RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 RNF212Q495C1 297 aa13.29□□□□□ -0.28
ATPAF2-201ENST00000444058 KHDC3LQ587J8 217 aa13.29□□□□□ -0.28
ATPAF2-201ENST00000444058 TMEM88Q6PEY1 159 aa13.29□□□□□ -0.28
ATPAF2-201ENST00000444058 ZNF503Q96F45 646 aa13.29□□□□□ -0.28
ATPAF2-201ENST00000444058 WFDC1Q9HC57 220 aa13.29□□□□□ -0.28
ATPAF2-201ENST00000444058 DNAH6Q9C0G6 4158 aa13.28□□□□□ -0.28
ATPAF2-201ENST00000444058 TRBV7-9A0A0J9YWB2 115 aa13.28□□□□□ -0.28
ATPAF2-201ENST00000444058 C7orf71A4D174 169 aa13.28□□□□□ -0.28
ATPAF2-201ENST00000444058 ERCC8Q13216 396 aa13.28□□□□□ -0.28
ATPAF2-201ENST00000444058 FCN2Q15485 313 aa13.28□□□□□ -0.28
ATPAF2-201ENST00000444058 TMEM78Q5T7P6 136 aa13.28□□□□□ -0.28
ATPAF2-201ENST00000444058 FAM122CQ6P4D5 195 aa13.28□□□□□ -0.28
ATPAF2-201ENST00000444058 LINC00612Q8N6U2 182 aa13.28□□□□□ -0.28
ATPAF2-201ENST00000444058 LINC00467Q9BRT7 94 aa13.28□□□□□ -0.28
ATPAF2-201ENST00000444058 NOP10Q9NPE3 64 aaKnown RBP13.28□□□□□ -0.28
ATPAF2-201ENST00000444058 RBAKDNA6NC62 111 aa13.27□□□□□ -0.29
ATPAF2-201ENST00000444058 J3KRW8 73 aa13.27□□□□□ -0.29
ATPAF2-201ENST00000444058 M6PRP20645 277 aa13.27□□□□□ -0.29
ATPAF2-201ENST00000444058 UBE2L3P68036 154 aaKnown RBP13.27□□□□□ -0.29
ATPAF2-201ENST00000444058 ZNF266Q14584 549 aa13.27□□□□□ -0.29
ATPAF2-201ENST00000444058 PHYHIPLQ96FC7 376 aa13.27□□□□□ -0.29
ATPAF2-201ENST00000444058 AQP10Q96PS8 301 aa13.27□□□□□ -0.29
ATPAF2-201ENST00000444058 ZNF492Q9P255 531 aa13.27□□□□□ -0.29
ATPAF2-201ENST00000444058 ZNF324O75467 553 aaPredicted RBP13.26□□□□□ -0.29
ATPAF2-201ENST00000444058 CSN1S1P47710 185 aa13.26□□□□□ -0.29
ATPAF2-201ENST00000444058 RANP62826 216 aaKnown RBP13.26□□□□□ -0.29
ATPAF2-201ENST00000444058 DAZ2Q13117 558 aaKnown RBP13.26□□□□□ -0.29
ATPAF2-201ENST00000444058 ACOT6Q3I5F7 207 aaPredicted RBP13.26□□□□□ -0.29
ATPAF2-201ENST00000444058 DNAH10Q8IVF4 4471 aa13.26□□□□□ -0.29
ATPAF2-201ENST00000444058 IGKV2-40A0A087WW87 121 aaPredicted RBP13.25□□□□□ -0.29
ATPAF2-201ENST00000444058 SNURFLB1AK76 121 aa13.25□□□□□ -0.29
ATPAF2-201ENST00000444058 F5H768 121 aa13.25□□□□□ -0.29
ATPAF2-201ENST00000444058 IGKV2D-40P01614 121 aaPredicted RBP13.25□□□□□ -0.29
ATPAF2-201ENST00000444058 GPX1P07203 203 aa13.25□□□□□ -0.29
ATPAF2-201ENST00000444058 GIPP09681 153 aaPredicted RBP13.25□□□□□ -0.29
ATPAF2-201ENST00000444058 ZNF138P52744 262 aa13.25□□□□□ -0.29
ATPAF2-201ENST00000444058 PQLC2Q6ZP29 291 aa13.25□□□□□ -0.29
ATPAF2-201ENST00000444058 ZFAND2AQ8N6M9 145 aa13.25□□□□□ -0.29
ATPAF2-201ENST00000444058 ZNF680Q8NEM1 530 aa13.25□□□□□ -0.29
ATPAF2-201ENST00000444058 RXFP4Q8TDU9 374 aa13.25□□□□□ -0.29
ATPAF2-201ENST00000444058 VGLL1Q99990 258 aa13.25□□□□□ -0.29
ATPAF2-201ENST00000444058 Q9H3A6 140 aa13.25□□□□□ -0.29
ATPAF2-201ENST00000444058 A0A1W2PPV4 95 aa13.24□□□□□ -0.29
ATPAF2-201ENST00000444058 FAM3BP58499 235 aaPredicted RBP13.24□□□□□ -0.29
ATPAF2-201ENST00000444058 CD300CQ08708 224 aa13.24□□□□□ -0.29
ATPAF2-201ENST00000444058 ANXA2RQ3ZCQ2 193 aa13.24□□□□□ -0.29
ATPAF2-201ENST00000444058 UBE2DNLQ8IWF7 75 aa13.24□□□□□ -0.29
ATPAF2-201ENST00000444058 ARL6IP6Q8N6S5 226 aa13.24□□□□□ -0.29
ATPAF2-201ENST00000444058 OR2G3Q8NGZ4 309 aa13.24□□□□□ -0.29
ATPAF2-201ENST00000444058 FRAS1Q86XX4 4008 aa13.24□□□□□ -0.29
ATPAF2-201ENST00000444058 RNASE4P34096 147 aaKnown RBP13.23□□□□□ -0.29
ATPAF2-201ENST00000444058 LGALS9BQ3B8N2 356 aa13.23□□□□□ -0.29
ATPAF2-201ENST00000444058 EIF4E3Q8N5X7 224 aaKnown RBP13.23□□□□□ -0.29
ATPAF2-201ENST00000444058 PSMG3Q9BT73 122 aaPredicted RBP13.23□□□□□ -0.29
ATPAF2-201ENST00000444058 BTN1A1Q13410 526 aa13.22□□□□□ -0.29
ATPAF2-201ENST00000444058 RGS21Q2M5E4 152 aa13.22□□□□□ -0.29
ATPAF2-201ENST00000444058 FAM74A1Q5RGS3 127 aa13.22□□□□□ -0.29
ATPAF2-201ENST00000444058 OR10G4Q8NGN3 311 aa13.22□□□□□ -0.29
ATPAF2-201ENST00000444058 OR10G9Q8NGN4 311 aa13.22□□□□□ -0.29
ATPAF2-201ENST00000444058 OR10G7Q8NGN6 311 aa13.22□□□□□ -0.29
ATPAF2-201ENST00000444058 TMED6Q8WW62 240 aa13.22□□□□□ -0.29
ATPAF2-201ENST00000444058 C18orf15Q96N68 181 aa13.22□□□□□ -0.29
ATPAF2-201ENST00000444058 OTORQ9NRC9 128 aa13.22□□□□□ -0.29
ATPAF2-201ENST00000444058 LENEPQ9Y5L5 61 aa13.22□□□□□ -0.29
ATPAF2-201ENST00000444058 RAB2AP61019 212 aa13.21□□□□□ -0.29
ATPAF2-201ENST00000444058 SERF2P84101 59 aa13.21□□□□□ -0.29
ATPAF2-201ENST00000444058 C11orf72Q8NBR9 251 aa13.21□□□□□ -0.29
ATPAF2-201ENST00000444058 DIRC3C9JPN6 131 aa13.2□□□□□ -0.3
ATPAF2-201ENST00000444058 MBP02144 154 aa13.2□□□□□ -0.3
ATPAF2-201ENST00000444058 Q5BKY6 102 aa13.2□□□□□ -0.3
ATPAF2-201ENST00000444058 IBA57Q5T440 356 aaKnown RBP13.2□□□□□ -0.3
ATPAF2-201ENST00000444058 LINC00336Q6ZUF6 198 aa13.2□□□□□ -0.3
ATPAF2-201ENST00000444058 INO80EQ8NBZ0 244 aaPredicted RBP13.2□□□□□ -0.3
ATPAF2-201ENST00000444058 GAGE12BA1L429 117 aa13.19□□□□□ -0.3
ATPAF2-201ENST00000444058 GAGE7O76087 117 aa13.19□□□□□ -0.3
ATPAF2-201ENST00000444058 GAGE12FP0CL80 117 aa13.19□□□□□ -0.3
ATPAF2-201ENST00000444058 GAGE12GP0CL81 117 aa13.19□□□□□ -0.3
ATPAF2-201ENST00000444058 GAGE12IP0CL82 117 aa13.19□□□□□ -0.3
ATPAF2-201ENST00000444058 PRR9Q5T870 116 aa13.19□□□□□ -0.3
ATPAF2-201ENST00000444058 HSD17B11Q8NBQ5 300 aa13.19□□□□□ -0.3
ATPAF2-201ENST00000444058 CMTM2Q8TAZ6 248 aa13.19□□□□□ -0.3
ATPAF2-201ENST00000444058 GSN-AS1Q9NRJ2 163 aa13.19□□□□□ -0.3
ATPAF2-201ENST00000444058 IGHV1OR15-1A0A075B7D0 117 aa13.18□□□□□ -0.3
ATPAF2-201ENST00000444058 PGPA6NDG6 321 aa13.18□□□□□ -0.3
ATPAF2-201ENST00000444058 H3BNG1 76 aa13.18□□□□□ -0.3
ATPAF2-201ENST00000444058 RGS13O14921 159 aa13.18□□□□□ -0.3
ATPAF2-201ENST00000444058 STAG3L2P0CL84 134 aa13.18□□□□□ -0.3
ATPAF2-201ENST00000444058 STAG3L3P0CL85 134 aa13.18□□□□□ -0.3
ATPAF2-201ENST00000444058 ATP6V0CP27449 155 aa13.18□□□□□ -0.3
ATPAF2-201ENST00000444058 CDC34P49427 236 aaPredicted RBP13.18□□□□□ -0.3
ATPAF2-201ENST00000444058 TCL1AP56279 114 aa13.18□□□□□ -0.3
ATPAF2-201ENST00000444058 Q6ZR54 194 aa13.18□□□□□ -0.3
ATPAF2-201ENST00000444058 Q8TAT8 98 aa13.18□□□□□ -0.3
ATPAF2-201ENST00000444058 Q6ZTI0 123 aa13.17□□□□□ -0.3
ATPAF2-201ENST00000444058 OR2T35Q8NGX2 323 aa13.17□□□□□ -0.3
ATPAF2-201ENST00000444058 HYLS1Q96M11 299 aa13.17□□□□□ -0.3
ATPAF2-201ENST00000444058 ATG101Q9BSB4 218 aa13.17□□□□□ -0.3
ATPAF2-201ENST00000444058 TNFSF18Q9UNG2 199 aa13.17□□□□□ -0.3
ATPAF2-201ENST00000444058 RNF222A6NCQ9 220 aa13.16□□□□□ -0.3
ATPAF2-201ENST00000444058 SPINK4O60575 86 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms