RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 FAT2Q9NYQ8 4349 aa11.49□□□□□ -0.57
ITGB1-207ENST00000439974 KIAA1109Q2LD37 5005 aa11.48□□□□□ -0.57
ITGB1-207ENST00000439974 ZNF705GA8MUZ8 300 aaPredicted RBP11.48□□□□□ -0.57
ITGB1-207ENST00000439974 INSP01308 110 aa11.48□□□□□ -0.57
ITGB1-207ENST00000439974 CD300CQ08708 224 aa11.48□□□□□ -0.57
ITGB1-207ENST00000439974 HYLS1Q96M11 299 aa11.48□□□□□ -0.57
ITGB1-207ENST00000439974 VGLL1Q99990 258 aa11.48□□□□□ -0.57
ITGB1-207ENST00000439974 RPH3ALQ9UNE2 315 aa11.48□□□□□ -0.57
ITGB1-207ENST00000439974 SMIM9A6NGZ8 99 aa11.47□□□□□ -0.57
ITGB1-207ENST00000439974 HMSDA8MTL9 139 aa11.47□□□□□ -0.57
ITGB1-207ENST00000439974 NPIPB6E9PJ23 425 aa11.47□□□□□ -0.57
ITGB1-207ENST00000439974 TAAR5O14804 337 aa11.47□□□□□ -0.57
ITGB1-207ENST00000439974 SERF2P84101 59 aa11.47□□□□□ -0.57
ITGB1-207ENST00000439974 ZNF726P1Q15940 193 aa11.47□□□□□ -0.57
ITGB1-207ENST00000439974 MRPL53Q96EL3 112 aaKnown RBP11.47□□□□□ -0.57
ITGB1-207ENST00000439974 AGPAT4-IT1Q9H0P7 198 aa11.47□□□□□ -0.57
ITGB1-207ENST00000439974 PLA2G2EQ9NZK7 142 aa11.47□□□□□ -0.57
ITGB1-207ENST00000439974 PRELID1Q9Y255 219 aa11.47□□□□□ -0.57
ITGB1-207ENST00000439974 TMEM189A5PLL7 270 aa11.46□□□□□ -0.57
ITGB1-207ENST00000439974 MBP02144 154 aa11.46□□□□□ -0.57
ITGB1-207ENST00000439974 STAG3L2P0CL84 134 aa11.46□□□□□ -0.57
ITGB1-207ENST00000439974 STAG3L3P0CL85 134 aa11.46□□□□□ -0.57
ITGB1-207ENST00000439974 HTN1P15515 57 aa11.46□□□□□ -0.57
ITGB1-207ENST00000439974 ZNF345Q14585 488 aa11.46□□□□□ -0.57
ITGB1-207ENST00000439974 PQLC2Q6ZP29 291 aa11.46□□□□□ -0.57
ITGB1-207ENST00000439974 TMUB2Q71RG4 321 aa11.46□□□□□ -0.57
ITGB1-207ENST00000439974 IQCF2Q8IXL9 164 aa11.46□□□□□ -0.57
ITGB1-207ENST00000439974 NDUFAF3Q9BU61 184 aa11.46□□□□□ -0.57
ITGB1-207ENST00000439974 ZNF471Q9BX82 626 aaPredicted RBP11.46□□□□□ -0.57
ITGB1-207ENST00000439974 ACTR3CQ9C0K3 210 aaPredicted RBP11.46□□□□□ -0.57
ITGB1-207ENST00000439974 PGPA6NDG6 321 aa11.45□□□□□ -0.58
ITGB1-207ENST00000439974 BCL2L11O43521 198 aa11.45□□□□□ -0.58
ITGB1-207ENST00000439974 SPART-AS1P0CW21 52 aa11.45□□□□□ -0.58
ITGB1-207ENST00000439974 GCHFRP30047 84 aa11.45□□□□□ -0.58
ITGB1-207ENST00000439974 CDKN1BP46527 198 aa11.45□□□□□ -0.58
ITGB1-207ENST00000439974 FGF8P55075 233 aaPredicted RBP11.45□□□□□ -0.58
ITGB1-207ENST00000439974 GNG5P63218 68 aa11.45□□□□□ -0.58
ITGB1-207ENST00000439974 AKR1C8PQ5T2L2 129 aa11.45□□□□□ -0.58
ITGB1-207ENST00000439974 GFI1BQ5VTD9 330 aa11.45□□□□□ -0.58
ITGB1-207ENST00000439974 TCTE3Q8IZS6 198 aa11.45□□□□□ -0.58
ITGB1-207ENST00000439974 Q8TAT8 98 aa11.45□□□□□ -0.58
ITGB1-207ENST00000439974 LINC01587Q99440 93 aa11.45□□□□□ -0.58
ITGB1-207ENST00000439974 TMPRSS5Q9H3S3 457 aa11.45□□□□□ -0.58
ITGB1-207ENST00000439974 DYNC1H1Q14204 4646 aaKnown RBP11.44□□□□□ -0.58
ITGB1-207ENST00000439974 A0A0D9SG52 128 aa11.44□□□□□ -0.58
ITGB1-207ENST00000439974 TEX48A0A1B0GUV7 120 aa11.44□□□□□ -0.58
ITGB1-207ENST00000439974 LOC102723971A0A1B0GUV8 181 aa11.44□□□□□ -0.58
ITGB1-207ENST00000439974 KANTRA0A1W2PQU2 76 aa11.44□□□□□ -0.58
ITGB1-207ENST00000439974 PFDN1O60925 122 aa11.44□□□□□ -0.58
ITGB1-207ENST00000439974 HBE1P02100 147 aa11.44□□□□□ -0.58
ITGB1-207ENST00000439974 P0DMU3 169 aa11.44□□□□□ -0.58
ITGB1-207ENST00000439974 FAM231AP0DMU4 169 aa11.44□□□□□ -0.58
ITGB1-207ENST00000439974 FAM231CP0DMU5 169 aa11.44□□□□□ -0.58
ITGB1-207ENST00000439974 AZU1P20160 251 aa11.44□□□□□ -0.58
ITGB1-207ENST00000439974 FHITP49789 147 aa11.44□□□□□ -0.58
ITGB1-207ENST00000439974 TRAV12-3A0A0B4J271 114 aa11.43□□□□□ -0.58
ITGB1-207ENST00000439974 LEPP41159 167 aa11.43□□□□□ -0.58
ITGB1-207ENST00000439974 CSN1S1P47710 185 aa11.43□□□□□ -0.58
ITGB1-207ENST00000439974 RRN3P1Q2M238 152 aa11.43□□□□□ -0.58
ITGB1-207ENST00000439974 Q6ZQT7 251 aa11.43□□□□□ -0.58
ITGB1-207ENST00000439974 AKAP14Q86UN6 197 aa11.43□□□□□ -0.58
ITGB1-207ENST00000439974 POM121L12Q8N7R1 296 aa11.43□□□□□ -0.58
ITGB1-207ENST00000439974 OTORQ9NRC9 128 aa11.43□□□□□ -0.58
ITGB1-207ENST00000439974 DNAH11Q96DT5 4516 aa11.42□□□□□ -0.58
ITGB1-207ENST00000439974 DIRC3C9JPN6 131 aa11.42□□□□□ -0.58
ITGB1-207ENST00000439974 TSPOP30536 169 aa11.42□□□□□ -0.58
ITGB1-207ENST00000439974 BTN1A1Q13410 526 aa11.42□□□□□ -0.58
ITGB1-207ENST00000439974 LGALSLQ3ZCW2 172 aaPredicted RBP11.42□□□□□ -0.58
ITGB1-207ENST00000439974 TMEM78Q5T7P6 136 aa11.42□□□□□ -0.58
ITGB1-207ENST00000439974 PRR9Q5T870 116 aa11.42□□□□□ -0.58
ITGB1-207ENST00000439974 C9orf47Q6ZRZ4 202 aa11.42□□□□□ -0.58
ITGB1-207ENST00000439974 LINC00336Q6ZUF6 198 aa11.42□□□□□ -0.58
ITGB1-207ENST00000439974 LYPD1Q8N2G4 141 aa11.42□□□□□ -0.58
ITGB1-207ENST00000439974 DKK2Q9UBU2 259 aa11.42□□□□□ -0.58
ITGB1-207ENST00000439974 CTXND1A0A1B0GTU2 59 aa11.41□□□□□ -0.58
ITGB1-207ENST00000439974 A0A1B0GV50 99 aa11.41□□□□□ -0.58
ITGB1-207ENST00000439974 CXorf1O96002 111 aa11.41□□□□□ -0.58
ITGB1-207ENST00000439974 RNASE4P34096 147 aaKnown RBP11.41□□□□□ -0.58
ITGB1-207ENST00000439974 UBE2G2P60604 165 aa11.41□□□□□ -0.58
ITGB1-207ENST00000439974 FAM222AQ5U5X8 452 aa11.41□□□□□ -0.58
ITGB1-207ENST00000439974 GOLT1AQ6ZVE7 132 aa11.41□□□□□ -0.58
ITGB1-207ENST00000439974 CMTM2Q8TAZ6 248 aa11.41□□□□□ -0.58
ITGB1-207ENST00000439974 FAM210BQ96KR6 192 aa11.41□□□□□ -0.58
ITGB1-207ENST00000439974 FAM19A4Q96LR4 140 aa11.41□□□□□ -0.58
ITGB1-207ENST00000439974 SGK494Q96LW2 274 aa11.41□□□□□ -0.58
ITGB1-207ENST00000439974 LINC00477Q96M19 166 aa11.41□□□□□ -0.58
ITGB1-207ENST00000439974 NIPSNAP3BQ9BS92 247 aa11.41□□□□□ -0.58
ITGB1-207ENST00000439974 YTHDF2Q9Y5A9 579 aaKnown RBP11.41□□□□□ -0.58
ITGB1-207ENST00000439974 PKHD1P08F94 4074 aa11.4□□□□□ -0.58
ITGB1-207ENST00000439974 TRAV8-1A0A0A6YYK1 113 aa11.4□□□□□ -0.58
ITGB1-207ENST00000439974 C1QBP02746 253 aa11.4□□□□□ -0.58
ITGB1-207ENST00000439974 SLC25A5P05141 298 aaKnown RBP11.4□□□□□ -0.58
ITGB1-207ENST00000439974 TMED6Q8WW62 240 aa11.4□□□□□ -0.58
ITGB1-207ENST00000439974 ODF3Q96PU9 254 aa11.4□□□□□ -0.58
ITGB1-207ENST00000439974 ZNF492Q9P255 531 aa11.4□□□□□ -0.58
ITGB1-207ENST00000439974 C7orf71A4D174 169 aa11.39□□□□□ -0.59
ITGB1-207ENST00000439974 MAP1LC3B2A6NCE7 125 aa11.39□□□□□ -0.59
ITGB1-207ENST00000439974 GGTLC3B5MD39 225 aa11.39□□□□□ -0.59
ITGB1-207ENST00000439974 ZNF138P52744 262 aa11.39□□□□□ -0.59
ITGB1-207ENST00000439974 ZFAND2AQ8N6M9 145 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms