RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ZNF705DP0CH99 300 aaPredicted RBP15.36■□□□□ 0.05
CHD3-204ENST00000439235 ZNF705BP0CI00 300 aaPredicted RBP15.36■□□□□ 0.05
CHD3-204ENST00000439235 HLA-DRB4P13762 266 aa15.36■□□□□ 0.05
CHD3-204ENST00000439235 ERCC8Q13216 396 aa15.36■□□□□ 0.05
CHD3-204ENST00000439235 FAM74A3Q4VXF1 159 aa15.36■□□□□ 0.05
CHD3-204ENST00000439235 ACTL10Q5JWF8 245 aa15.36■□□□□ 0.05
CHD3-204ENST00000439235 Q86TA4 180 aa15.36■□□□□ 0.05
CHD3-204ENST00000439235 SMIM7Q9BQ49 75 aa15.36■□□□□ 0.05
CHD3-204ENST00000439235 C19orf73Q9NVV2 129 aa15.36■□□□□ 0.05
CHD3-204ENST00000439235 PSG8Q9UQ74 426 aa15.36■□□□□ 0.05
CHD3-204ENST00000439235 HLA-DRB4X5D2U9 266 aa15.36■□□□□ 0.05
CHD3-204ENST00000439235 ZNF727A8MUV8 499 aa15.35■□□□□ 0.05
CHD3-204ENST00000439235 IGLV2-11P01706 119 aa15.35■□□□□ 0.05
CHD3-204ENST00000439235 ZNF138P52744 262 aa15.35■□□□□ 0.05
CHD3-204ENST00000439235 GDF5OSQ5U4N7 250 aa15.35■□□□□ 0.05
CHD3-204ENST00000439235 NDFIP1Q9BT67 221 aa15.35■□□□□ 0.05
CHD3-204ENST00000439235 AGPAT4-IT1Q9H0P7 198 aa15.35■□□□□ 0.05
CHD3-204ENST00000439235 ZNF124Q15973 351 aa15.34■□□□□ 0.05
CHD3-204ENST00000439235 PRNTQ86SH4 94 aa15.34■□□□□ 0.05
CHD3-204ENST00000439235 STHQ8IWL8 128 aa15.34■□□□□ 0.05
CHD3-204ENST00000439235 SGK494Q96LW2 274 aa15.34■□□□□ 0.05
CHD3-204ENST00000439235 PPP1R14DQ9NXH3 145 aa15.34■□□□□ 0.05
CHD3-204ENST00000439235 LENEPQ9Y5L5 61 aa15.34■□□□□ 0.05
CHD3-204ENST00000439235 C9JCJ5 164 aa15.33■□□□□ 0.04
CHD3-204ENST00000439235 H3BMM0 161 aa15.33■□□□□ 0.04
CHD3-204ENST00000439235 GNG4P50150 75 aa15.33■□□□□ 0.04
CHD3-204ENST00000439235 CENPWQ5EE01 88 aa15.33■□□□□ 0.04
CHD3-204ENST00000439235 OR4B1Q8NGF8 309 aa15.33■□□□□ 0.04
CHD3-204ENST00000439235 Q8TAT8 98 aa15.33■□□□□ 0.04
CHD3-204ENST00000439235 ODF3Q96PU9 254 aa15.33■□□□□ 0.04
CHD3-204ENST00000439235 PRR25Q96S07 402 aa15.33■□□□□ 0.04
CHD3-204ENST00000439235 ZNF492Q9P255 531 aa15.33■□□□□ 0.04
CHD3-204ENST00000439235 ZFP30Q9Y2G7 519 aa15.33■□□□□ 0.04
CHD3-204ENST00000439235 F8W036 122 aa15.32■□□□□ 0.04
CHD3-204ENST00000439235 LTAP01374 205 aa15.32■□□□□ 0.04
CHD3-204ENST00000439235 KRTAP10-11P60412 298 aa15.32■□□□□ 0.04
CHD3-204ENST00000439235 SAPCD1Q5SSQ6 148 aa15.32■□□□□ 0.04
CHD3-204ENST00000439235 IGF2BP2-AS1Q96M15 143 aa15.32■□□□□ 0.04
CHD3-204ENST00000439235 CLUHP3Q96NS8 147 aa15.32■□□□□ 0.04
CHD3-204ENST00000439235 WFDC10AQ9H1F0 79 aa15.32■□□□□ 0.04
CHD3-204ENST00000439235 VWFP04275 2813 aa15.32■□□□□ 0.04
CHD3-204ENST00000439235 TRBV7-9A0A0J9YWB2 115 aa15.31■□□□□ 0.04
CHD3-204ENST00000439235 A8MTW9 85 aa15.31■□□□□ 0.04
CHD3-204ENST00000439235 BAGE2Q86Y30 109 aa15.31■□□□□ 0.04
CHD3-204ENST00000439235 SMIM12Q96EX1 92 aa15.31■□□□□ 0.04
CHD3-204ENST00000439235 NIPSNAP3BQ9BS92 247 aa15.31■□□□□ 0.04
CHD3-204ENST00000439235 KRBOX1C9JBD0 128 aa15.3■□□□□ 0.04
CHD3-204ENST00000439235 IGKV3-20P01619 116 aa15.3■□□□□ 0.04
CHD3-204ENST00000439235 CT45A10P0DMU9 189 aa15.3■□□□□ 0.04
CHD3-204ENST00000439235 TRPT1Q86TN4 253 aaKnown RBP15.3■□□□□ 0.04
CHD3-204ENST00000439235 Q8N1Y9 231 aa15.3■□□□□ 0.04
CHD3-204ENST00000439235 DEFB125Q8N687 156 aa15.3■□□□□ 0.04
CHD3-204ENST00000439235 SEC11CQ9BY50 192 aa15.3■□□□□ 0.04
CHD3-204ENST00000439235 NAT8Q9UHE5 227 aa15.3■□□□□ 0.04
CHD3-204ENST00000439235 TRBV20OR9-2A0A075B6H5 130 aa15.29■□□□□ 0.04
CHD3-204ENST00000439235 TSPOP30536 169 aa15.29■□□□□ 0.04
CHD3-204ENST00000439235 LEPP41159 167 aa15.29■□□□□ 0.04
CHD3-204ENST00000439235 TMEM183AQ8IXX5 376 aa15.29■□□□□ 0.04
CHD3-204ENST00000439235 SRD5A3Q9H8P0 318 aa15.29■□□□□ 0.04
CHD3-204ENST00000439235 LY96Q9Y6Y9 160 aa15.29■□□□□ 0.04
CHD3-204ENST00000439235 ADCYAP1P18509 176 aa15.28■□□□□ 0.04
CHD3-204ENST00000439235 TMEM241Q24JQ0 296 aa15.28■□□□□ 0.04
CHD3-204ENST00000439235 KPRPQ5T749 579 aaPredicted RBP15.28■□□□□ 0.04
CHD3-204ENST00000439235 FAM19A4Q96LR4 140 aa15.28■□□□□ 0.04
CHD3-204ENST00000439235 CRISP2P16562 243 aa15.27■□□□□ 0.04
CHD3-204ENST00000439235 NUTF2P61970 127 aaKnown RBP15.27■□□□□ 0.04
CHD3-204ENST00000439235 AMTNQ6UX39 209 aa15.27■□□□□ 0.04
CHD3-204ENST00000439235 TRRAPQ9Y4A5 3859 aa15.26■□□□□ 0.03
CHD3-204ENST00000439235 SMUG1Q53HV7 270 aa15.26■□□□□ 0.03
CHD3-204ENST00000439235 NHLRC2Q8NBF2 726 aa15.26■□□□□ 0.03
CHD3-204ENST00000439235 TVP23CQ96ET8 276 aa15.26■□□□□ 0.03
CHD3-204ENST00000439235 ASCL2Q99929 193 aa15.26■□□□□ 0.03
CHD3-204ENST00000439235 MLST8Q9BVC4 326 aa15.26■□□□□ 0.03
CHD3-204ENST00000439235 BIN3Q9NQY0 253 aa15.26■□□□□ 0.03
CHD3-204ENST00000439235 CARHSP1Q9Y2V2 147 aaKnown RBP15.26■□□□□ 0.03
CHD3-204ENST00000439235 RBMY1BA6NDE4 496 aaKnown RBP15.25■□□□□ 0.03
CHD3-204ENST00000439235 RBMY1EA6NEQ0 496 aaKnown RBP15.25■□□□□ 0.03
CHD3-204ENST00000439235 PGPEP1LA6NFU8 196 aa15.25■□□□□ 0.03
CHD3-204ENST00000439235 IGLV2-8P01709 118 aa15.25■□□□□ 0.03
CHD3-204ENST00000439235 AMBPP02760 352 aa15.25■□□□□ 0.03
CHD3-204ENST00000439235 RBMY1DP0C7P1 496 aaKnown RBP15.25■□□□□ 0.03
CHD3-204ENST00000439235 MGST1P10620 155 aaKnown RBP15.25■□□□□ 0.03
CHD3-204ENST00000439235 CDKN1BP46527 198 aa15.25■□□□□ 0.03
CHD3-204ENST00000439235 PNRC1Q12796 327 aaPredicted RBP15.25■□□□□ 0.03
CHD3-204ENST00000439235 C10orf91Q5T1B1 145 aa15.25■□□□□ 0.03
CHD3-204ENST00000439235 MORN3Q6PF18 240 aaPredicted RBP15.25■□□□□ 0.03
CHD3-204ENST00000439235 COX8CQ7Z4L0 72 aa15.25■□□□□ 0.03
CHD3-204ENST00000439235 C8orf49Q96NF6 230 aa15.25■□□□□ 0.03
CHD3-204ENST00000439235 TUBA4BQ9H853 241 aa15.25■□□□□ 0.03
CHD3-204ENST00000439235 SPINK13Q1W4C9 94 aa15.24■□□□□ 0.03
CHD3-204ENST00000439235 LINC01551Q86U37 167 aa15.24■□□□□ 0.03
CHD3-204ENST00000439235 ZFAND2AQ8N6M9 145 aa15.24■□□□□ 0.03
CHD3-204ENST00000439235 OCC1Q8TAD7 63 aa15.24■□□□□ 0.03
CHD3-204ENST00000439235 SDF2L1Q9HCN8 221 aa15.24■□□□□ 0.03
CHD3-204ENST00000439235 KLLNB2CW77 178 aa15.23■□□□□ 0.03
CHD3-204ENST00000439235 GPX1P07203 203 aa15.23■□□□□ 0.03
CHD3-204ENST00000439235 RPL35AP18077 110 aaKnown RBP15.23■□□□□ 0.03
CHD3-204ENST00000439235 ADIRFQ15847 76 aa15.23■□□□□ 0.03
CHD3-204ENST00000439235 LOC102724200A0A096LPH7 203 aaPredicted RBP15.22■□□□□ 0.03
CHD3-204ENST00000439235 M0R2Z0 102 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms