RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 HBE1P02100 147 aa12.97□□□□□ -0.33
CPSF4-205ENST00000440514 EMP1P54849 157 aa12.97□□□□□ -0.33
CPSF4-205ENST00000440514 ZNF726P1Q15940 193 aa12.97□□□□□ -0.33
CPSF4-205ENST00000440514 CMTM2Q8TAZ6 248 aa12.97□□□□□ -0.33
CPSF4-205ENST00000440514 LOC102723971A0A1B0GUV8 181 aa12.96□□□□□ -0.33
CPSF4-205ENST00000440514 ZNF705GA8MUZ8 300 aaPredicted RBP12.96□□□□□ -0.33
CPSF4-205ENST00000440514 PRM2P04554 102 aa12.96□□□□□ -0.33
CPSF4-205ENST00000440514 GCHFRP30047 84 aa12.96□□□□□ -0.33
CPSF4-205ENST00000440514 LEPP41159 167 aa12.96□□□□□ -0.33
CPSF4-205ENST00000440514 ZFP69Q49AA0 526 aa12.96□□□□□ -0.33
CPSF4-205ENST00000440514 GFI1BQ5VTD9 330 aa12.96□□□□□ -0.33
CPSF4-205ENST00000440514 VGLL1Q99990 258 aa12.96□□□□□ -0.33
CPSF4-205ENST00000440514 NKX6-2Q9C056 277 aaPredicted RBP12.96□□□□□ -0.33
CPSF4-205ENST00000440514 AGPAT4-IT1Q9H0P7 198 aa12.96□□□□□ -0.33
CPSF4-205ENST00000440514 OTORQ9NRC9 128 aa12.96□□□□□ -0.33
CPSF4-205ENST00000440514 SERTM2A0A1B0GWG4 89 aa12.95□□□□□ -0.34
CPSF4-205ENST00000440514 RBAKDNA6NC62 111 aa12.95□□□□□ -0.34
CPSF4-205ENST00000440514 SLC25A5P05141 298 aaKnown RBP12.95□□□□□ -0.34
CPSF4-205ENST00000440514 RAB5CP51148 216 aa12.95□□□□□ -0.34
CPSF4-205ENST00000440514 RRN3P1Q2M238 152 aa12.95□□□□□ -0.34
CPSF4-205ENST00000440514 LGALSLQ3ZCW2 172 aaPredicted RBP12.95□□□□□ -0.34
CPSF4-205ENST00000440514 ZNF767PQ75MW2 155 aa12.95□□□□□ -0.34
CPSF4-205ENST00000440514 TMEM256Q8N2U0 113 aa12.95□□□□□ -0.34
CPSF4-205ENST00000440514 C20orf144Q9BQM9 153 aa12.95□□□□□ -0.34
CPSF4-205ENST00000440514 RPH3ALQ9UNE2 315 aa12.95□□□□□ -0.34
CPSF4-205ENST00000440514 KMT2CQ8NEZ4 4911 aaKnown RBP12.95□□□□□ -0.34
CPSF4-205ENST00000440514 TRBV7-9A0A0J9YWB2 115 aa12.94□□□□□ -0.34
CPSF4-205ENST00000440514 TMEM189A5PLL7 270 aa12.94□□□□□ -0.34
CPSF4-205ENST00000440514 NMBP08949 121 aa12.94□□□□□ -0.34
CPSF4-205ENST00000440514 TMEM78Q5T7P6 136 aa12.94□□□□□ -0.34
CPSF4-205ENST00000440514 C9orf47Q6ZRZ4 202 aa12.94□□□□□ -0.34
CPSF4-205ENST00000440514 SLC51BQ86UW2 128 aa12.94□□□□□ -0.34
CPSF4-205ENST00000440514 IQCF2Q8IXL9 164 aa12.94□□□□□ -0.34
CPSF4-205ENST00000440514 Q8TAT8 98 aa12.94□□□□□ -0.34
CPSF4-205ENST00000440514 PHLDA1Q8WV24 401 aaPredicted RBP12.94□□□□□ -0.34
CPSF4-205ENST00000440514 FAM19A4Q96LR4 140 aa12.94□□□□□ -0.34
CPSF4-205ENST00000440514 DYNC2H1Q8NCM8 4307 aaKnown RBP12.94□□□□□ -0.34
CPSF4-205ENST00000440514 PGPA6NDG6 321 aa12.93□□□□□ -0.34
CPSF4-205ENST00000440514 NUPR2A6NF83 97 aa12.93□□□□□ -0.34
CPSF4-205ENST00000440514 TEX46H3BTG2 121 aa12.93□□□□□ -0.34
CPSF4-205ENST00000440514 K7EQM0 130 aa12.93□□□□□ -0.34
CPSF4-205ENST00000440514 CEMP1Q6PRD7 247 aaPredicted RBP12.93□□□□□ -0.34
CPSF4-205ENST00000440514 SUN5Q8TC36 379 aa12.93□□□□□ -0.34
CPSF4-205ENST00000440514 LINC01587Q99440 93 aa12.93□□□□□ -0.34
CPSF4-205ENST00000440514 A0A1B0GVG6 124 aa12.92□□□□□ -0.34
CPSF4-205ENST00000440514 FBLL1A6NHQ2 334 aaKnown RBP12.92□□□□□ -0.34
CPSF4-205ENST00000440514 DIRC3C9JPN6 131 aa12.92□□□□□ -0.34
CPSF4-205ENST00000440514 GNG5P63218 68 aa12.92□□□□□ -0.34
CPSF4-205ENST00000440514 Q6ZTC4 211 aa12.92□□□□□ -0.34
CPSF4-205ENST00000440514 PLA2G2EQ9NZK7 142 aa12.92□□□□□ -0.34
CPSF4-205ENST00000440514 YTHDF2Q9Y5A9 579 aaKnown RBP12.92□□□□□ -0.34
CPSF4-205ENST00000440514 TRAV12-3A0A0B4J271 114 aa12.91□□□□□ -0.34
CPSF4-205ENST00000440514 TEX48A0A1B0GUV7 120 aa12.91□□□□□ -0.34
CPSF4-205ENST00000440514 A0A1W2PRE2 83 aa12.91□□□□□ -0.34
CPSF4-205ENST00000440514 HTN1P15515 57 aa12.91□□□□□ -0.34
CPSF4-205ENST00000440514 AZU1P20160 251 aa12.91□□□□□ -0.34
CPSF4-205ENST00000440514 PPT1P50897 306 aa12.91□□□□□ -0.34
CPSF4-205ENST00000440514 FGF8P55075 233 aaPredicted RBP12.91□□□□□ -0.34
CPSF4-205ENST00000440514 CD300CQ08708 224 aa12.91□□□□□ -0.34
CPSF4-205ENST00000440514 BTN1A1Q13410 526 aa12.91□□□□□ -0.34
CPSF4-205ENST00000440514 PRR9Q5T870 116 aa12.91□□□□□ -0.34
CPSF4-205ENST00000440514 FAM222AQ5U5X8 452 aa12.91□□□□□ -0.34
CPSF4-205ENST00000440514 TMED6Q8WW62 240 aa12.91□□□□□ -0.34
CPSF4-205ENST00000440514 ZNF492Q9P255 531 aa12.91□□□□□ -0.34
CPSF4-205ENST00000440514 LENEPQ9Y5L5 61 aa12.91□□□□□ -0.34
CPSF4-205ENST00000440514 C7orf71A4D174 169 aa12.9□□□□□ -0.34
CPSF4-205ENST00000440514 KLLNB2CW77 178 aa12.9□□□□□ -0.34
CPSF4-205ENST00000440514 H7BYZ3 331 aa12.9□□□□□ -0.34
CPSF4-205ENST00000440514 CRISP2P16562 243 aa12.9□□□□□ -0.34
CPSF4-205ENST00000440514 FHITP49789 147 aa12.9□□□□□ -0.34
CPSF4-205ENST00000440514 ZNF138P52744 262 aa12.9□□□□□ -0.34
CPSF4-205ENST00000440514 TAS2R60P59551 318 aa12.9□□□□□ -0.34
CPSF4-205ENST00000440514 C12orf74Q32Q52 190 aa12.9□□□□□ -0.34
CPSF4-205ENST00000440514 GOLT1AQ6ZVE7 132 aa12.9□□□□□ -0.34
CPSF4-205ENST00000440514 ZFAND2AQ8N6M9 145 aa12.9□□□□□ -0.34
CPSF4-205ENST00000440514 TCEAL7Q9BRU2 100 aa12.9□□□□□ -0.34
CPSF4-205ENST00000440514 TMPRSS5Q9H3S3 457 aa12.9□□□□□ -0.34
CPSF4-205ENST00000440514 PLAC8L1A1L4L8 177 aa12.89□□□□□ -0.35
CPSF4-205ENST00000440514 MAP1LC3B2A6NCE7 125 aa12.89□□□□□ -0.35
CPSF4-205ENST00000440514 GGTLC3B5MD39 225 aa12.89□□□□□ -0.35
CPSF4-205ENST00000440514 SPART-AS1P0CW21 52 aa12.89□□□□□ -0.35
CPSF4-205ENST00000440514 RNASE4P34096 147 aaKnown RBP12.89□□□□□ -0.35
CPSF4-205ENST00000440514 C5orf17Q8NAS9 161 aa12.89□□□□□ -0.35
CPSF4-205ENST00000440514 MAP1LC3BQ9GZQ8 125 aa12.89□□□□□ -0.35
CPSF4-205ENST00000440514 DKK2Q9UBU2 259 aa12.89□□□□□ -0.35
CPSF4-205ENST00000440514 ARL2-SNX15V9GYD0 113 aa12.89□□□□□ -0.35
CPSF4-205ENST00000440514 GPX1P07203 203 aa12.88□□□□□ -0.35
CPSF4-205ENST00000440514 NIPSNAP3BQ9BS92 247 aa12.88□□□□□ -0.35
CPSF4-205ENST00000440514 TENM2Q9NT68 2774 aa12.88□□□□□ -0.35
CPSF4-205ENST00000440514 TRAV8-1A0A0A6YYK1 113 aa12.87□□□□□ -0.35
CPSF4-205ENST00000440514 F6UZH7 168 aa12.87□□□□□ -0.35
CPSF4-205ENST00000440514 H2AFB1P0C5Y9 115 aa12.87□□□□□ -0.35
CPSF4-205ENST00000440514 UBE2G2P60604 165 aa12.87□□□□□ -0.35
CPSF4-205ENST00000440514 FAM213BQ8TBF2 198 aa12.87□□□□□ -0.35
CPSF4-205ENST00000440514 MBD3L1Q8WWY6 194 aa12.87□□□□□ -0.35
CPSF4-205ENST00000440514 C16orf74Q96GX8 76 aa12.87□□□□□ -0.35
CPSF4-205ENST00000440514 KLK5Q9Y337 293 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-205ENST00000440514 ALMS1Q8TCU4 4167 aa12.87□□□□□ -0.35
CPSF4-205ENST00000440514 LCE6AA0A183 80 aa12.86□□□□□ -0.35
CPSF4-205ENST00000440514 SUMO1P63165 101 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms