RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 A0A0J9YX75 114 aa14.33□□□□□ -0.12
RPS28-202ENST00000449223 SAV1Q9H4B6 383 aaPredicted RBP14.33□□□□□ -0.12
RPS28-202ENST00000449223 NAT8Q9UHE5 227 aa14.33□□□□□ -0.12
RPS28-202ENST00000449223 PSG8Q9UQ74 426 aa14.33□□□□□ -0.12
RPS28-202ENST00000449223 ZFP30Q9Y2G7 519 aa14.33□□□□□ -0.12
RPS28-202ENST00000449223 LENEPQ9Y5L5 61 aa14.33□□□□□ -0.12
RPS28-202ENST00000449223 S100A1P23297 94 aa14.32□□□□□ -0.12
RPS28-202ENST00000449223 GNG4P50150 75 aa14.32□□□□□ -0.12
RPS28-202ENST00000449223 DEFB131AP59861 70 aa14.32□□□□□ -0.12
RPS28-202ENST00000449223 CENPWQ5EE01 88 aa14.32□□□□□ -0.12
RPS28-202ENST00000449223 COX8CQ7Z4L0 72 aa14.32□□□□□ -0.12
RPS28-202ENST00000449223 OR10J6PQ8NGY7 276 aa14.32□□□□□ -0.12
RPS28-202ENST00000449223 LINC00477Q96M19 166 aa14.32□□□□□ -0.12
RPS28-202ENST00000449223 MLST8Q9BVC4 326 aa14.32□□□□□ -0.12
RPS28-202ENST00000449223 AGPAT4-IT1Q9H0P7 198 aa14.32□□□□□ -0.12
RPS28-202ENST00000449223 TRBV7-9A0A0J9YWB2 115 aa14.31□□□□□ -0.12
RPS28-202ENST00000449223 A8MTW9 85 aa14.31□□□□□ -0.12
RPS28-202ENST00000449223 PNRC1Q12796 327 aaPredicted RBP14.31□□□□□ -0.12
RPS28-202ENST00000449223 TMEM241Q24JQ0 296 aa14.31□□□□□ -0.12
RPS28-202ENST00000449223 TMEM78Q5T7P6 136 aa14.31□□□□□ -0.12
RPS28-202ENST00000449223 SDF2L1Q9HCN8 221 aa14.31□□□□□ -0.12
RPS28-202ENST00000449223 C19orf73Q9NVV2 129 aa14.31□□□□□ -0.12
RPS28-202ENST00000449223 ZNF492Q9P255 531 aa14.31□□□□□ -0.12
RPS28-202ENST00000449223 F6UB75 175 aa14.31□□□□□ -0.12
RPS28-202ENST00000449223 IGLV2-8P01709 118 aa14.31□□□□□ -0.12
RPS28-202ENST00000449223 LINC01551Q86U37 167 aa14.31□□□□□ -0.12
RPS28-202ENST00000449223 BAGE2Q86Y30 109 aa14.31□□□□□ -0.12
RPS28-202ENST00000449223 OR11H12B2RN74 326 aa14.3□□□□□ -0.12
RPS28-202ENST00000449223 HLA-DRB4P13762 266 aa14.3□□□□□ -0.12
RPS28-202ENST00000449223 ZNF138P52744 262 aa14.3□□□□□ -0.12
RPS28-202ENST00000449223 DEFB1P60022 68 aa14.3□□□□□ -0.12
RPS28-202ENST00000449223 SAPCD1Q5SSQ6 148 aa14.3□□□□□ -0.12
RPS28-202ENST00000449223 GDF5OSQ5U4N7 250 aa14.3□□□□□ -0.12
RPS28-202ENST00000449223 EBLN2Q6P2I7 272 aa14.3□□□□□ -0.12
RPS28-202ENST00000449223 TMEM183AQ8IXX5 376 aa14.3□□□□□ -0.12
RPS28-202ENST00000449223 FAM19A4Q96LR4 140 aa14.3□□□□□ -0.12
RPS28-202ENST00000449223 SGK494Q96LW2 274 aa14.3□□□□□ -0.12
RPS28-202ENST00000449223 ODF3Q96PU9 254 aa14.3□□□□□ -0.12
RPS28-202ENST00000449223 PRR25Q96S07 402 aa14.3□□□□□ -0.12
RPS28-202ENST00000449223 HLA-DRB4X5D2U9 266 aa14.3□□□□□ -0.12
RPS28-202ENST00000449223 DUSP14O95147 198 aaKnown RBP14.29□□□□□ -0.12
RPS28-202ENST00000449223 PRB4P10163 310 aaPredicted RBP14.29□□□□□ -0.12
RPS28-202ENST00000449223 ERCC8Q13216 396 aa14.29□□□□□ -0.12
RPS28-202ENST00000449223 PRNTQ86SH4 94 aa14.29□□□□□ -0.12
RPS28-202ENST00000449223 TVP23CQ96ET8 276 aa14.29□□□□□ -0.12
RPS28-202ENST00000449223 CLUHP3Q96NS8 147 aa14.29□□□□□ -0.12
RPS28-202ENST00000449223 APOC3P02656 99 aa14.28□□□□□ -0.12
RPS28-202ENST00000449223 CD7P09564 240 aa14.28□□□□□ -0.12
RPS28-202ENST00000449223 RPL23P62829 140 aaKnown RBP14.28□□□□□ -0.12
RPS28-202ENST00000449223 HIST1H1AQ02539 215 aaPredicted RBP14.28□□□□□ -0.12
RPS28-202ENST00000449223 EGFEM1PQ0D2K5 195 aa14.28□□□□□ -0.12
RPS28-202ENST00000449223 SVBPQ8N300 66 aa14.28□□□□□ -0.12
RPS28-202ENST00000449223 OCC1Q8TAD7 63 aa14.28□□□□□ -0.12
RPS28-202ENST00000449223 CMYA5Q8N3K9 4069 aa14.28□□□□□ -0.12
RPS28-202ENST00000449223 H3BMM0 161 aa14.27□□□□□ -0.12
RPS28-202ENST00000449223 ZNF705DP0CH99 300 aaPredicted RBP14.27□□□□□ -0.12
RPS28-202ENST00000449223 ZNF705BP0CI00 300 aaPredicted RBP14.27□□□□□ -0.12
RPS28-202ENST00000449223 CT45A10P0DMU9 189 aa14.27□□□□□ -0.12
RPS28-202ENST00000449223 Q8TAT8 98 aa14.27□□□□□ -0.12
RPS28-202ENST00000449223 AGRNO00468 2067 aa14.27□□□□□ -0.13
RPS28-202ENST00000449223 PGPEP1LA6NFU8 196 aa14.26□□□□□ -0.13
RPS28-202ENST00000449223 K7EN84 100 aa14.26□□□□□ -0.13
RPS28-202ENST00000449223 CRISP2P16562 243 aa14.26□□□□□ -0.13
RPS28-202ENST00000449223 NDFIP1Q9BT67 221 aa14.26□□□□□ -0.13
RPS28-202ENST00000449223 GCGP01275 180 aa14.25□□□□□ -0.13
RPS28-202ENST00000449223 OXLD1Q5BKU9 147 aa14.25□□□□□ -0.13
RPS28-202ENST00000449223 GTSCR1Q86UQ5 136 aa14.25□□□□□ -0.13
RPS28-202ENST00000449223 APRG1Q8IVJ8 170 aa14.25□□□□□ -0.13
RPS28-202ENST00000449223 ZMAT5Q9UDW3 170 aaKnown RBP14.25□□□□□ -0.13
RPS28-202ENST00000449223 ACTL10Q5JWF8 245 aa14.25□□□□□ -0.13
RPS28-202ENST00000449223 AMTNQ6UX39 209 aa14.25□□□□□ -0.13
RPS28-202ENST00000449223 ISOC2Q96AB3 205 aa14.25□□□□□ -0.13
RPS28-202ENST00000449223 BIN3Q9NQY0 253 aa14.25□□□□□ -0.13
RPS28-202ENST00000449223 KNCNA6PVL3 124 aa14.24□□□□□ -0.13
RPS28-202ENST00000449223 B4DEV8 164 aa14.24□□□□□ -0.13
RPS28-202ENST00000449223 SNAPINO95295 136 aa14.24□□□□□ -0.13
RPS28-202ENST00000449223 ZNF124Q15973 351 aa14.24□□□□□ -0.13
RPS28-202ENST00000449223 ZFAND2AQ8N6M9 145 aa14.24□□□□□ -0.13
RPS28-202ENST00000449223 ADIRFQ15847 76 aa14.23□□□□□ -0.13
RPS28-202ENST00000449223 SAMD5Q5TGI4 173 aa14.23□□□□□ -0.13
RPS28-202ENST00000449223 NHLRC2Q8NBF2 726 aa14.23□□□□□ -0.13
RPS28-202ENST00000449223 CLRN3Q8NCR9 226 aa14.23□□□□□ -0.13
RPS28-202ENST00000449223 ZC2HC1AQ96GY0 325 aa14.23□□□□□ -0.13
RPS28-202ENST00000449223 KLLNB2CW77 178 aa14.22□□□□□ -0.13
RPS28-202ENST00000449223 RHEBQ15382 184 aa14.22□□□□□ -0.13
RPS28-202ENST00000449223 SMUG1Q53HV7 270 aa14.22□□□□□ -0.13
RPS28-202ENST00000449223 FAM231DQ6ZW35 169 aa14.22□□□□□ -0.13
RPS28-202ENST00000449223 TRPT1Q86TN4 253 aaKnown RBP14.22□□□□□ -0.13
RPS28-202ENST00000449223 C8orf49Q96NF6 230 aa14.22□□□□□ -0.13
RPS28-202ENST00000449223 AURKAIP1Q9NWT8 199 aaPredicted RBP14.22□□□□□ -0.13
RPS28-202ENST00000449223 Q8N1Y9 231 aa14.21□□□□□ -0.13
RPS28-202ENST00000449223 OR4B1Q8NGF8 309 aa14.21□□□□□ -0.13
RPS28-202ENST00000449223 ASCL2Q99929 193 aa14.21□□□□□ -0.13
RPS28-202ENST00000449223 C19orf71A6NCJ1 209 aa14.2□□□□□ -0.14
RPS28-202ENST00000449223 MGST1P10620 155 aaKnown RBP14.2□□□□□ -0.14
RPS28-202ENST00000449223 LEPP41159 167 aa14.2□□□□□ -0.14
RPS28-202ENST00000449223 STHQ8IWL8 128 aa14.2□□□□□ -0.14
RPS28-202ENST00000449223 RBMY1BA6NDE4 496 aaKnown RBP14.2□□□□□ -0.14
RPS28-202ENST00000449223 RBMY1EA6NEQ0 496 aaKnown RBP14.2□□□□□ -0.14
RPS28-202ENST00000449223 M0R036 132 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms