RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 ZNF705EA8MWA4 302 aaPredicted RBP9.64□□□□□ -0.87
HLA-DOB-207ENST00000447394 CSN1S1P47710 185 aa9.64□□□□□ -0.87
HLA-DOB-207ENST00000447394 NUTF2P61970 127 aaKnown RBP9.64□□□□□ -0.87
HLA-DOB-207ENST00000447394 CMTM2Q8TAZ6 248 aa9.64□□□□□ -0.87
HLA-DOB-207ENST00000447394 PPP1R14DQ9NXH3 145 aa9.64□□□□□ -0.87
HLA-DOB-207ENST00000447394 PAGE4O60829 102 aa9.63□□□□□ -0.87
HLA-DOB-207ENST00000447394 RAB5CP51148 216 aa9.63□□□□□ -0.87
HLA-DOB-207ENST00000447394 PRR9Q5T870 116 aa9.63□□□□□ -0.87
HLA-DOB-207ENST00000447394 C1orf158Q8N1D5 194 aa9.63□□□□□ -0.87
HLA-DOB-207ENST00000447394 OR11H2Q8NH07 326 aa9.63□□□□□ -0.87
HLA-DOB-207ENST00000447394 PCNPQ8WW12 178 aaKnown RBP9.63□□□□□ -0.87
HLA-DOB-207ENST00000447394 A0A1W2PRE2 83 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 DEFB4AO15263 64 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 TCRAP04437 139 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 PRM2P04554 102 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 GFI1BQ5VTD9 330 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 CST9LP1Q5W188 147 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 Q6ZQT7 251 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 C9orf47Q6ZRZ4 202 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 C5orf17Q8NAS9 161 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 RXFP4Q8TDU9 374 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 FAM19A4Q96LR4 140 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 GNG13Q9P2W3 67 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 TP53TG1Q9Y2A0 90 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 X6R8D5 127 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 DNAH7Q8WXX0 4024 aa9.62□□□□□ -0.87
HLA-DOB-207ENST00000447394 STAB2Q8WWQ8 2551 aa9.61□□□□□ -0.87
HLA-DOB-207ENST00000447394 INSP01308 110 aa9.61□□□□□ -0.87
HLA-DOB-207ENST00000447394 IFNA7P01567 189 aa9.61□□□□□ -0.87
HLA-DOB-207ENST00000447394 BTN1A1Q13410 526 aa9.61□□□□□ -0.87
HLA-DOB-207ENST00000447394 TMEM78Q5T7P6 136 aa9.61□□□□□ -0.87
HLA-DOB-207ENST00000447394 IGF2BP2-AS1Q96M15 143 aa9.61□□□□□ -0.87
HLA-DOB-207ENST00000447394 LINC00479Q96M42 142 aa9.61□□□□□ -0.87
HLA-DOB-207ENST00000447394 RARRES2Q99969 163 aa9.61□□□□□ -0.87
HLA-DOB-207ENST00000447394 C1QTNF4Q9BXJ3 329 aa9.61□□□□□ -0.87
HLA-DOB-207ENST00000447394 EPDR1Q9UM22 224 aa9.61□□□□□ -0.87
HLA-DOB-207ENST00000447394 TRAV1-1A0A0B4J248 108 aa9.6□□□□□ -0.87
HLA-DOB-207ENST00000447394 TRAV34A0A0B4J273 112 aa9.6□□□□□ -0.87
HLA-DOB-207ENST00000447394 A0A0J9YWU9 116 aa9.6□□□□□ -0.87
HLA-DOB-207ENST00000447394 RBAKDNA6NC62 111 aa9.6□□□□□ -0.87
HLA-DOB-207ENST00000447394 LEPP41159 167 aa9.6□□□□□ -0.87
HLA-DOB-207ENST00000447394 CDKN1BP46527 198 aa9.6□□□□□ -0.87
HLA-DOB-207ENST00000447394 ZNF138P52744 262 aa9.6□□□□□ -0.87
HLA-DOB-207ENST00000447394 ZNF705AQ6ZN79 300 aaPredicted RBP9.6□□□□□ -0.87
HLA-DOB-207ENST00000447394 ZFAND2AQ8N6M9 145 aa9.6□□□□□ -0.87
HLA-DOB-207ENST00000447394 TVP23CQ96ET8 276 aa9.6□□□□□ -0.87
HLA-DOB-207ENST00000447394 LINC00477Q96M19 166 aa9.6□□□□□ -0.87
HLA-DOB-207ENST00000447394 ZNF492Q9P255 531 aa9.6□□□□□ -0.87
HLA-DOB-207ENST00000447394 TRAV12-3A0A0B4J271 114 aa9.59□□□□□ -0.87
HLA-DOB-207ENST00000447394 IGHV4-28A0A0C4DH34 117 aa9.59□□□□□ -0.87
HLA-DOB-207ENST00000447394 F6UZH7 168 aa9.59□□□□□ -0.87
HLA-DOB-207ENST00000447394 PEX7O00628 323 aa9.59□□□□□ -0.87
HLA-DOB-207ENST00000447394 IGLV2-11P01706 119 aa9.59□□□□□ -0.87
HLA-DOB-207ENST00000447394 CCDC28AQ8IWP9 274 aa9.59□□□□□ -0.87
HLA-DOB-207ENST00000447394 Q8NAQ8 132 aa9.59□□□□□ -0.87
HLA-DOB-207ENST00000447394 ODF3Q96PU9 254 aa9.59□□□□□ -0.87
HLA-DOB-207ENST00000447394 ATG101Q9BSB4 218 aa9.59□□□□□ -0.87
HLA-DOB-207ENST00000447394 SCO2A0A1W2PP80 73 aa9.58□□□□□ -0.88
HLA-DOB-207ENST00000447394 ZNF705GA8MUZ8 300 aaPredicted RBP9.58□□□□□ -0.88
HLA-DOB-207ENST00000447394 KLLNB2CW77 178 aa9.58□□□□□ -0.88
HLA-DOB-207ENST00000447394 TEX46H3BTG2 121 aa9.58□□□□□ -0.88
HLA-DOB-207ENST00000447394 HBE1P02100 147 aa9.58□□□□□ -0.88
HLA-DOB-207ENST00000447394 AMBPP02760 352 aa9.58□□□□□ -0.88
HLA-DOB-207ENST00000447394 RNASE4P34096 147 aaKnown RBP9.58□□□□□ -0.88
HLA-DOB-207ENST00000447394 TEX261Q6UWH6 196 aa9.58□□□□□ -0.88
HLA-DOB-207ENST00000447394 PRNTQ86SH4 94 aa9.58□□□□□ -0.88
HLA-DOB-207ENST00000447394 CYB561D1Q8N8Q1 229 aa9.58□□□□□ -0.88
HLA-DOB-207ENST00000447394 C8orf49Q96NF6 230 aa9.58□□□□□ -0.88
HLA-DOB-207ENST00000447394 EDA2RQ9HAV5 297 aa9.58□□□□□ -0.88
HLA-DOB-207ENST00000447394 GOLT1BQ9Y3E0 138 aa9.58□□□□□ -0.88
HLA-DOB-207ENST00000447394 C7orf71A4D174 169 aa9.57□□□□□ -0.88
HLA-DOB-207ENST00000447394 C11orf94C9JXX5 98 aa9.57□□□□□ -0.88
HLA-DOB-207ENST00000447394 CRISP2P16562 243 aa9.57□□□□□ -0.88
HLA-DOB-207ENST00000447394 TSPOP30536 169 aa9.57□□□□□ -0.88
HLA-DOB-207ENST00000447394 ZNF680Q8NEM1 530 aa9.57□□□□□ -0.88
HLA-DOB-207ENST00000447394 TMEM208Q9BTX3 173 aa9.57□□□□□ -0.88
HLA-DOB-207ENST00000447394 MANBALQ9NQG1 85 aa9.57□□□□□ -0.88
HLA-DOB-207ENST00000447394 PSG8Q9UQ74 426 aa9.57□□□□□ -0.88
HLA-DOB-207ENST00000447394 ARL2-SNX15V9GYD0 113 aa9.57□□□□□ -0.88
HLA-DOB-207ENST00000447394 GPX1P07203 203 aa9.56□□□□□ -0.88
HLA-DOB-207ENST00000447394 HTN1P15515 57 aa9.56□□□□□ -0.88
HLA-DOB-207ENST00000447394 AZU1P20160 251 aa9.56□□□□□ -0.88
HLA-DOB-207ENST00000447394 BLOC1S1P78537 153 aa9.56□□□□□ -0.88
HLA-DOB-207ENST00000447394 FLI1Q01543 452 aaPredicted RBP9.56□□□□□ -0.88
HLA-DOB-207ENST00000447394 Q86TA4 180 aa9.56□□□□□ -0.88
HLA-DOB-207ENST00000447394 ARL6IP6Q8N6S5 226 aa9.56□□□□□ -0.88
HLA-DOB-207ENST00000447394 TMEM75Q8N9X5 138 aa9.56□□□□□ -0.88
HLA-DOB-207ENST00000447394 LINC01587Q99440 93 aa9.56□□□□□ -0.88
HLA-DOB-207ENST00000447394 BCL2P10415 239 aa9.55□□□□□ -0.88
HLA-DOB-207ENST00000447394 PPT1P50897 306 aa9.55□□□□□ -0.88
HLA-DOB-207ENST00000447394 EMP1P54849 157 aa9.55□□□□□ -0.88
HLA-DOB-207ENST00000447394 DERL1Q9BUN8 251 aa9.55□□□□□ -0.88
HLA-DOB-207ENST00000447394 NKX6-2Q9C056 277 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOB-207ENST00000447394 CELA1Q9UNI1 258 aa9.55□□□□□ -0.88
HLA-DOB-207ENST00000447394 LOC102723971A0A1B0GUV8 181 aa9.54□□□□□ -0.88
HLA-DOB-207ENST00000447394 SERTM2A0A1B0GWG4 89 aa9.54□□□□□ -0.88
HLA-DOB-207ENST00000447394 K7EQM0 130 aa9.54□□□□□ -0.88
HLA-DOB-207ENST00000447394 ZNF324O75467 553 aaPredicted RBP9.54□□□□□ -0.88
HLA-DOB-207ENST00000447394 MIFP14174 115 aa9.54□□□□□ -0.88
HLA-DOB-207ENST00000447394 AKR1C3P42330 323 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms