RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 ANK3Q12955 4377 aaKnown RBP6.74□□□□□ -1.33
HPS4-206ENST00000439453 SHISA9B4DS77 424 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 PRSS1P07477 247 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 TNFRSF1AP19438 455 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 FXYD2P54710 66 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 LYZP61626 148 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 ORMDL3Q8N138 153 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 DKK2Q9UBU2 259 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 PPIAL4EA0A075B759 164 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 PPIAL4FP0DN26 164 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 BMI1P35226 326 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 CRIP1P50238 77 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 FAM104BQ5XKR9 115 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 PVRIGQ6DKI7 326 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 AMN1Q8IY45 258 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 TMEM75Q8N9X5 138 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 SVIPQ8NHG7 77 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 VGLL1Q99990 258 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 SMPXQ9UHP9 88 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 TMEM213A2RRL7 107 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 K7EQM0 130 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 NDUFS7O75251 213 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 PRB4P10163 310 aaPredicted RBP6.74□□□□□ -1.33
HPS4-206ENST00000439453 PAX8Q06710 450 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 VMA21Q3ZAQ7 101 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 SLC25A39Q9BZJ4 359 aaPredicted RBP6.74□□□□□ -1.33
HPS4-206ENST00000439453 PSG8Q9UQ74 426 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 CUBNO60494 3623 aa6.74□□□□□ -1.33
HPS4-206ENST00000439453 M0R1B8 84 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 CCL3L1P16619 93 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 TNFAIP6P98066 277 aaPredicted RBP6.73□□□□□ -1.33
HPS4-206ENST00000439453 BSPH1Q075Z2 132 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 CD300EQ496F6 205 aaPredicted RBP6.73□□□□□ -1.33
HPS4-206ENST00000439453 C18orf15Q96N68 181 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 TSSC4Q9Y5U2 329 aaPredicted RBP6.73□□□□□ -1.33
HPS4-206ENST00000439453 GAGE12HA6NDE8 117 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 K7ERJ3 54 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 ENSAO43768 121 aaKnown RBP6.73□□□□□ -1.33
HPS4-206ENST00000439453 APELAP0DMC3 54 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 GLRXP35754 106 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 MRGPRG-AS1Q2M3A8 158 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 LYZL1Q6UWQ5 148 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 FAM169BQ8N8A8 192 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 RITA1Q96K30 269 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 HIGD1BQ9P298 99 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 SPG11Q96JI7 2443 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 MRPL51Q4U2R6 128 aaKnown RBP6.73□□□□□ -1.33
HPS4-206ENST00000439453 WFDC3Q8IUB2 231 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 KRTAP1-3Q8IUG1 177 aa6.73□□□□□ -1.33
HPS4-206ENST00000439453 PHLDA1Q8WV24 401 aaPredicted RBP6.72□□□□□ -1.33
HPS4-206ENST00000439453 C17orf77Q96MU5 243 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 PLGLAQ15195 96 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 C3orf36Q3SXR2 165 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 PIFOQ8TCI5 191 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 ATP6V0BQ99437 205 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 CHAC1Q9BUX1 264 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 SPANXB1Q9NS25 103 aaPredicted RBP6.72□□□□□ -1.33
HPS4-206ENST00000439453 IGLV3-9A0A075B6K5 115 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 TRBV19A0A075B6N1 114 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 TMSB15BA0A087X1C1 80 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 IGKV2D-26A0A0A0MRZ7 120 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 WI2-2373I1.2A0A1W2PRP0 233 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 IGHV1-46P01743 117 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 C8orf49Q96NF6 230 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 CLUHP3Q96NS8 147 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 TTTY13Q9BZ97 58 aa6.72□□□□□ -1.33
HPS4-206ENST00000439453 SMKR1H3BMG3 65 aa6.71□□□□□ -1.33
HPS4-206ENST00000439453 NPYP01303 97 aa6.71□□□□□ -1.33
HPS4-206ENST00000439453 CD40P25942 277 aa6.71□□□□□ -1.33
HPS4-206ENST00000439453 RPL27AP46776 148 aaKnown RBP6.71□□□□□ -1.33
HPS4-206ENST00000439453 WFDC2Q14508 124 aa6.71□□□□□ -1.33
HPS4-206ENST00000439453 NGBQ9NPG2 151 aa6.71□□□□□ -1.33
HPS4-206ENST00000439453 CKS2P33552 79 aa6.71□□□□□ -1.34
HPS4-206ENST00000439453 TMEM200BQ69YZ2 307 aa6.71□□□□□ -1.34
HPS4-206ENST00000439453 FOXI2Q6ZQN5 318 aa6.71□□□□□ -1.34
HPS4-206ENST00000439453 NHP2Q9NX24 153 aaKnown RBP6.71□□□□□ -1.34
HPS4-206ENST00000439453 ZNF672Q499Z4 452 aaPredicted RBP6.71□□□□□ -1.34
HPS4-206ENST00000439453 TEX36Q5VZQ5 186 aa6.71□□□□□ -1.34
HPS4-206ENST00000439453 SIGLEC15Q6ZMC9 328 aa6.71□□□□□ -1.34
HPS4-206ENST00000439453 CR1P17927 2039 aa6.71□□□□□ -1.34
HPS4-206ENST00000439453 E7EQL1 145 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 F8W1H4 67 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 PSMG4Q5JS54 123 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 C11orf71Q6IPW1 123 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 TMEM190Q8WZ59 177 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 SPATA25Q9BR10 227 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 TMEM133Q9H2Q1 129 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 ZANQ9Y493 2812 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 NAV2Q8IVL1 2488 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 IGHV3-72A0A0B4J1Y9 119 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 A0A1W2PRD5 423 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 A0A1W2PRF3 423 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 A0A1W2PRM7 423 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 E9PLD3 99 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 CCDC144NLQ6NUI1 221 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 ZMAT4Q9H898 229 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 HHLA3Q9XRX5 114 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 ITPR3Q14573 2671 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 MYO9AB2RTY4 2548 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 RBP4P02753 201 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms