RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TMEM256Q8N2U0 113 aa10.58□□□□□ -0.72
HDAC4-204ENST00000446876 OR11H4Q8NGC9 324 aa10.58□□□□□ -0.72
HDAC4-204ENST00000446876 Q8TAT8 98 aa10.58□□□□□ -0.72
HDAC4-204ENST00000446876 RAB24Q969Q5 203 aa10.58□□□□□ -0.72
HDAC4-204ENST00000446876 CYTL1Q9NRR1 136 aa10.58□□□□□ -0.72
HDAC4-204ENST00000446876 PLAC8L1A1L4L8 177 aa10.57□□□□□ -0.72
HDAC4-204ENST00000446876 TAS2R60P59551 318 aa10.57□□□□□ -0.72
HDAC4-204ENST00000446876 BTN1A1Q13410 526 aa10.57□□□□□ -0.72
HDAC4-204ENST00000446876 C9orf47Q6ZRZ4 202 aa10.57□□□□□ -0.72
HDAC4-204ENST00000446876 FAM19A4Q96LR4 140 aa10.57□□□□□ -0.72
HDAC4-204ENST00000446876 HYLS1Q96M11 299 aa10.57□□□□□ -0.72
HDAC4-204ENST00000446876 LINC00477Q96M19 166 aa10.57□□□□□ -0.72
HDAC4-204ENST00000446876 NIPSNAP3BQ9BS92 247 aa10.57□□□□□ -0.72
HDAC4-204ENST00000446876 RPH3ALQ9UNE2 315 aa10.57□□□□□ -0.72
HDAC4-204ENST00000446876 DEFB131BA0A096LNP1 70 aa10.56□□□□□ -0.72
HDAC4-204ENST00000446876 H7BYZ3 331 aa10.56□□□□□ -0.72
HDAC4-204ENST00000446876 LY6G6CO95867 125 aa10.56□□□□□ -0.72
HDAC4-204ENST00000446876 STAG3L2P0CL84 134 aa10.56□□□□□ -0.72
HDAC4-204ENST00000446876 STAG3L3P0CL85 134 aa10.56□□□□□ -0.72
HDAC4-204ENST00000446876 CSN1S1P47710 185 aa10.56□□□□□ -0.72
HDAC4-204ENST00000446876 SERF2P84101 59 aa10.56□□□□□ -0.72
HDAC4-204ENST00000446876 CD300CQ08708 224 aa10.56□□□□□ -0.72
HDAC4-204ENST00000446876 TMEM78Q5T7P6 136 aa10.56□□□□□ -0.72
HDAC4-204ENST00000446876 PRR9Q5T870 116 aa10.56□□□□□ -0.72
HDAC4-204ENST00000446876 LYPD1Q8N2G4 141 aa10.56□□□□□ -0.72
HDAC4-204ENST00000446876 GNPNAT1Q96EK6 184 aaPredicted RBP10.56□□□□□ -0.72
HDAC4-204ENST00000446876 C7orf71A4D174 169 aa10.55□□□□□ -0.72
HDAC4-204ENST00000446876 PGPA6NDG6 321 aa10.55□□□□□ -0.72
HDAC4-204ENST00000446876 KLLNB2CW77 178 aa10.55□□□□□ -0.72
HDAC4-204ENST00000446876 MBP02144 154 aa10.55□□□□□ -0.72
HDAC4-204ENST00000446876 HTN3P15516 51 aa10.55□□□□□ -0.72
HDAC4-204ENST00000446876 GCHFRP30047 84 aa10.55□□□□□ -0.72
HDAC4-204ENST00000446876 RNASE4P34096 147 aaKnown RBP10.55□□□□□ -0.72
HDAC4-204ENST00000446876 ZNF726P1Q15940 193 aa10.55□□□□□ -0.72
HDAC4-204ENST00000446876 Q6ZQT7 251 aa10.55□□□□□ -0.72
HDAC4-204ENST00000446876 ZFAND2AQ8N6M9 145 aa10.55□□□□□ -0.72
HDAC4-204ENST00000446876 C20orf144Q9BQM9 153 aa10.55□□□□□ -0.72
HDAC4-204ENST00000446876 OTORQ9NRC9 128 aa10.55□□□□□ -0.72
HDAC4-204ENST00000446876 ZNF492Q9P255 531 aa10.55□□□□□ -0.72
HDAC4-204ENST00000446876 IGHV4-4A0A075B6R2 117 aa10.54□□□□□ -0.72
HDAC4-204ENST00000446876 TEX48A0A1B0GUV7 120 aa10.54□□□□□ -0.72
HDAC4-204ENST00000446876 DIRC3C9JPN6 131 aa10.54□□□□□ -0.72
HDAC4-204ENST00000446876 TAAR5O14804 337 aa10.54□□□□□ -0.72
HDAC4-204ENST00000446876 SLC25A5P05141 298 aaKnown RBP10.54□□□□□ -0.72
HDAC4-204ENST00000446876 CRISP2P16562 243 aa10.54□□□□□ -0.72
HDAC4-204ENST00000446876 ZNF138P52744 262 aa10.54□□□□□ -0.72
HDAC4-204ENST00000446876 DAD1P61803 113 aa10.54□□□□□ -0.72
HDAC4-204ENST00000446876 GNG5P63218 68 aa10.54□□□□□ -0.72
HDAC4-204ENST00000446876 KCNRGQ8N5I3 272 aa10.54□□□□□ -0.72
HDAC4-204ENST00000446876 RNASE8Q8TDE3 154 aaKnown RBP10.54□□□□□ -0.72
HDAC4-204ENST00000446876 C16orf74Q96GX8 76 aa10.54□□□□□ -0.72
HDAC4-204ENST00000446876 ACTR3CQ9C0K3 210 aaPredicted RBP10.54□□□□□ -0.72
HDAC4-204ENST00000446876 APLNQ9ULZ1 77 aa10.54□□□□□ -0.72
HDAC4-204ENST00000446876 GPX1P07203 203 aa10.53□□□□□ -0.72
HDAC4-204ENST00000446876 DEFB130BP0DP73 79 aa10.53□□□□□ -0.72
HDAC4-204ENST00000446876 DEFB130AP0DP74 79 aa10.53□□□□□ -0.72
HDAC4-204ENST00000446876 ZNF345Q14585 488 aa10.53□□□□□ -0.72
HDAC4-204ENST00000446876 IQCF2Q8IXL9 164 aa10.53□□□□□ -0.72
HDAC4-204ENST00000446876 TMEM263Q8WUH6 116 aaKnown RBP10.53□□□□□ -0.72
HDAC4-204ENST00000446876 ARPC5LQ9BPX5 153 aa10.53□□□□□ -0.72
HDAC4-204ENST00000446876 RBAKDNA6NC62 111 aa10.52□□□□□ -0.73
HDAC4-204ENST00000446876 LYRM9A8MSI8 78 aa10.52□□□□□ -0.73
HDAC4-204ENST00000446876 HMSDA8MTL9 139 aa10.52□□□□□ -0.73
HDAC4-204ENST00000446876 AKR1C8PQ5T2L2 129 aa10.52□□□□□ -0.73
HDAC4-204ENST00000446876 Q6ZNX1 250 aa10.52□□□□□ -0.73
HDAC4-204ENST00000446876 GOLT1AQ6ZVE7 132 aa10.52□□□□□ -0.73
HDAC4-204ENST00000446876 CMTM2Q8TAZ6 248 aa10.52□□□□□ -0.73
HDAC4-204ENST00000446876 RXFP4Q8TDU9 374 aa10.52□□□□□ -0.73
HDAC4-204ENST00000446876 ST6GAL2Q96JF0 529 aa10.52□□□□□ -0.73
HDAC4-204ENST00000446876 NOP10Q9NPE3 64 aaKnown RBP10.52□□□□□ -0.73
HDAC4-204ENST00000446876 TRAV8-1A0A0A6YYK1 113 aa10.51□□□□□ -0.73
HDAC4-204ENST00000446876 CTXND1A0A1B0GTU2 59 aa10.51□□□□□ -0.73
HDAC4-204ENST00000446876 ZNF324O75467 553 aaPredicted RBP10.51□□□□□ -0.73
HDAC4-204ENST00000446876 CXorf1O96002 111 aa10.51□□□□□ -0.73
HDAC4-204ENST00000446876 FGF8P55075 233 aaPredicted RBP10.51□□□□□ -0.73
HDAC4-204ENST00000446876 FAM74A1Q5RGS3 127 aa10.51□□□□□ -0.73
HDAC4-204ENST00000446876 ZNF493Q6ZR52 646 aa10.51□□□□□ -0.73
HDAC4-204ENST00000446876 CCDC28AQ8IWP9 274 aa10.51□□□□□ -0.73
HDAC4-204ENST00000446876 SUN5Q8TC36 379 aa10.51□□□□□ -0.73
HDAC4-204ENST00000446876 PYGO2Q9BRQ0 406 aa10.51□□□□□ -0.73
HDAC4-204ENST00000446876 TMPRSS5Q9H3S3 457 aa10.51□□□□□ -0.73
HDAC4-204ENST00000446876 TIMM8BQ9Y5J9 83 aaPredicted RBP10.51□□□□□ -0.73
HDAC4-204ENST00000446876 hCG_2014768A0A024R1R8 64 aa10.5□□□□□ -0.73
HDAC4-204ENST00000446876 BCL2L11O43521 198 aa10.5□□□□□ -0.73
HDAC4-204ENST00000446876 SGK494Q96LW2 274 aa10.5□□□□□ -0.73
HDAC4-204ENST00000446876 ZNF471Q9BX82 626 aaPredicted RBP10.5□□□□□ -0.73
HDAC4-204ENST00000446876 VPS13DQ5THJ4 4388 aa10.5□□□□□ -0.73
HDAC4-204ENST00000446876 A0A0D9SG52 128 aa10.49□□□□□ -0.73
HDAC4-204ENST00000446876 GGTLC3B5MD39 225 aa10.49□□□□□ -0.73
HDAC4-204ENST00000446876 NMBP08949 121 aa10.49□□□□□ -0.73
HDAC4-204ENST00000446876 TCTAP57738 103 aa10.49□□□□□ -0.73
HDAC4-204ENST00000446876 LGALS9CQ6DKI2 356 aa10.49□□□□□ -0.73
HDAC4-204ENST00000446876 TMEM167BQ9NRX6 74 aa10.49□□□□□ -0.73
HDAC4-204ENST00000446876 TP53TG3Q9ULZ0 132 aa10.49□□□□□ -0.73
HDAC4-204ENST00000446876 KMT2AQ03164 3969 aa10.49□□□□□ -0.73
HDAC4-204ENST00000446876 KANTRA0A1W2PQU2 76 aa10.48□□□□□ -0.73
HDAC4-204ENST00000446876 CBY3A6NI87 242 aa10.48□□□□□ -0.73
HDAC4-204ENST00000446876 SNURFLB1AK76 121 aa10.48□□□□□ -0.73
HDAC4-204ENST00000446876 RGS13O14921 159 aa10.48□□□□□ -0.73
HDAC4-204ENST00000446876 FHITP49789 147 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 225.1 ms