RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 HIST1H4GQ99525 98 aa9.2□□□□□ -0.94
HCFC1-203ENST00000444191 PSMB11A5LHX3 300 aa9.2□□□□□ -0.94
HCFC1-203ENST00000444191 MRPL51Q4U2R6 128 aaKnown RBP9.2□□□□□ -0.94
HCFC1-203ENST00000444191 FAM169BQ8N8A8 192 aa9.2□□□□□ -0.94
HCFC1-203ENST00000444191 SHANK2-AS3Q9BTD1 123 aa9.2□□□□□ -0.94
HCFC1-203ENST00000444191 CENPEQ02224 2701 aa9.2□□□□□ -0.94
HCFC1-203ENST00000444191 B9A039 149 aa9.2□□□□□ -0.94
HCFC1-203ENST00000444191 THBDP07204 575 aa9.2□□□□□ -0.94
HCFC1-203ENST00000444191 SMAGPQ0VAQ4 97 aa9.2□□□□□ -0.94
HCFC1-203ENST00000444191 TMEM78Q5T7P6 136 aa9.2□□□□□ -0.94
HCFC1-203ENST00000444191 C1RLQ9NZP8 487 aa9.2□□□□□ -0.94
HCFC1-203ENST00000444191 A0A1B0GXF2 115 aa9.19□□□□□ -0.94
HCFC1-203ENST00000444191 FAM71F2Q6NXP2 309 aa9.19□□□□□ -0.94
HCFC1-203ENST00000444191 ZNF491Q8N8L2 437 aa9.19□□□□□ -0.94
HCFC1-203ENST00000444191 GTSF1LQ9H1H1 148 aa9.19□□□□□ -0.94
HCFC1-203ENST00000444191 COL25A1Q9BXS0 654 aaPredicted RBP9.19□□□□□ -0.94
HCFC1-203ENST00000444191 CD5LO43866 347 aa9.19□□□□□ -0.94
HCFC1-203ENST00000444191 IGKV3-20P01619 116 aa9.19□□□□□ -0.94
HCFC1-203ENST00000444191 ZC2HC1BQ5TFG8 222 aa9.19□□□□□ -0.94
HCFC1-203ENST00000444191 C16orf92Q96LL3 132 aa9.19□□□□□ -0.94
HCFC1-203ENST00000444191 ZNF492Q9P255 531 aa9.19□□□□□ -0.94
HCFC1-203ENST00000444191 LOC107984156A0A0G2JMH3 177 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 SMIM13P0DJ93 91 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 SRD5A1P18405 259 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 SAMD13Q5VXD3 122 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 C16orf54Q6UWD8 224 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 TMEM219Q86XT9 240 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 ARL17AQ8IVW1 177 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 NUP37Q8NFH4 326 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 MS4A6AQ9H2W1 248 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 CHTOPQ9Y3Y2 248 aaKnown RBP9.18□□□□□ -0.94
HCFC1-203ENST00000444191 HAX1O00165 279 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 IGHV3-11P01762 117 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 SRSF9Q13242 221 aaKnown RBP eCLIP9.18□□□□□ -0.94
HCFC1-203ENST00000444191 MLST8Q9BVC4 326 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 CCDC168Q8NDH2 2452 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 TNRC6BQ9UPQ9 1833 aaKnown RBP9.18□□□□□ -0.94
HCFC1-203ENST00000444191 COX8AP10176 69 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 EGR2P11161 476 aaPredicted RBP9.18□□□□□ -0.94
HCFC1-203ENST00000444191 EMP1P54849 157 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 LY6EQ16553 131 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 C15orf32Q32M92 178 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 FAM104BQ5XKR9 115 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 DEFB125Q8N687 156 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 TMEM158Q8WZ71 300 aa9.18□□□□□ -0.94
HCFC1-203ENST00000444191 C19orf71A6NCJ1 209 aa9.17□□□□□ -0.94
HCFC1-203ENST00000444191 FOXE3Q13461 319 aa9.17□□□□□ -0.94
HCFC1-203ENST00000444191 POLQO75417 2590 aa9.17□□□□□ -0.94
HCFC1-203ENST00000444191 HIVEP3Q5T1R4 2406 aa9.17□□□□□ -0.94
HCFC1-203ENST00000444191 FABP5P3A8MUU1 101 aa9.17□□□□□ -0.94
HCFC1-203ENST00000444191 H3BVH4 76 aa9.17□□□□□ -0.94
HCFC1-203ENST00000444191 PVRIGQ6DKI7 326 aa9.17□□□□□ -0.94
HCFC1-203ENST00000444191 H7C2G1 150 aa9.17□□□□□ -0.94
HCFC1-203ENST00000444191 K7EIM0 57 aa9.17□□□□□ -0.94
HCFC1-203ENST00000444191 NDUFS7O75251 213 aa9.17□□□□□ -0.94
HCFC1-203ENST00000444191 SIGLEC15Q6ZMC9 328 aa9.17□□□□□ -0.94
HCFC1-203ENST00000444191 SCRT2Q9NQ03 307 aa9.17□□□□□ -0.94
HCFC1-203ENST00000444191 JKAMPQ9P055 326 aa9.17□□□□□ -0.94
HCFC1-203ENST00000444191 G3V318 75 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 FCN3O75636 299 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 GFRA4Q9GZZ7 299 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 KLF12Q9Y4X4 402 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 RAI1Q7Z5J4 1906 aaPredicted RBP9.16□□□□□ -0.94
HCFC1-203ENST00000444191 COL12A1Q99715 3063 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 TRAV40A0A0B4J280 105 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 TEX22C9J3V5 150 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 SMAD7O15105 426 aaKnown RBP9.16□□□□□ -0.94
HCFC1-203ENST00000444191 DLX6P56179 175 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 PAX2Q02962 417 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 C5orf64Q2M2E5 130 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 CT83Q5H943 113 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 SAMD5Q5TGI4 173 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 IL17RELQ6ZVW7 336 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 PRSS22Q9GZN4 317 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 IGFL2Q6UWQ7 119 aa9.16□□□□□ -0.94
HCFC1-203ENST00000444191 I3L2K1 104 aa9.15□□□□□ -0.94
HCFC1-203ENST00000444191 PRR25Q96S07 402 aa9.15□□□□□ -0.94
HCFC1-203ENST00000444191 CRIP1P50238 77 aa9.15□□□□□ -0.94
HCFC1-203ENST00000444191 EFNA4P52798 201 aa9.15□□□□□ -0.94
HCFC1-203ENST00000444191 DEFB1P60022 68 aa9.15□□□□□ -0.94
HCFC1-203ENST00000444191 SEC11AP67812 179 aa9.15□□□□□ -0.94
HCFC1-203ENST00000444191 FAM74A4Q5TZK3 123 aa9.15□□□□□ -0.94
HCFC1-203ENST00000444191 Q6AWC8 147 aa9.15□□□□□ -0.94
HCFC1-203ENST00000444191 AMTNQ6UX39 209 aa9.15□□□□□ -0.94
HCFC1-203ENST00000444191 ASH1LQ9NR48 2969 aaKnown RBP9.15□□□□□ -0.94
HCFC1-203ENST00000444191 GAS8-AS1O95177 125 aa9.14□□□□□ -0.95
HCFC1-203ENST00000444191 VKORC1Q9BQB6 163 aa9.14□□□□□ -0.95
HCFC1-203ENST00000444191 SCGB1C2P0DMR2 95 aa9.14□□□□□ -0.95
HCFC1-203ENST00000444191 JMJD8Q96S16 334 aa9.14□□□□□ -0.95
HCFC1-203ENST00000444191 PRAC2D3DTV9 90 aa9.14□□□□□ -0.95
HCFC1-203ENST00000444191 H3BRN7 92 aa9.14□□□□□ -0.95
HCFC1-203ENST00000444191 TNFRSF6BO95407 300 aa9.14□□□□□ -0.95
HCFC1-203ENST00000444191 APOMO95445 188 aa9.14□□□□□ -0.95
HCFC1-203ENST00000444191 HSD52Q0P140 79 aa9.14□□□□□ -0.95
HCFC1-203ENST00000444191 PHLDA3Q9Y5J5 127 aa9.14□□□□□ -0.95
HCFC1-203ENST00000444191 MYO18BQ8IUG5 2567 aa9.14□□□□□ -0.95
HCFC1-203ENST00000444191 SHISA9B4DS77 424 aa9.13□□□□□ -0.95
HCFC1-203ENST00000444191 LINC01545Q5VT33 79 aa9.13□□□□□ -0.95
HCFC1-203ENST00000444191 CCDC144NLQ6NUI1 221 aa9.13□□□□□ -0.95
HCFC1-203ENST00000444191 LINC00311Q8N616 119 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms