RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 A8MWL6 223 aa11.48□□□□□ -0.57
SF1-211ENST00000448404 H0Y8G0 127 aa11.48□□□□□ -0.57
SF1-211ENST00000448404 HBBP68871 147 aa11.48□□□□□ -0.57
SF1-211ENST00000448404 PSG3Q16557 428 aa11.48□□□□□ -0.57
SF1-211ENST00000448404 KLHDC1Q8N7A1 406 aa11.48□□□□□ -0.57
SF1-211ENST00000448404 IGHV3-11P01762 117 aa11.47□□□□□ -0.57
SF1-211ENST00000448404 ATP5J2P56134 94 aa11.47□□□□□ -0.57
SF1-211ENST00000448404 FXYD7P58549 80 aa11.47□□□□□ -0.57
SF1-211ENST00000448404 SRSF8Q9BRL6 282 aaKnown RBP11.47□□□□□ -0.57
SF1-211ENST00000448404 AVPP01185 164 aa11.47□□□□□ -0.57
SF1-211ENST00000448404 PPIFP30405 207 aaKnown RBP11.47□□□□□ -0.57
SF1-211ENST00000448404 IGKV3-7A0A075B6H7 116 aa11.46□□□□□ -0.57
SF1-211ENST00000448404 TMEM213A2RRL7 107 aa11.46□□□□□ -0.57
SF1-211ENST00000448404 HSBP1O75506 76 aa11.46□□□□□ -0.57
SF1-211ENST00000448404 EBLN2Q6P2I7 272 aa11.46□□□□□ -0.57
SF1-211ENST00000448404 PIFOQ8TCI5 191 aa11.46□□□□□ -0.57
SF1-211ENST00000448404 BORCS7Q96B45 105 aa11.46□□□□□ -0.57
SF1-211ENST00000448404 CHEK1O14757 476 aa11.46□□□□□ -0.58
SF1-211ENST00000448404 OR10J3Q5JRS4 329 aa11.46□□□□□ -0.58
SF1-211ENST00000448404 RBPMS2Q6ZRY4 209 aaKnown RBP11.46□□□□□ -0.58
SF1-211ENST00000448404 BLCAPP62952 87 aa11.45□□□□□ -0.58
SF1-211ENST00000448404 TMEM95Q3KNT9 176 aa11.45□□□□□ -0.58
SF1-211ENST00000448404 ZNF502Q8TBZ5 544 aa11.45□□□□□ -0.58
SF1-211ENST00000448404 THYN1Q9P016 225 aa11.45□□□□□ -0.58
SF1-211ENST00000448404 J3KRW8 73 aa11.45□□□□□ -0.58
SF1-211ENST00000448404 M0R2Z0 102 aa11.45□□□□□ -0.58
SF1-211ENST00000448404 C5orf56Q8N8D9 126 aa11.45□□□□□ -0.58
SF1-211ENST00000448404 AAMDCQ9H7C9 122 aa11.45□□□□□ -0.58
SF1-211ENST00000448404 RABAC1Q9UI14 185 aa11.45□□□□□ -0.58
SF1-211ENST00000448404 SPRY2O43597 315 aa11.45□□□□□ -0.58
SF1-211ENST00000448404 PMCHL2Q9BQD1 86 aa11.45□□□□□ -0.58
SF1-211ENST00000448404 MRPS16Q9Y3D3 137 aaKnown RBP11.45□□□□□ -0.58
SF1-211ENST00000448404 CLPSL1A2RUU4 121 aa11.44□□□□□ -0.58
SF1-211ENST00000448404 FAM106AQ4KMX7 169 aa11.44□□□□□ -0.58
SF1-211ENST00000448404 WIPF2Q8TF74 440 aaPredicted RBP11.44□□□□□ -0.58
SF1-211ENST00000448404 BBC3Q96PG8 261 aaPredicted RBP11.44□□□□□ -0.58
SF1-211ENST00000448404 NF1P21359 2839 aa11.44□□□□□ -0.58
SF1-211ENST00000448404 SERTM2A0A1B0GWG4 89 aa11.44□□□□□ -0.58
SF1-211ENST00000448404 SMIM15Q7Z3B0 74 aa11.44□□□□□ -0.58
SF1-211ENST00000448404 KLK15Q9H2R5 256 aa11.44□□□□□ -0.58
SF1-211ENST00000448404 TRAV30A0A087WSZ9 112 aa11.43□□□□□ -0.58
SF1-211ENST00000448404 NPIPB6E9PJ23 425 aa11.43□□□□□ -0.58
SF1-211ENST00000448404 SH2D1AO60880 128 aa11.43□□□□□ -0.58
SF1-211ENST00000448404 IGLL1P15814 213 aa11.43□□□□□ -0.58
SF1-211ENST00000448404 FAM110DQ8TAY7 271 aaPredicted RBP11.43□□□□□ -0.58
SF1-211ENST00000448404 CST9LQ9H4G1 147 aa11.43□□□□□ -0.58
SF1-211ENST00000448404 ZFAND3Q9H8U3 227 aa11.43□□□□□ -0.58
SF1-211ENST00000448404 ZNF492Q9P255 531 aa11.43□□□□□ -0.58
SF1-211ENST00000448404 SMKR1H3BMG3 65 aa11.43□□□□□ -0.58
SF1-211ENST00000448404 H3BUX3 64 aa11.43□□□□□ -0.58
SF1-211ENST00000448404 EDN2P20800 178 aa11.43□□□□□ -0.58
SF1-211ENST00000448404 MSRB1Q9NZV6 116 aa11.43□□□□□ -0.58
SF1-211ENST00000448404 LOC389332A0A1B0GUA5 103 aa11.42□□□□□ -0.58
SF1-211ENST00000448404 OOSP1A8MZH6 123 aa11.42□□□□□ -0.58
SF1-211ENST00000448404 OCIAD2Q56VL3 154 aa11.42□□□□□ -0.58
SF1-211ENST00000448404 LYZL1Q6UWQ5 148 aa11.42□□□□□ -0.58
SF1-211ENST00000448404 UNQ9165/PRO28630Q6UXU0 137 aa11.42□□□□□ -0.58
SF1-211ENST00000448404 PPBPP02775 128 aa11.42□□□□□ -0.58
SF1-211ENST00000448404 IGHV1-69DA0A0B4J2H0 117 aa11.41□□□□□ -0.58
SF1-211ENST00000448404 GAS8-AS1O95177 125 aa11.41□□□□□ -0.58
SF1-211ENST00000448404 IGHV1-69P01742 117 aa11.41□□□□□ -0.58
SF1-211ENST00000448404 MPV17L2Q567V2 206 aa11.41□□□□□ -0.58
SF1-211ENST00000448404 FAM181BA6NEQ2 426 aa11.41□□□□□ -0.58
SF1-211ENST00000448404 RPL7P18124 248 aaKnown RBP11.41□□□□□ -0.58
SF1-211ENST00000448404 TCTAP57738 103 aa11.41□□□□□ -0.58
SF1-211ENST00000448404 PAX8Q06710 450 aa11.41□□□□□ -0.58
SF1-211ENST00000448404 C10orf99Q6UWK7 81 aa11.41□□□□□ -0.58
SF1-211ENST00000448404 C10orf105Q8TEF2 133 aa11.41□□□□□ -0.58
SF1-211ENST00000448404 K7EQM0 130 aa11.4□□□□□ -0.58
SF1-211ENST00000448404 BUB3O43684 328 aa11.4□□□□□ -0.58
SF1-211ENST00000448404 IGF1P05019 195 aa11.4□□□□□ -0.58
SF1-211ENST00000448404 CSN1S1P47710 185 aa11.4□□□□□ -0.58
SF1-211ENST00000448404 HIST2H2BDQ6DRA6 164 aa11.4□□□□□ -0.58
SF1-211ENST00000448404 IL17RELQ6ZVW7 336 aa11.4□□□□□ -0.58
SF1-211ENST00000448404 AMN1Q8IY45 258 aa11.4□□□□□ -0.58
SF1-211ENST00000448404 PRR25Q96S07 402 aa11.4□□□□□ -0.58
SF1-211ENST00000448404 TRAV9-2A0A087WT02 112 aa11.4□□□□□ -0.58
SF1-211ENST00000448404 A0A1B0GUT8 65 aa11.4□□□□□ -0.58
SF1-211ENST00000448404 TRGV3P03979 118 aa11.4□□□□□ -0.58
SF1-211ENST00000448404 CT45A10P0DMU9 189 aa11.4□□□□□ -0.58
SF1-211ENST00000448404 LOXL1Q08397 574 aaPredicted RBP11.4□□□□□ -0.58
SF1-211ENST00000448404 PIMREGQ9BSJ6 248 aa11.4□□□□□ -0.58
SF1-211ENST00000448404 NCR2O95944 276 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 SRD5A1P18405 259 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 ZNF575Q86XF7 245 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 HIF1ANQ9NWT6 349 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 ACANP16112 2415 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 TRAV41A0A0B4J266 112 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 IGHV1-24A0A0C4DH33 117 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 AMMECR1LQ6DCA0 310 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 CSTL1Q9H114 145 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 TMEM189A5PLL7 270 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 ORM1P02763 201 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 COX19Q49B96 90 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 CLEC2AQ6UVW9 174 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 ATP5L2Q7Z4Y8 100 aa11.39□□□□□ -0.59
SF1-211ENST00000448404 SMAD7O15105 426 aaKnown RBP11.38□□□□□ -0.59
SF1-211ENST00000448404 C16orf54Q6UWD8 224 aa11.38□□□□□ -0.59
SF1-211ENST00000448404 SMIM12Q96EX1 92 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms