RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 TRIM63Q969Q1 353 aa12.19□□□□□ -0.46
CHCHD3-203ENST00000448878 LINC00477Q96M19 166 aa12.19□□□□□ -0.46
CHCHD3-203ENST00000448878 ARPC5LQ9BPX5 153 aa12.19□□□□□ -0.46
CHCHD3-203ENST00000448878 MRPS26Q9BYN8 205 aaKnown RBP12.19□□□□□ -0.46
CHCHD3-203ENST00000448878 TSC22D2O75157 780 aa12.18□□□□□ -0.46
CHCHD3-203ENST00000448878 OR4E1P0C645 316 aa12.18□□□□□ -0.46
CHCHD3-203ENST00000448878 CAMLGP49069 296 aa12.18□□□□□ -0.46
CHCHD3-203ENST00000448878 ZNF415Q09FC8 603 aa12.18□□□□□ -0.46
CHCHD3-203ENST00000448878 RAB31Q13636 194 aa12.18□□□□□ -0.46
CHCHD3-203ENST00000448878 FHL2Q14192 279 aa12.18□□□□□ -0.46
CHCHD3-203ENST00000448878 TIMM9Q9Y5J7 89 aa12.18□□□□□ -0.46
CHCHD3-203ENST00000448878 KLLNB2CW77 178 aa12.17□□□□□ -0.46
CHCHD3-203ENST00000448878 CRYGDP07320 174 aa12.17□□□□□ -0.46
CHCHD3-203ENST00000448878 UBE2MP61081 183 aaKnown RBP12.17□□□□□ -0.46
CHCHD3-203ENST00000448878 IAH1Q2TAA2 248 aaPredicted RBP12.17□□□□□ -0.46
CHCHD3-203ENST00000448878 IBA57Q5T440 356 aaKnown RBP12.17□□□□□ -0.46
CHCHD3-203ENST00000448878 MIC13Q5XKP0 118 aa12.17□□□□□ -0.46
CHCHD3-203ENST00000448878 NRARPQ7Z6K4 114 aa12.17□□□□□ -0.46
CHCHD3-203ENST00000448878 OR1L4Q8NGR5 311 aa12.17□□□□□ -0.46
CHCHD3-203ENST00000448878 VGLL1Q99990 258 aa12.17□□□□□ -0.46
CHCHD3-203ENST00000448878 MRPL32Q9BYC8 188 aaKnown RBP12.17□□□□□ -0.46
CHCHD3-203ENST00000448878 SLIRPQ9GZT3 109 aaKnown RBP12.17□□□□□ -0.46
CHCHD3-203ENST00000448878 AGPAT4-IT1Q9H0P7 198 aa12.17□□□□□ -0.46
CHCHD3-203ENST00000448878 K7EP13 123 aa12.16□□□□□ -0.46
CHCHD3-203ENST00000448878 NOL3O60936 208 aaKnown RBP12.16□□□□□ -0.46
CHCHD3-203ENST00000448878 TAS2R30P59541 319 aa12.16□□□□□ -0.46
CHCHD3-203ENST00000448878 BLNKQ8WV28 456 aa12.16□□□□□ -0.46
CHCHD3-203ENST00000448878 TMEM70Q9BUB7 260 aa12.16□□□□□ -0.46
CHCHD3-203ENST00000448878 GGACTQ9BVM4 153 aa12.16□□□□□ -0.46
CHCHD3-203ENST00000448878 IGHV1OR15-1A0A075B7D0 117 aa12.15□□□□□ -0.46
CHCHD3-203ENST00000448878 K7EQD1 137 aa12.15□□□□□ -0.46
CHCHD3-203ENST00000448878 L7N2F9 121 aa12.15□□□□□ -0.46
CHCHD3-203ENST00000448878 SFTA3P0C7M3 94 aa12.15□□□□□ -0.46
CHCHD3-203ENST00000448878 GYPEP15421 78 aa12.15□□□□□ -0.46
CHCHD3-203ENST00000448878 BCAP31P51572 246 aa12.15□□□□□ -0.46
CHCHD3-203ENST00000448878 VAMP2P63027 116 aa12.15□□□□□ -0.46
CHCHD3-203ENST00000448878 C4orf46Q504U0 113 aa12.15□□□□□ -0.46
CHCHD3-203ENST00000448878 TMEM78Q5T7P6 136 aa12.15□□□□□ -0.46
CHCHD3-203ENST00000448878 C12orf45Q8N5I9 185 aaPredicted RBP12.15□□□□□ -0.46
CHCHD3-203ENST00000448878 MRPL53Q96EL3 112 aaKnown RBP12.15□□□□□ -0.46
CHCHD3-203ENST00000448878 PFDN5Q99471 154 aa12.15□□□□□ -0.46
CHCHD3-203ENST00000448878 FLVCR2Q9UPI3 526 aa12.15□□□□□ -0.46
CHCHD3-203ENST00000448878 VPS13BQ7Z7G8 4022 aa12.14□□□□□ -0.47
CHCHD3-203ENST00000448878 TRBV19A0A075B6N1 114 aa12.14□□□□□ -0.47
CHCHD3-203ENST00000448878 ZNF253O75346 499 aa12.14□□□□□ -0.47
CHCHD3-203ENST00000448878 INPP1P49441 399 aa12.14□□□□□ -0.47
CHCHD3-203ENST00000448878 TMBIM6P55061 237 aa12.14□□□□□ -0.47
CHCHD3-203ENST00000448878 Q6ZQT7 251 aa12.14□□□□□ -0.47
CHCHD3-203ENST00000448878 EXOC3-AS1Q8N2X6 119 aa12.14□□□□□ -0.47
CHCHD3-203ENST00000448878 C10orf126Q8N4M7 172 aa12.14□□□□□ -0.47
CHCHD3-203ENST00000448878 PRELID1Q9Y255 219 aa12.14□□□□□ -0.47
CHCHD3-203ENST00000448878 RCL1Q9Y2P8 373 aaKnown RBP12.14□□□□□ -0.47
CHCHD3-203ENST00000448878 IGKV2-40A0A087WW87 121 aaPredicted RBP12.13□□□□□ -0.47
CHCHD3-203ENST00000448878 C7orf66A4D0T2 115 aa12.13□□□□□ -0.47
CHCHD3-203ENST00000448878 IGKV2D-40P01614 121 aaPredicted RBP12.13□□□□□ -0.47
CHCHD3-203ENST00000448878 DEDD2Q8WXF8 326 aa12.13□□□□□ -0.47
CHCHD3-203ENST00000448878 FAM19A4Q96LR4 140 aa12.13□□□□□ -0.47
CHCHD3-203ENST00000448878 SRRQ9GZT4 340 aa12.13□□□□□ -0.47
CHCHD3-203ENST00000448878 AAMDCQ9H7C9 122 aa12.13□□□□□ -0.47
CHCHD3-203ENST00000448878 PLA2G1BP04054 148 aaKnown RBP12.12□□□□□ -0.47
CHCHD3-203ENST00000448878 HIST1H1EP10412 219 aaKnown RBP12.12□□□□□ -0.47
CHCHD3-203ENST00000448878 MUC21Q5SSG8 566 aa12.12□□□□□ -0.47
CHCHD3-203ENST00000448878 PRR9Q5T870 116 aa12.12□□□□□ -0.47
CHCHD3-203ENST00000448878 FAM122CQ6P4D5 195 aa12.12□□□□□ -0.47
CHCHD3-203ENST00000448878 NTN5Q8WTR8 489 aaPredicted RBP12.12□□□□□ -0.47
CHCHD3-203ENST00000448878 ZNF479Q96JC4 524 aa12.12□□□□□ -0.47
CHCHD3-203ENST00000448878 TXNDC17Q9BRA2 123 aa12.12□□□□□ -0.47
CHCHD3-203ENST00000448878 CST7O76096 145 aa12.11□□□□□ -0.47
CHCHD3-203ENST00000448878 MBPP02686 304 aaPredicted RBP12.11□□□□□ -0.47
CHCHD3-203ENST00000448878 ORM1P02763 201 aa12.11□□□□□ -0.47
CHCHD3-203ENST00000448878 PYYP10082 97 aa12.11□□□□□ -0.47
CHCHD3-203ENST00000448878 CRISP2P16562 243 aa12.11□□□□□ -0.47
CHCHD3-203ENST00000448878 CAV2P51636 162 aa12.11□□□□□ -0.47
CHCHD3-203ENST00000448878 BCL7BQ9BQE9 202 aa12.11□□□□□ -0.47
CHCHD3-203ENST00000448878 Q9HAA7 133 aa12.11□□□□□ -0.47
CHCHD3-203ENST00000448878 FAM30AQ9NZY2 134 aa12.11□□□□□ -0.47
CHCHD3-203ENST00000448878 LSM5Q9Y4Y9 91 aaKnown RBP12.11□□□□□ -0.47
CHCHD3-203ENST00000448878 V9GYH0 126 aa12.11□□□□□ -0.47
CHCHD3-203ENST00000448878 NDUFB4O95168 129 aa12.1□□□□□ -0.47
CHCHD3-203ENST00000448878 S100A5P33763 92 aa12.1□□□□□ -0.47
CHCHD3-203ENST00000448878 BAXQ07812 192 aa12.1□□□□□ -0.47
CHCHD3-203ENST00000448878 C9orf47Q6ZRZ4 202 aa12.1□□□□□ -0.47
CHCHD3-203ENST00000448878 ZFAND2AQ8N6M9 145 aa12.1□□□□□ -0.47
CHCHD3-203ENST00000448878 C20orf85Q9H1P6 137 aa12.1□□□□□ -0.47
CHCHD3-203ENST00000448878 GPN1Q9HCN4 374 aaPredicted RBP12.1□□□□□ -0.47
CHCHD3-203ENST00000448878 SLC39A9Q9NUM3 307 aa12.1□□□□□ -0.47
CHCHD3-203ENST00000448878 UQCC1Q9NVA1 299 aa12.1□□□□□ -0.47
CHCHD3-203ENST00000448878 LRCOL1A6NCL2 159 aa12.09□□□□□ -0.47
CHCHD3-203ENST00000448878 C9JCJ5 164 aa12.09□□□□□ -0.47
CHCHD3-203ENST00000448878 H3BMQ9 156 aa12.09□□□□□ -0.47
CHCHD3-203ENST00000448878 NDUFB6O95139 128 aa12.09□□□□□ -0.47
CHCHD3-203ENST00000448878 NMBP08949 121 aa12.09□□□□□ -0.47
CHCHD3-203ENST00000448878 ZNF846Q147U1 533 aa12.09□□□□□ -0.47
CHCHD3-203ENST00000448878 Q8N814 137 aa12.09□□□□□ -0.47
CHCHD3-203ENST00000448878 NHLRC2Q8NBF2 726 aa12.09□□□□□ -0.47
CHCHD3-203ENST00000448878 SLC25A31Q9H0C2 315 aa12.09□□□□□ -0.47
CHCHD3-203ENST00000448878 ZNF492Q9P255 531 aa12.09□□□□□ -0.47
CHCHD3-203ENST00000448878 IGHV3-38A0A0C4DH36 116 aa12.08□□□□□ -0.48
CHCHD3-203ENST00000448878 UBE2L5PA0A1B0GUS4 154 aa12.08□□□□□ -0.48
CHCHD3-203ENST00000448878 FAM25EA8MYX2 175 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms