RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 TRPT1Q86TN4 253 aaKnown RBP12.83□□□□□ -0.35
SGCE-206ENST00000445866 DNAH3Q8TD57 4116 aa12.83□□□□□ -0.36
SGCE-206ENST00000445866 RBMY1BA6NDE4 496 aaKnown RBP12.83□□□□□ -0.36
SGCE-206ENST00000445866 RBMY1EA6NEQ0 496 aaKnown RBP12.83□□□□□ -0.36
SGCE-206ENST00000445866 RBMY1DP0C7P1 496 aaKnown RBP12.83□□□□□ -0.36
SGCE-206ENST00000445866 CT45A10P0DMU9 189 aa12.83□□□□□ -0.36
SGCE-206ENST00000445866 SRSF3P84103 164 aaKnown RBP12.83□□□□□ -0.36
SGCE-206ENST00000445866 LOC102724200A0A096LPH7 203 aaPredicted RBP12.82□□□□□ -0.36
SGCE-206ENST00000445866 ZNF138P52744 262 aa12.82□□□□□ -0.36
SGCE-206ENST00000445866 AKR1C3P42330 323 aa12.81□□□□□ -0.36
SGCE-206ENST00000445866 CEBPGP53567 150 aa12.81□□□□□ -0.36
SGCE-206ENST00000445866 NUTF2P61970 127 aaKnown RBP12.81□□□□□ -0.36
SGCE-206ENST00000445866 PRNTQ86SH4 94 aa12.81□□□□□ -0.36
SGCE-206ENST00000445866 CLUHP3Q96NS8 147 aa12.81□□□□□ -0.36
SGCE-206ENST00000445866 PSG8Q9UQ74 426 aa12.81□□□□□ -0.36
SGCE-206ENST00000445866 KLF12Q9Y4X4 402 aa12.81□□□□□ -0.36
SGCE-206ENST00000445866 RAB19A4D1S5 217 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 A8MZ25 164 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 FXYD7P58549 80 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 UBE2G1P62253 170 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 FLI1Q01543 452 aaPredicted RBP12.8□□□□□ -0.36
SGCE-206ENST00000445866 TMEM75Q8N9X5 138 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 Q8TAT8 98 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 C2CD4CQ8TF44 421 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 C11orf52Q96A22 123 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 ASCL2Q99929 193 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 CSTL1Q9H114 145 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 SLC35B3Q9H1N7 401 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 TREM1Q9NP99 234 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 ZNF492Q9P255 531 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 IGLV2-11P01706 119 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 S100A9P06702 114 aaKnown RBP12.8□□□□□ -0.36
SGCE-206ENST00000445866 AMTNQ6UX39 209 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 FMC1Q96HJ9 113 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 SMDT1Q9H4I9 107 aa12.8□□□□□ -0.36
SGCE-206ENST00000445866 LINC00862A6NCI5 91 aa12.79□□□□□ -0.36
SGCE-206ENST00000445866 FBLL1A6NHQ2 334 aaKnown RBP12.79□□□□□ -0.36
SGCE-206ENST00000445866 A8MTW9 85 aa12.79□□□□□ -0.36
SGCE-206ENST00000445866 C9JQL5 133 aa12.79□□□□□ -0.36
SGCE-206ENST00000445866 TMEM250H0YL14 139 aa12.79□□□□□ -0.36
SGCE-206ENST00000445866 SRP19P09132 144 aaKnown RBP12.79□□□□□ -0.36
SGCE-206ENST00000445866 RPL35P42766 123 aaKnown RBP12.79□□□□□ -0.36
SGCE-206ENST00000445866 DEFA6Q01524 100 aa12.79□□□□□ -0.36
SGCE-206ENST00000445866 TMEM183BQ1AE95 376 aa12.79□□□□□ -0.36
SGCE-206ENST00000445866 DERL1Q9BUN8 251 aa12.79□□□□□ -0.36
SGCE-206ENST00000445866 M0R2Z0 102 aa12.78□□□□□ -0.36
SGCE-206ENST00000445866 FRMD6-AS1P0C7T7 363 aa12.78□□□□□ -0.36
SGCE-206ENST00000445866 TSPOP30536 169 aa12.78□□□□□ -0.36
SGCE-206ENST00000445866 MORN3Q6PF18 240 aaPredicted RBP12.78□□□□□ -0.36
SGCE-206ENST00000445866 J3KRW8 73 aa12.77□□□□□ -0.36
SGCE-206ENST00000445866 LEPP41159 167 aa12.77□□□□□ -0.36
SGCE-206ENST00000445866 APOC4P55056 127 aa12.77□□□□□ -0.36
SGCE-206ENST00000445866 SPINK13Q1W4C9 94 aa12.77□□□□□ -0.36
SGCE-206ENST00000445866 ZNF674Q2M3X9 581 aa12.77□□□□□ -0.36
SGCE-206ENST00000445866 LINC00322Q6ZN03 302 aaPredicted RBP12.77□□□□□ -0.36
SGCE-206ENST00000445866 COMMD7Q86VX2 200 aa12.77□□□□□ -0.36
SGCE-206ENST00000445866 MRAPQ8TCY5 172 aa12.77□□□□□ -0.36
SGCE-206ENST00000445866 NDFIP1Q9BT67 221 aa12.77□□□□□ -0.36
SGCE-206ENST00000445866 XCL2Q9UBD3 114 aa12.77□□□□□ -0.36
SGCE-206ENST00000445866 KIR2DL5BA0A0G2JN68 375 aa12.77□□□□□ -0.37
SGCE-206ENST00000445866 KIR2DL5BA0A0G2JPC4 375 aa12.77□□□□□ -0.37
SGCE-206ENST00000445866 NDUFS6O75380 124 aaKnown RBP12.77□□□□□ -0.37
SGCE-206ENST00000445866 TAS2R60P59551 318 aa12.77□□□□□ -0.37
SGCE-206ENST00000445866 SAPCD1Q5SSQ6 148 aa12.77□□□□□ -0.37
SGCE-206ENST00000445866 BAGE2Q86Y30 109 aa12.77□□□□□ -0.37
SGCE-206ENST00000445866 KIR2DL5AQ8N109 375 aa12.77□□□□□ -0.37
SGCE-206ENST00000445866 KIR2DL5BQ8NHK3 375 aa12.77□□□□□ -0.37
SGCE-206ENST00000445866 TVP23CQ96ET8 276 aa12.77□□□□□ -0.37
SGCE-206ENST00000445866 ODF3Q96PU9 254 aa12.77□□□□□ -0.37
SGCE-206ENST00000445866 LENEPQ9Y5L5 61 aa12.77□□□□□ -0.37
SGCE-206ENST00000445866 CA1P00915 261 aaPredicted RBP12.76□□□□□ -0.37
SGCE-206ENST00000445866 GPX1P07203 203 aa12.76□□□□□ -0.37
SGCE-206ENST00000445866 CDKN1BP46527 198 aa12.76□□□□□ -0.37
SGCE-206ENST00000445866 FAM19A4Q96LR4 140 aa12.76□□□□□ -0.37
SGCE-206ENST00000445866 ZFP30Q9Y2G7 519 aa12.76□□□□□ -0.37
SGCE-206ENST00000445866 TRAV12-2A0A075B6T6 113 aa12.75□□□□□ -0.37
SGCE-206ENST00000445866 TRBV7-9A0A0J9YWB2 115 aa12.75□□□□□ -0.37
SGCE-206ENST00000445866 TRBV6-1A0A0K0K1D8 114 aa12.75□□□□□ -0.37
SGCE-206ENST00000445866 GIG44P09565 113 aaPredicted RBP12.75□□□□□ -0.37
SGCE-206ENST00000445866 RNASE4P34096 147 aaKnown RBP12.75□□□□□ -0.37
SGCE-206ENST00000445866 KIR3DS1Q14943 382 aa12.75□□□□□ -0.37
SGCE-206ENST00000445866 LTAP01374 205 aa12.74□□□□□ -0.37
SGCE-206ENST00000445866 AMBPP02760 352 aa12.74□□□□□ -0.37
SGCE-206ENST00000445866 CRISP2P16562 243 aa12.74□□□□□ -0.37
SGCE-206ENST00000445866 Q86TA4 180 aa12.74□□□□□ -0.37
SGCE-206ENST00000445866 C1QTNF4Q9BXJ3 329 aa12.74□□□□□ -0.37
SGCE-206ENST00000445866 PARLQ9H300 379 aa12.74□□□□□ -0.37
SGCE-206ENST00000445866 UBE2CO00762 179 aa12.73□□□□□ -0.37
SGCE-206ENST00000445866 GNG4P50150 75 aa12.73□□□□□ -0.37
SGCE-206ENST00000445866 UQCC3Q6UW78 93 aa12.73□□□□□ -0.37
SGCE-206ENST00000445866 ZFAND2AQ8N6M9 145 aa12.73□□□□□ -0.37
SGCE-206ENST00000445866 SMUG1Q53HV7 270 aa12.73□□□□□ -0.37
SGCE-206ENST00000445866 CENPWQ5EE01 88 aa12.73□□□□□ -0.37
SGCE-206ENST00000445866 SOHLH1Q5JUK2 328 aa12.73□□□□□ -0.37
SGCE-206ENST00000445866 C8orf49Q96NF6 230 aa12.73□□□□□ -0.37
SGCE-206ENST00000445866 SMIM7Q9BQ49 75 aa12.73□□□□□ -0.37
SGCE-206ENST00000445866 ZNF727A8MUV8 499 aa12.72□□□□□ -0.37
SGCE-206ENST00000445866 EIF4E3Q8N5X7 224 aaKnown RBP12.72□□□□□ -0.37
SGCE-206ENST00000445866 NHLRC2Q8NBF2 726 aa12.72□□□□□ -0.37
SGCE-206ENST00000445866 IGF2BP2-AS1Q96M15 143 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms