RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 CDKN1BP46527 198 aa9.62□□□□□ -0.87
SNHG4-201ENST00000448190 LYPD1Q8N2G4 141 aa9.62□□□□□ -0.87
SNHG4-201ENST00000448190 LINC00477Q96M19 166 aa9.62□□□□□ -0.87
SNHG4-201ENST00000448190 C11orf68Q9H3H3 251 aaKnown RBP9.62□□□□□ -0.87
SNHG4-201ENST00000448190 OTORQ9NRC9 128 aa9.62□□□□□ -0.87
SNHG4-201ENST00000448190 CELA1Q9UNI1 258 aa9.62□□□□□ -0.87
SNHG4-201ENST00000448190 PLECQ15149 4684 aaKnown RBP9.61□□□□□ -0.87
SNHG4-201ENST00000448190 DYNC2H1Q8NCM8 4307 aaKnown RBP9.61□□□□□ -0.87
SNHG4-201ENST00000448190 CXorf1O96002 111 aa9.61□□□□□ -0.87
SNHG4-201ENST00000448190 HBE1P02100 147 aa9.61□□□□□ -0.87
SNHG4-201ENST00000448190 TSPOP30536 169 aa9.61□□□□□ -0.87
SNHG4-201ENST00000448190 RNASE4P34096 147 aaKnown RBP9.61□□□□□ -0.87
SNHG4-201ENST00000448190 LEPP41159 167 aa9.61□□□□□ -0.87
SNHG4-201ENST00000448190 GNG5P63218 68 aa9.61□□□□□ -0.87
SNHG4-201ENST00000448190 RRN3P1Q2M238 152 aa9.61□□□□□ -0.87
SNHG4-201ENST00000448190 TMEM78Q5T7P6 136 aa9.61□□□□□ -0.87
SNHG4-201ENST00000448190 GFI1BQ5VTD9 330 aa9.61□□□□□ -0.87
SNHG4-201ENST00000448190 Q8TAT8 98 aa9.61□□□□□ -0.87
SNHG4-201ENST00000448190 CSMD3Q7Z407 3707 aa9.6□□□□□ -0.87
SNHG4-201ENST00000448190 CTXND1A0A1B0GTU2 59 aa9.6□□□□□ -0.87
SNHG4-201ENST00000448190 LOC102723971A0A1B0GUV8 181 aa9.6□□□□□ -0.87
SNHG4-201ENST00000448190 A0A1B0GV50 99 aa9.6□□□□□ -0.87
SNHG4-201ENST00000448190 SMIM9A6NGZ8 99 aa9.6□□□□□ -0.87
SNHG4-201ENST00000448190 DIRC3C9JPN6 131 aa9.6□□□□□ -0.87
SNHG4-201ENST00000448190 SLC25A5P05141 298 aaKnown RBP9.6□□□□□ -0.87
SNHG4-201ENST00000448190 UBE2G2P60604 165 aa9.6□□□□□ -0.87
SNHG4-201ENST00000448190 SUMO1P63165 101 aaKnown RBP9.6□□□□□ -0.87
SNHG4-201ENST00000448190 Q6ZQT7 251 aa9.6□□□□□ -0.87
SNHG4-201ENST00000448190 C9orf47Q6ZRZ4 202 aa9.6□□□□□ -0.87
SNHG4-201ENST00000448190 CMTM2Q8TAZ6 248 aa9.6□□□□□ -0.87
SNHG4-201ENST00000448190 TMED6Q8WW62 240 aa9.6□□□□□ -0.87
SNHG4-201ENST00000448190 SGK494Q96LW2 274 aa9.6□□□□□ -0.87
SNHG4-201ENST00000448190 NEU1Q99519 415 aa9.6□□□□□ -0.87
SNHG4-201ENST00000448190 GPX1P07203 203 aa9.59□□□□□ -0.87
SNHG4-201ENST00000448190 SEC11BP0C7V7 166 aa9.59□□□□□ -0.87
SNHG4-201ENST00000448190 ZNF138P52744 262 aa9.59□□□□□ -0.87
SNHG4-201ENST00000448190 BTN1A1Q13410 526 aa9.59□□□□□ -0.87
SNHG4-201ENST00000448190 GOLT1AQ6ZVE7 132 aa9.59□□□□□ -0.87
SNHG4-201ENST00000448190 FAM213BQ8TBF2 198 aa9.59□□□□□ -0.87
SNHG4-201ENST00000448190 SUN5Q8TC36 379 aa9.59□□□□□ -0.87
SNHG4-201ENST00000448190 RXFP4Q8TDU9 374 aa9.59□□□□□ -0.87
SNHG4-201ENST00000448190 PHLDA1Q8WV24 401 aaPredicted RBP9.59□□□□□ -0.87
SNHG4-201ENST00000448190 TMEM167BQ9NRX6 74 aa9.59□□□□□ -0.87
SNHG4-201ENST00000448190 ZNF492Q9P255 531 aa9.59□□□□□ -0.87
SNHG4-201ENST00000448190 SACSQ9NZJ4 4579 aa9.59□□□□□ -0.87
SNHG4-201ENST00000448190 TENM2Q9NT68 2774 aa9.59□□□□□ -0.87
SNHG4-201ENST00000448190 MAP1LC3B2A6NCE7 125 aa9.58□□□□□ -0.88
SNHG4-201ENST00000448190 C12orf74Q32Q52 190 aa9.58□□□□□ -0.88
SNHG4-201ENST00000448190 FAM74A1Q5RGS3 127 aa9.58□□□□□ -0.88
SNHG4-201ENST00000448190 PRR9Q5T870 116 aa9.58□□□□□ -0.88
SNHG4-201ENST00000448190 SFT2D1Q8WV19 159 aa9.58□□□□□ -0.88
SNHG4-201ENST00000448190 FAM19A4Q96LR4 140 aa9.58□□□□□ -0.88
SNHG4-201ENST00000448190 MAP1LC3BQ9GZQ8 125 aa9.58□□□□□ -0.88
SNHG4-201ENST00000448190 YTHDF2Q9Y5A9 579 aaKnown RBP9.58□□□□□ -0.88
SNHG4-201ENST00000448190 TRAV8-1A0A0A6YYK1 113 aa9.57□□□□□ -0.88
SNHG4-201ENST00000448190 C7orf71A4D174 169 aa9.57□□□□□ -0.88
SNHG4-201ENST00000448190 TPT1P13693 172 aaKnown RBP9.57□□□□□ -0.88
SNHG4-201ENST00000448190 NKX2-5P52952 324 aaPredicted RBP9.57□□□□□ -0.88
SNHG4-201ENST00000448190 EIF5AP63241 154 aaKnown RBP9.57□□□□□ -0.88
SNHG4-201ENST00000448190 FAM222AQ5U5X8 452 aa9.57□□□□□ -0.88
SNHG4-201ENST00000448190 CEMP1Q6PRD7 247 aaPredicted RBP9.57□□□□□ -0.88
SNHG4-201ENST00000448190 Q6ZTC4 211 aa9.57□□□□□ -0.88
SNHG4-201ENST00000448190 ODF3Q96PU9 254 aa9.57□□□□□ -0.88
SNHG4-201ENST00000448190 TMEM189A5PLL7 270 aa9.56□□□□□ -0.88
SNHG4-201ENST00000448190 GGTLC3B5MD39 225 aa9.56□□□□□ -0.88
SNHG4-201ENST00000448190 H7BYZ3 331 aa9.56□□□□□ -0.88
SNHG4-201ENST00000448190 ZNF324O75467 553 aaPredicted RBP9.56□□□□□ -0.88
SNHG4-201ENST00000448190 SPART-AS1P0CW21 52 aa9.56□□□□□ -0.88
SNHG4-201ENST00000448190 TAS2R60P59551 318 aa9.56□□□□□ -0.88
SNHG4-201ENST00000448190 ZFP69Q49AA0 526 aa9.56□□□□□ -0.88
SNHG4-201ENST00000448190 TMEM256Q8N2U0 113 aa9.56□□□□□ -0.88
SNHG4-201ENST00000448190 C9orf62Q8N4C0 152 aa9.56□□□□□ -0.88
SNHG4-201ENST00000448190 ZFAND2AQ8N6M9 145 aa9.56□□□□□ -0.88
SNHG4-201ENST00000448190 NIPSNAP3BQ9BS92 247 aa9.56□□□□□ -0.88
SNHG4-201ENST00000448190 DKK2Q9UBU2 259 aa9.56□□□□□ -0.88
SNHG4-201ENST00000448190 EPDR1Q9UM22 224 aa9.56□□□□□ -0.88
SNHG4-201ENST00000448190 RBAKDNA6NC62 111 aa9.55□□□□□ -0.88
SNHG4-201ENST00000448190 KLLNB2CW77 178 aa9.55□□□□□ -0.88
SNHG4-201ENST00000448190 UMAD1C9J7I0 102 aa9.55□□□□□ -0.88
SNHG4-201ENST00000448190 IFNA7P01567 189 aa9.55□□□□□ -0.88
SNHG4-201ENST00000448190 CRISP2P16562 243 aa9.55□□□□□ -0.88
SNHG4-201ENST00000448190 STOML3Q8TAV4 291 aa9.55□□□□□ -0.88
SNHG4-201ENST00000448190 TVP23CQ96ET8 276 aa9.55□□□□□ -0.88
SNHG4-201ENST00000448190 LINC00479Q96M42 142 aa9.55□□□□□ -0.88
SNHG4-201ENST00000448190 BOLA1Q9Y3E2 137 aa9.55□□□□□ -0.88
SNHG4-201ENST00000448190 DNAH1Q9P2D7 4330 aa9.55□□□□□ -0.88
SNHG4-201ENST00000448190 TRAV34A0A0B4J273 112 aa9.54□□□□□ -0.88
SNHG4-201ENST00000448190 A0A1W2PRE2 83 aa9.54□□□□□ -0.88
SNHG4-201ENST00000448190 TCRAP04437 139 aa9.54□□□□□ -0.88
SNHG4-201ENST00000448190 CST9LP1Q5W188 147 aa9.54□□□□□ -0.88
SNHG4-201ENST00000448190 CCDC28AQ8IWP9 274 aa9.54□□□□□ -0.88
SNHG4-201ENST00000448190 C5orf17Q8NAS9 161 aa9.54□□□□□ -0.88
SNHG4-201ENST00000448190 MBD3L1Q8WWY6 194 aa9.54□□□□□ -0.88
SNHG4-201ENST00000448190 RYR3Q15413 4870 aa9.54□□□□□ -0.88
SNHG4-201ENST00000448190 PLAC8L1A1L4L8 177 aa9.53□□□□□ -0.88
SNHG4-201ENST00000448190 NUPR2A6NF83 97 aa9.53□□□□□ -0.88
SNHG4-201ENST00000448190 FAM74A7A6NL05 159 aa9.53□□□□□ -0.88
SNHG4-201ENST00000448190 IGLL5B9A064 214 aa9.53□□□□□ -0.88
SNHG4-201ENST00000448190 H2AFB1P0C5Y9 115 aa9.53□□□□□ -0.88
SNHG4-201ENST00000448190 DEFB130BP0DP73 79 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms