ -0.7
SYNGAP1-204ENST00000449372 DSCAMO60469 2012 aa10.65□□□□□ -0.71
SYNGAP1-204ENST00000449372 TCRAP04437 139 aa10.65□□□□□ -0.71
SYNGAP1-204ENST00000449372 TEX36Q5VZQ5 186 aa10.65□□□□□ -0.71
SYNGAP1-204ENST00000449372 CARD19Q96LW7 228 aa10.65□□□□□ -0.71
SYNGAP1-204ENST00000449372 HIST1H4GQ99525 98 aa10.65□□□□□ -0.71
SYNGAP1-204ENST00000449372 Q9H3A6 140 aa10.65□□□□□ -0.71
SYNGAP1-204ENST00000449372 RHODO00212 210 aa10.64□□□□□ -0.71
SYNGAP1-204ENST00000449372 CD40P25942 277 aa10.64□□□□□ -0.71
SYNGAP1-204ENST00000449372 MYOD1P15172 320 aa10.64□□□□□ -0.71
SYNGAP1-204ENST00000449372 GTSCR1Q86UQ5 136 aa10.64□□□□□ -0.71
SYNGAP1-204ENST00000449372 DLX4Q92988 240 aaPredicted RBP10.64□□□□□ -0.71
SYNGAP1-204ENST00000449372 PPDPFQ9H3Y8 114 aa10.64□□□□□ -0.71
SYNGAP1-204ENST00000449372 HHLA3Q9XRX5 114 aa10.64□□□□□ -0.71
SYNGAP1-204ENST00000449372 AGRNO00468 2067 aa10.64□□□□□ -0.71
SYNGAP1-204ENST00000449372 THBDP07204 575 aa10.64□□□□□ -0.71
SYNGAP1-204ENST00000449372 SRD5A1P18405 259 aa10.64□□□□□ -0.71
SYNGAP1-204ENST00000449372 IGKV1-16P04430 117 aa10.63□□□□□ -0.71
SYNGAP1-204ENST00000449372 LYPD1Q8N2G4 141 aa10.63□□□□□ -0.71
SYNGAP1-204ENST00000449372 TRBV6-1A0A0K0K1D8 114 aa10.63□□□□□ -0.71
SYNGAP1-204ENST00000449372 D6R8Y8 96 aa10.63□□□□□ -0.71
SYNGAP1-204ENST00000449372 ZNF688P0C7X2 276 aa10.63□□□□□ -0.71
SYNGAP1-204ENST00000449372 TMEM133Q9H2Q1 129 aa10.63□□□□□ -0.71
SYNGAP1-204ENST00000449372 AAMDCQ9H7C9 122 aa10.63□□□□□ -0.71
SYNGAP1-204ENST00000449372 TMEM14CQ9P0S9 112 aa10.63□□□□□ -0.71
SYNGAP1-204ENST00000449372 IGHV1-46P01743 117 aa10.63□□□□□ -0.71
SYNGAP1-204ENST00000449372 LINC01559Q495D7 138 aa10.63□□□□□ -0.71
SYNGAP1-204ENST00000449372 KLF17Q5JT82 389 aaPredicted RBP10.63□□□□□ -0.71
SYNGAP1-204ENST00000449372 FAM216BQ8N7L0 139 aa10.63□□□□□ -0.71
SYNGAP1-204ENST00000449372 RASL11BQ9BPW5 248 aa10.63□□□□□ -0.71
SYNGAP1-204ENST00000449372 TPPP3Q9BW30 176 aa10.63□□□□□ -0.71
SYNGAP1-204ENST00000449372 TMEM262E9PQX1 116 aa10.62□□□□□ -0.71
SYNGAP1-204ENST00000449372 TAL2Q16559 108 aa10.62□□□□□ -0.71
SYNGAP1-204ENST00000449372 PRR30Q53SZ7 412 aaPredicted RBP10.62□□□□□ -0.71
SYNGAP1-204ENST00000449372 MAP1LC3AQ9H492 121 aa10.62□□□□□ -0.71
SYNGAP1-204ENST00000449372 MSRB2Q9Y3D2 182 aa10.62□□□□□ -0.71
SYNGAP1-204ENST00000449372 PLAUP00749 431 aa10.62□□□□□ -0.71
SYNGAP1-204ENST00000449372 MYCNOSP40205 109 aa10.62□□□□□ -0.71
SYNGAP1-204ENST00000449372 PSMB2P49721 201 aa10.62□□□□□ -0.71
SYNGAP1-204ENST00000449372 TEN1Q86WV5 123 aa10.62□□□□□ -0.71
SYNGAP1-204ENST00000449372 CIARTQ8N365 385 aaPredicted RBP10.62□□□□□ -0.71
SYNGAP1-204ENST00000449372 WI2-2373I1.2A0A1W2PRP0 233 aa10.62□□□□□ -0.71
SYNGAP1-204ENST00000449372 IFITM1P13164 125 aa10.62□□□□□ -0.71
SYNGAP1-204ENST00000449372 LYZP61626 148 aa10.62□□□□□ -0.71
SYNGAP1-204ENST00000449372 SRSF12Q8WXF0 261 aaKnown RBP10.61□□□□□ -0.71
SYNGAP1-204ENST00000449372 CADP27708 2225 aa10.61□□□□□ -0.71
SYNGAP1-204ENST00000449372 TMEM8BA6NDV4 472 aa10.61□□□□□ -0.71
SYNGAP1-204ENST00000449372 CENPVL3A0A0U1RRI6 287 aa10.61□□□□□ -0.71
SYNGAP1-204ENST00000449372 ZC2HC1BQ5TFG8 222 aa10.61□□□□□ -0.71
SYNGAP1-204ENST00000449372 PRNTQ86SH4 94 aa10.61□□□□□ -0.71
SYNGAP1-204ENST00000449372 HOXA3O43365 443 aaPredicted RBP10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 SNCGO76070 127 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 APC2O95996 2303 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 IGKCP01834 107 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 IL4P05112 153 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 PRSS1P07477 247 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 FAM159AQ6UWV7 190 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 DYNLRB1Q9NP97 96 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 ZZEF1O43149 2961 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 RELNP78509 3460 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 LINC01548A6NM66 108 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 SFTA2Q6UW10 78 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 AJUBAQ96IF1 538 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 LOC107984156A0A0G2JMH3 177 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 Q86TA4 180 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 ARL17AQ8IVW1 177 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 RNF5Q99942 180 aa10.6□□□□□ -0.71
SYNGAP1-204ENST00000449372 UTF1Q5T230 341 aa10.59□□□□□ -0.71
SYNGAP1-204ENST00000449372 MORN3Q6PF18 240 aaPredicted RBP10.59□□□□□ -0.71
SYNGAP1-204ENST00000449372 MAPKAPK5-AS1Q8N8E1 139 aa10.59□□□□□ -0.71
SYNGAP1-204ENST00000449372 FBXL15Q9H469 300 aa10.59□□□□□ -0.71
SYNGAP1-204ENST00000449372 TMSB15BA0A087X1C1 80 aa10.59□□□□□ -0.71
SYNGAP1-204ENST00000449372 SHISA9B4DS77 424 aa10.59□□□□□ -0.71
SYNGAP1-204ENST00000449372 FAM201AQ5SY85 155 aa10.59□□□□□ -0.71
SYNGAP1-204ENST00000449372 PVRIGQ6DKI7 326 aa10.59□□□□□ -0.71
SYNGAP1-204ENST00000449372 OVOL3O00110 214 aa10.59□□□□□ -0.71
SYNGAP1-204ENST00000449372 DUX4L9Q6RFH8 374 aaPredicted RBP10.59□□□□□ -0.71
SYNGAP1-204ENST00000449372 GFRALQ6UXV0 394 aa10.59□□□□□ -0.71
SYNGAP1-204ENST00000449372 PATE2Q6UY27 113 aa10.59□□□□□ -0.71
SYNGAP1-204ENST00000449372 ORMDL3Q8N138 153 aa10.59□□□□□ -0.71
SYNGAP1-204ENST00000449372 TRAV25A0A0B4J276 109 aa10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 EVI2AP22794 236 aa10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 WT1-ASQ06250 92 aa10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 MEIG1Q5JSS6 88 aa10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 C1orf229Q6ZS94 237 aaPredicted RBP10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 ZGRF1Q86YA3 2104 aa10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 TMEM158Q8WZ71 300 aa10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 RITA1Q96K30 269 aa10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 ZMAT4Q9H898 229 aa10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 GOLT1AQ6ZVE7 132 aa10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 TMEM75Q8N9X5 138 aa10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 TRAV8-1A0A0A6YYK1 113 aa10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 TRAV4A0A0B4J268 109 aa10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 PAX8Q06710 450 aa10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 CEP295Q9C0D2 2601 aa10.58□□□□□ -0.72
SYNGAP1-204ENST00000449372 C17orf100A8MU93 164 aa10.57□□□□□ -0.72
SYNGAP1-204ENST00000449372 PIEZO2Q9H5I5 2752 aa10.57□□□□□ -0.72
SYNGAP1-204ENST00000449372 FCN3O75636 299 aa10.57□□□□□ -0.72
SYNGAP1-204ENST00000449372 AMN1Q8IY45 258 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms