RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 PPP1R17O96001 155 aa11.08□□□□□ -0.64
SMARCA4-204ENST00000444061 C9orf66Q5T8R8 295 aa11.08□□□□□ -0.64
SMARCA4-204ENST00000444061 MKI67P46013 3256 aaKnown RBP11.07□□□□□ -0.64
SMARCA4-204ENST00000444061 H3BVH4 76 aa11.07□□□□□ -0.64
SMARCA4-204ENST00000444061 SLURP1P55000 103 aa11.07□□□□□ -0.64
SMARCA4-204ENST00000444061 GNB1LQ9BYB4 327 aa11.07□□□□□ -0.64
SMARCA4-204ENST00000444061 SMPXQ9UHP9 88 aa11.07□□□□□ -0.64
SMARCA4-204ENST00000444061 PPIFP30405 207 aaKnown RBP11.07□□□□□ -0.64
SMARCA4-204ENST00000444061 RAB37Q96AX2 223 aa11.07□□□□□ -0.64
SMARCA4-204ENST00000444061 ADCYAP1P18509 176 aa11.07□□□□□ -0.64
SMARCA4-204ENST00000444061 THAP8Q8NA92 274 aa11.07□□□□□ -0.64
SMARCA4-204ENST00000444061 XCL2Q9UBD3 114 aa11.07□□□□□ -0.64
SMARCA4-204ENST00000444061 IGLV11-55A0A075B6I3 123 aa11.06□□□□□ -0.64
SMARCA4-204ENST00000444061 COX6CP09669 75 aa11.06□□□□□ -0.64
SMARCA4-204ENST00000444061 CRIP3Q6Q6R5 217 aa11.06□□□□□ -0.64
SMARCA4-204ENST00000444061 HIST1H4GQ99525 98 aa11.06□□□□□ -0.64
SMARCA4-204ENST00000444061 IGLV2-23P01705 113 aa11.06□□□□□ -0.64
SMARCA4-204ENST00000444061 RNASE7Q9H1E1 156 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-204ENST00000444061 OSTCQ9NRP0 149 aa11.06□□□□□ -0.64
SMARCA4-204ENST00000444061 TMEM89A2RUT3 159 aa11.06□□□□□ -0.64
SMARCA4-204ENST00000444061 C19orf54Q5BKX5 351 aa11.06□□□□□ -0.64
SMARCA4-204ENST00000444061 AJUBAQ96IF1 538 aa11.06□□□□□ -0.64
SMARCA4-204ENST00000444061 RCHY1Q96PM5 261 aa11.06□□□□□ -0.64
SMARCA4-204ENST00000444061 ADMP35318 185 aa11.06□□□□□ -0.64
SMARCA4-204ENST00000444061 ZNF415Q09FC8 603 aa11.06□□□□□ -0.64
SMARCA4-204ENST00000444061 ZNF256Q9Y2P7 627 aaPredicted RBP11.06□□□□□ -0.64
SMARCA4-204ENST00000444061 ZNF324O75467 553 aaPredicted RBP11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 APOC4P55056 127 aa11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 ZNF491Q8N8L2 437 aa11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 ZNF502Q8TBZ5 544 aa11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 FLNBO75369 2602 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 DYNAPQ8N1N2 210 aa11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 H3BRN7 92 aa11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 C10orf91Q5T1B1 145 aa11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 RNF182Q8N6D2 247 aa11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 C5orf30Q96GV9 206 aa11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 CITED2Q99967 270 aaPredicted RBP11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 TRGV1A0A0A0MS02 117 aa11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 TRAV8-1A0A0A6YYK1 113 aa11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 HIGD1CA8MV81 97 aa11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 NDUFS6O75380 124 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 MYCNOSP40205 109 aa11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 OCC1Q8TAD7 63 aa11.05□□□□□ -0.64
SMARCA4-204ENST00000444061 ZNF114Q8NC26 417 aa11.04□□□□□ -0.64
SMARCA4-204ENST00000444061 IGKV3OR2-268A0A0C4DH90 116 aa11.04□□□□□ -0.64
SMARCA4-204ENST00000444061 PGPEP1LA6NFU8 196 aa11.04□□□□□ -0.64
SMARCA4-204ENST00000444061 K7EIM0 57 aa11.04□□□□□ -0.64
SMARCA4-204ENST00000444061 GFI1BQ5VTD9 330 aa11.04□□□□□ -0.64
SMARCA4-204ENST00000444061 OR5A1Q8NGJ0 315 aa11.04□□□□□ -0.64
SMARCA4-204ENST00000444061 ZNF414Q96IQ9 312 aa11.04□□□□□ -0.64
SMARCA4-204ENST00000444061 KLK15Q9H2R5 256 aa11.04□□□□□ -0.64
SMARCA4-204ENST00000444061 LOC107984156A0A0G2JMH3 177 aa11.04□□□□□ -0.64
SMARCA4-204ENST00000444061 HAPLN4Q86UW8 402 aa11.04□□□□□ -0.64
SMARCA4-204ENST00000444061 ARL17AQ8IVW1 177 aa11.04□□□□□ -0.64
SMARCA4-204ENST00000444061 OR9G4Q8NGQ1 327 aa11.04□□□□□ -0.64
SMARCA4-204ENST00000444061 ST20Q9HBF5 79 aa11.04□□□□□ -0.64
SMARCA4-204ENST00000444061 CACNG7P62955 275 aa11.03□□□□□ -0.64
SMARCA4-204ENST00000444061 TTC32Q5I0X7 151 aa11.03□□□□□ -0.64
SMARCA4-204ENST00000444061 TRBV19A0A075B6N1 114 aa11.03□□□□□ -0.64
SMARCA4-204ENST00000444061 SPINK13Q1W4C9 94 aa11.03□□□□□ -0.64
SMARCA4-204ENST00000444061 SPCS1Q9Y6A9 102 aa11.03□□□□□ -0.64
SMARCA4-204ENST00000444061 I3L2K1 104 aa11.03□□□□□ -0.64
SMARCA4-204ENST00000444061 SEC11AP67812 179 aa11.03□□□□□ -0.64
SMARCA4-204ENST00000444061 IGHV4OR15-8A0A075B7B6 117 aa11.02□□□□□ -0.64
SMARCA4-204ENST00000444061 A0A087WW49 117 aa11.02□□□□□ -0.64
SMARCA4-204ENST00000444061 ERCC8Q13216 396 aa11.02□□□□□ -0.64
SMARCA4-204ENST00000444061 UTF1Q5T230 341 aa11.02□□□□□ -0.64
SMARCA4-204ENST00000444061 F2Z2F3 143 aa11.02□□□□□ -0.65
SMARCA4-204ENST00000444061 CA1P00915 261 aaPredicted RBP11.02□□□□□ -0.65
SMARCA4-204ENST00000444061 CRYGCP07315 174 aa11.02□□□□□ -0.65
SMARCA4-204ENST00000444061 TEX22C9J3V5 150 aa11.02□□□□□ -0.65
SMARCA4-204ENST00000444061 PAPPA-AS1Q5QFB9 102 aa11.02□□□□□ -0.65
SMARCA4-204ENST00000444061 PRELID3AQ96N28 172 aa11.02□□□□□ -0.65
SMARCA4-204ENST00000444061 FOXA3P55318 350 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-204ENST00000444061 ARHGAP32A7KAX9 2087 aa11.01□□□□□ -0.65
SMARCA4-204ENST00000444061 KNCNA6PVL3 124 aa11.01□□□□□ -0.65
SMARCA4-204ENST00000444061 IGLV2-14P01704 120 aa11.01□□□□□ -0.65
SMARCA4-204ENST00000444061 TMEM101Q96IK0 257 aa11.01□□□□□ -0.65
SMARCA4-204ENST00000444061 SPAG8Q99932 426 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-204ENST00000444061 ORAOV1Q8WV07 137 aa11.01□□□□□ -0.65
SMARCA4-204ENST00000444061 PSMG3-AS1Q96PY0 264 aa11.01□□□□□ -0.65
SMARCA4-204ENST00000444061 MS4A6AQ9H2W1 248 aa11.01□□□□□ -0.65
SMARCA4-204ENST00000444061 LAMA3Q16787 3333 aa11.01□□□□□ -0.65
SMARCA4-204ENST00000444061 PROP1O75360 226 aa11.01□□□□□ -0.65
SMARCA4-204ENST00000444061 A8MWP6 167 aa11□□□□□ -0.65
SMARCA4-204ENST00000444061 CTSGP08311 255 aa11□□□□□ -0.65
SMARCA4-204ENST00000444061 GP9P14770 177 aa11□□□□□ -0.65
SMARCA4-204ENST00000444061 RASL11AQ6T310 242 aa11□□□□□ -0.65
SMARCA4-204ENST00000444061 CFHR4Q92496 578 aa11□□□□□ -0.65
SMARCA4-204ENST00000444061 CHCHD1Q96BP2 118 aaKnown RBP11□□□□□ -0.65
SMARCA4-204ENST00000444061 TMEM14CQ9P0S9 112 aa11□□□□□ -0.65
SMARCA4-204ENST00000444061 DEFB130BP0DP73 79 aa11□□□□□ -0.65
SMARCA4-204ENST00000444061 DEFB130AP0DP74 79 aa11□□□□□ -0.65
SMARCA4-204ENST00000444061 RIPPLY3P57055 190 aa11□□□□□ -0.65
SMARCA4-204ENST00000444061 SSBP2P81877 361 aaPredicted RBP11□□□□□ -0.65
SMARCA4-204ENST00000444061 UBE2DNLQ8IWF7 75 aa11□□□□□ -0.65
SMARCA4-204ENST00000444061 IL15RAQ13261 267 aa11□□□□□ -0.65
SMARCA4-204ENST00000444061 PRADC1Q9BSG0 188 aa11□□□□□ -0.65
SMARCA4-204ENST00000444061 LY96Q9Y6Y9 160 aa11□□□□□ -0.65
SMARCA4-204ENST00000444061 TNCP24821 2201 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms