RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 LINC00322Q6ZN03 302 aaPredicted RBP18.61■□□□□ 0.57
RFFL-206ENST00000447669 CD33P20138 364 aa18.61■□□□□ 0.57
RFFL-206ENST00000447669 MLST8Q9BVC4 326 aa18.61■□□□□ 0.57
RFFL-206ENST00000447669 ID1P41134 155 aa18.59■□□□□ 0.57
RFFL-206ENST00000447669 MRPL53Q96EL3 112 aaKnown RBP18.59■□□□□ 0.57
RFFL-206ENST00000447669 GCGP01275 180 aa18.59■□□□□ 0.57
RFFL-206ENST00000447669 PAFAH1B2P68402 229 aa18.59■□□□□ 0.57
RFFL-206ENST00000447669 ZNF124Q15973 351 aa18.59■□□□□ 0.57
RFFL-206ENST00000447669 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.59■□□□□ 0.57
RFFL-206ENST00000447669 SFRP2Q96HF1 295 aa18.59■□□□□ 0.57
RFFL-206ENST00000447669 LY96Q9Y6Y9 160 aa18.59■□□□□ 0.57
RFFL-206ENST00000447669 S100A9P06702 114 aaKnown RBP18.58■□□□□ 0.56
RFFL-206ENST00000447669 ZC2HC1AQ96GY0 325 aa18.58■□□□□ 0.56
RFFL-206ENST00000447669 SIGLEC8Q9NYZ4 499 aa18.58■□□□□ 0.56
RFFL-206ENST00000447669 HIST1H1AQ02539 215 aaPredicted RBP18.57■□□□□ 0.56
RFFL-206ENST00000447669 ARL6IP6Q8N6S5 226 aa18.57■□□□□ 0.56
RFFL-206ENST00000447669 SERTM2A0A1B0GWG4 89 aa18.57■□□□□ 0.56
RFFL-206ENST00000447669 ERVFC1-1P60608 527 aa18.57■□□□□ 0.56
RFFL-206ENST00000447669 TMEM183AQ8IXX5 376 aa18.57■□□□□ 0.56
RFFL-206ENST00000447669 PRR25Q96S07 402 aa18.57■□□□□ 0.56
RFFL-206ENST00000447669 CLEC5AQ9NY25 188 aa18.57■□□□□ 0.56
RFFL-206ENST00000447669 B4DEV8 164 aa18.56■□□□□ 0.56
RFFL-206ENST00000447669 SNRPD3P62318 126 aaKnown RBP18.56■□□□□ 0.56
RFFL-206ENST00000447669 C3orf56Q8N813 242 aa18.56■□□□□ 0.56
RFFL-206ENST00000447669 ZNF256Q9Y2P7 627 aaPredicted RBP18.56■□□□□ 0.56
RFFL-206ENST00000447669 URGCP-MRPS24S4R325 110 aa18.56■□□□□ 0.56
RFFL-206ENST00000447669 OR8A1Q8NGG7 326 aa18.56■□□□□ 0.56
RFFL-206ENST00000447669 TRBV6-1A0A0K0K1D8 114 aa18.55■□□□□ 0.56
RFFL-206ENST00000447669 RBAKDNA6NC62 111 aa18.55■□□□□ 0.56
RFFL-206ENST00000447669 CRIP1P50238 77 aa18.55■□□□□ 0.56
RFFL-206ENST00000447669 MT-ND4LP03901 98 aa18.54■□□□□ 0.56
RFFL-206ENST00000447669 DEFB131AP59861 70 aa18.54■□□□□ 0.56
RFFL-206ENST00000447669 C9orf47Q6ZRZ4 202 aa18.54■□□□□ 0.56
RFFL-206ENST00000447669 ZNF747Q9BV97 191 aa18.54■□□□□ 0.56
RFFL-206ENST00000447669 J3KRW8 73 aa18.54■□□□□ 0.56
RFFL-206ENST00000447669 IGKV3-20P01619 116 aa18.54■□□□□ 0.56
RFFL-206ENST00000447669 IGLV1-51P01701 117 aa18.54■□□□□ 0.56
RFFL-206ENST00000447669 CT45A10P0DMU9 189 aa18.54■□□□□ 0.56
RFFL-206ENST00000447669 TMEM78Q5T7P6 136 aa18.54■□□□□ 0.56
RFFL-206ENST00000447669 OR10J6PQ8NGY7 276 aa18.54■□□□□ 0.56
RFFL-206ENST00000447669 ZFP30Q9Y2G7 519 aa18.54■□□□□ 0.56
RFFL-206ENST00000447669 A0A087WWC5 75 aa18.53■□□□□ 0.56
RFFL-206ENST00000447669 CA1P00915 261 aaPredicted RBP18.53■□□□□ 0.56
RFFL-206ENST00000447669 ZNF80P51504 273 aaPredicted RBP18.53■□□□□ 0.56
RFFL-206ENST00000447669 Q6ZQT7 251 aa18.53■□□□□ 0.56
RFFL-206ENST00000447669 OR10G8Q8NGN5 311 aa18.53■□□□□ 0.56
RFFL-206ENST00000447669 ZNF492Q9P255 531 aa18.53■□□□□ 0.56
RFFL-206ENST00000447669 ZNF138P52744 262 aa18.52■□□□□ 0.56
RFFL-206ENST00000447669 IBA57Q5T440 356 aaKnown RBP18.52■□□□□ 0.56
RFFL-206ENST00000447669 C12orf54Q6X4T0 127 aa18.52■□□□□ 0.56
RFFL-206ENST00000447669 APRG1Q8IVJ8 170 aa18.52■□□□□ 0.56
RFFL-206ENST00000447669 NUDT10Q8NFP7 164 aa18.52■□□□□ 0.56
RFFL-206ENST00000447669 NUDT11Q96G61 164 aa18.52■□□□□ 0.56
RFFL-206ENST00000447669 KNCNA6PVL3 124 aa18.52■□□□□ 0.55
RFFL-206ENST00000447669 H7BYZ3 331 aa18.51■□□□□ 0.55
RFFL-206ENST00000447669 KIR3DS1Q14943 382 aa18.51■□□□□ 0.55
RFFL-206ENST00000447669 SAMD13Q5VXD3 122 aa18.51■□□□□ 0.55
RFFL-206ENST00000447669 TMEM158Q8WZ71 300 aa18.51■□□□□ 0.55
RFFL-206ENST00000447669 SPAG8Q99932 426 aaPredicted RBP18.51■□□□□ 0.55
RFFL-206ENST00000447669 NPIPB6E9PJ23 425 aa18.5■□□□□ 0.55
RFFL-206ENST00000447669 MAP6D1Q9H9H5 199 aa18.5■□□□□ 0.55
RFFL-206ENST00000447669 V9GYV3 84 aa18.5■□□□□ 0.55
RFFL-206ENST00000447669 SMCO4Q9NRQ5 59 aa18.5■□□□□ 0.55
RFFL-206ENST00000447669 PRR9Q5T870 116 aa18.49■□□□□ 0.55
RFFL-206ENST00000447669 ANAPC16Q96DE5 110 aa18.49■□□□□ 0.55
RFFL-206ENST00000447669 TRAV25A0A0B4J276 109 aa18.49■□□□□ 0.55
RFFL-206ENST00000447669 A0A0J9YX75 114 aa18.49■□□□□ 0.55
RFFL-206ENST00000447669 SAPCD1Q5SSQ6 148 aa18.49■□□□□ 0.55
RFFL-206ENST00000447669 OR4B1Q8NGF8 309 aa18.49■□□□□ 0.55
RFFL-206ENST00000447669 SMIM12Q96EX1 92 aa18.49■□□□□ 0.55
RFFL-206ENST00000447669 C19orf71A6NCJ1 209 aa18.48■□□□□ 0.55
RFFL-206ENST00000447669 OR4C46A6NHA9 309 aa18.48■□□□□ 0.55
RFFL-206ENST00000447669 ZNF705GA8MUZ8 300 aaPredicted RBP18.48■□□□□ 0.55
RFFL-206ENST00000447669 FAM3BP58499 235 aaPredicted RBP18.48■□□□□ 0.55
RFFL-206ENST00000447669 RPL19P84098 196 aaKnown RBP18.48■□□□□ 0.55
RFFL-206ENST00000447669 ODF3L2Q3SX64 289 aa18.48■□□□□ 0.55
RFFL-206ENST00000447669 ACTL10Q5JWF8 245 aa18.48■□□□□ 0.55
RFFL-206ENST00000447669 LINC00477Q96M19 166 aa18.47■□□□□ 0.55
RFFL-206ENST00000447669 CTDSP1Q9GZU7 261 aa18.47■□□□□ 0.55
RFFL-206ENST00000447669 OSTCQ9NRP0 149 aa18.47■□□□□ 0.55
RFFL-206ENST00000447669 TRAV2A0A0B4J234 112 aa18.47■□□□□ 0.55
RFFL-206ENST00000447669 SAV1Q9H4B6 383 aaPredicted RBP18.47■□□□□ 0.55
RFFL-206ENST00000447669 CD7P09564 240 aa18.46■□□□□ 0.55
RFFL-206ENST00000447669 C15orf54Q8N8G6 183 aa18.46■□□□□ 0.55
RFFL-206ENST00000447669 NDFIP1Q9BT67 221 aa18.46■□□□□ 0.55
RFFL-206ENST00000447669 TMEM242Q9NWH2 141 aa18.46■□□□□ 0.55
RFFL-206ENST00000447669 PKD1L1Q8TDX9 2849 aa18.46■□□□□ 0.55
RFFL-206ENST00000447669 EBLN2Q6P2I7 272 aa18.45■□□□□ 0.54
RFFL-206ENST00000447669 WFDC10AQ9H1F0 79 aa18.45■□□□□ 0.54
RFFL-206ENST00000447669 FBLL1A6NHQ2 334 aaKnown RBP18.45■□□□□ 0.54
RFFL-206ENST00000447669 SH2D1AO60880 128 aa18.45■□□□□ 0.54
RFFL-206ENST00000447669 IGLL1P15814 213 aa18.45■□□□□ 0.54
RFFL-206ENST00000447669 TCL1AP56279 114 aa18.45■□□□□ 0.54
RFFL-206ENST00000447669 SMUG1Q53HV7 270 aa18.45■□□□□ 0.54
RFFL-206ENST00000447669 DAZAP1Q96EP5 407 aaKnown RBP18.45■□□□□ 0.54
RFFL-206ENST00000447669 YPEL4Q96NS1 127 aa18.45■□□□□ 0.54
RFFL-206ENST00000447669 TGIF2-C20orf24A0A0A6YYL0 155 aa18.44■□□□□ 0.54
RFFL-206ENST00000447669 GATCO43716 136 aaKnown RBP18.44■□□□□ 0.54
RFFL-206ENST00000447669 ELOBQ15370 118 aa18.44■□□□□ 0.54
RFFL-206ENST00000447669 FAM231DQ6ZW35 169 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms